EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000015575 (Gene tree)
Gene ID: 100484309
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 44212 bases
Position: chrGL194306.1:219888-264099
Accession: 100484309
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000016457	DUF1604	PF07713.13	7.8e-36	1	1
ENSAMEP00000016457	G-patch	PF01585.23	2.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000017137	GPATCH1-201	2799	XM_002929731	ENSAMEP00000016457	932 (aa)	XP_002929777	G1MAT3

Gene Model

Click here to download ENSAMEG00000015575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000015575's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000015575	GPATCH1	100	89.496	ENSG00000076650	GPATCH1	100	89.496	Homo_sapiens
ENSAMEG00000015575	GPATCH1	81	70.718	ENSAOCG00000006668	gpatch1	80	70.718	Amphiprion_ocellaris
ENSAMEG00000015575	GPATCH1	81	54.226	ENSAPEG00000000026	gpatch1	90	51.903	Amphiprion_percula
ENSAMEG00000015575	GPATCH1	81	52.513	ENSATEG00000014494	gpatch1	90	51.584	Anabas_testudineus
ENSAMEG00000015575	GPATCH1	90	60.268	ENSAPLG00000007584	GPATCH1	96	61.345	Anas_platyrhynchos
ENSAMEG00000015575	GPATCH1	100	88.960	ENSANAG00000027002	GPATCH1	100	88.960	Aotus_nancymaae
ENSAMEG00000015575	GPATCH1	81	53.105	ENSACLG00000024740	gpatch1	81	53.333	Astatotilapia_calliptera
ENSAMEG00000015575	GPATCH1	90	51.868	ENSAMXG00000020177	gpatch1	97	52.527	Astyanax_mexicanus
ENSAMEG00000015575	GPATCH1	91	91.166	ENSBTAG00000000721	GPATCH1	100	86.803	Bos_taurus
ENSAMEG00000015575	GPATCH1	70	31.004	WBGene00011109	R07E5.1	76	31.199	Caenorhabditis_elegans
ENSAMEG00000015575	GPATCH1	100	88.210	ENSCJAG00000000684	GPATCH1	100	88.210	Callithrix_jacchus
ENSAMEG00000015575	GPATCH1	100	95.391	ENSCAFG00000007457	GPATCH1	84	95.391	Canis_familiaris
ENSAMEG00000015575	GPATCH1	94	95.195	ENSCAFG00020019731	GPATCH1	91	95.182	Canis_lupus_dingo
ENSAMEG00000015575	GPATCH1	99	91.116	ENSCHIG00000019626	GPATCH1	100	87.339	Capra_hircus
ENSAMEG00000015575	GPATCH1	97	79.428	ENSCAPG00000008827	GPATCH1	100	80.220	Cavia_aperea
ENSAMEG00000015575	GPATCH1	100	82.567	ENSCPOG00000024477	GPATCH1	100	83.209	Cavia_porcellus
ENSAMEG00000015575	GPATCH1	100	88.210	ENSCCAG00000024676	GPATCH1	100	88.532	Cebus_capucinus
ENSAMEG00000015575	GPATCH1	100	89.711	ENSCATG00000043637	GPATCH1	100	89.711	Cercocebus_atys
ENSAMEG00000015575	GPATCH1	96	82.979	ENSCLAG00000003395	-	100	83.091	Chinchilla_lanigera
ENSAMEG00000015575	GPATCH1	100	87.366	ENSCSAG00000004743	GPATCH1	100	87.366	Chlorocebus_sabaeus
ENSAMEG00000015575	GPATCH1	92	77.662	ENSCHOG00000012865	GPATCH1	100	77.662	Choloepus_hoffmanni
ENSAMEG00000015575	GPATCH1	78	70.588	ENSCPBG00000000666	GPATCH1	92	70.588	Chrysemys_picta_bellii
ENSAMEG00000015575	GPATCH1	93	32.584	ENSCING00000012518	-	99	33.333	Ciona_intestinalis
ENSAMEG00000015575	GPATCH1	94	87.438	ENSCANG00000012540	GPATCH1	100	87.438	Colobus_angolensis_palliatus
ENSAMEG00000015575	GPATCH1	97	82.178	ENSCGRG00001016736	Gpatch1	100	82.178	Cricetulus_griseus_chok1gshd
ENSAMEG00000015575	GPATCH1	89	67.689	ENSCGRG00000005069	Gpatch1	91	67.689	Cricetulus_griseus_crigri
ENSAMEG00000015575	GPATCH1	81	48.755	ENSCSEG00000019456	-	84	62.385	Cynoglossus_semilaevis
ENSAMEG00000015575	GPATCH1	90	51.432	ENSDARG00000033418	gpatch1	92	51.652	Danio_rerio
ENSAMEG00000015575	GPATCH1	91	87.074	ENSDNOG00000005291	GPATCH1	95	87.074	Dasypus_novemcinctus
ENSAMEG00000015575	GPATCH1	94	79.954	ENSDORG00000012546	Gpatch1	95	80.376	Dipodomys_ordii
ENSAMEG00000015575	GPATCH1	96	30.878	FBgn0036386	CG8833	67	34.055	Drosophila_melanogaster
ENSAMEG00000015575	GPATCH1	99	77.031	ENSETEG00000003626	GPATCH1	92	77.321	Echinops_telfairi
ENSAMEG00000015575	GPATCH1	94	37.555	ENSEBUG00000011286	gpatch1	91	38.408	Eptatretus_burgeri
ENSAMEG00000015575	GPATCH1	91	90.414	ENSEASG00005021162	GPATCH1	93	91.180	Equus_asinus_asinus
ENSAMEG00000015575	GPATCH1	94	91.180	ENSECAG00000022743	GPATCH1	88	90.941	Equus_caballus
ENSAMEG00000015575	GPATCH1	78	78.922	ENSEEUG00000012925	GPATCH1	78	78.922	Erinaceus_europaeus
ENSAMEG00000015575	GPATCH1	99	49.022	ENSELUG00000018195	gpatch1	90	51.311	Esox_lucius
ENSAMEG00000015575	GPATCH1	100	92.704	ENSFCAG00000014917	GPATCH1	100	92.704	Felis_catus
ENSAMEG00000015575	GPATCH1	99	62.920	ENSFALG00000007821	GPATCH1	89	63.201	Ficedula_albicollis
ENSAMEG00000015575	GPATCH1	96	82.962	ENSFDAG00000003871	GPATCH1	100	83.073	Fukomys_damarensis
ENSAMEG00000015575	GPATCH1	75	51.095	ENSGMOG00000003830	gpatch1	95	51.044	Gadus_morhua
ENSAMEG00000015575	GPATCH1	93	63.503	ENSGALG00000004839	GPATCH1	93	63.369	Gallus_gallus
ENSAMEG00000015575	GPATCH1	81	50.973	ENSGACG00000017544	gpatch1	94	48.789	Gasterosteus_aculeatus
ENSAMEG00000015575	GPATCH1	100	64.811	ENSGAGG00000010067	GPATCH1	100	65.645	Gopherus_agassizii
ENSAMEG00000015575	GPATCH1	98	88.659	ENSGGOG00000010862	GPATCH1	100	89.317	Gorilla_gorilla
ENSAMEG00000015575	GPATCH1	81	53.053	ENSHBUG00000023462	gpatch1	91	50.903	Haplochromis_burtoni
ENSAMEG00000015575	GPATCH1	100	84.582	ENSHGLG00000009334	GPATCH1	100	85.011	Heterocephalus_glaber_female
ENSAMEG00000015575	GPATCH1	100	84.690	ENSHGLG00100018074	GPATCH1	100	85.118	Heterocephalus_glaber_male
ENSAMEG00000015575	GPATCH1	93	51.656	ENSIPUG00000014977	gpatch1	90	52.841	Ictalurus_punctatus
ENSAMEG00000015575	GPATCH1	100	88.103	ENSSTOG00000003720	GPATCH1	100	88.103	Ictidomys_tridecemlineatus
ENSAMEG00000015575	GPATCH1	91	83.746	ENSJJAG00000023765	Gpatch1	100	79.914	Jaculus_jaculus
ENSAMEG00000015575	GPATCH1	89	51.800	ENSKMAG00000017950	gpatch1	89	52.028	Kryptolebias_marmoratus
ENSAMEG00000015575	GPATCH1	81	52.315	ENSLBEG00000026527	gpatch1	88	51.181	Labrus_bergylta
ENSAMEG00000015575	GPATCH1	88	58.683	ENSLACG00000008130	GPATCH1	90	58.802	Latimeria_chalumnae
ENSAMEG00000015575	GPATCH1	81	56.939	ENSLOCG00000001800	gpatch1	90	54.420	Lepisosteus_oculatus
ENSAMEG00000015575	GPATCH1	99	89.010	ENSLAFG00000013589	GPATCH1	100	89.056	Loxodonta_africana
ENSAMEG00000015575	GPATCH1	91	89.020	ENSMFAG00000034418	GPATCH1	96	89.020	Macaca_fascicularis
ENSAMEG00000015575	GPATCH1	100	89.293	ENSMMUG00000011790	GPATCH1	100	89.293	Macaca_mulatta
ENSAMEG00000015575	GPATCH1	100	89.175	ENSMNEG00000045084	GPATCH1	100	89.175	Macaca_nemestrina
ENSAMEG00000015575	GPATCH1	100	78.778	ENSMLEG00000043840	GPATCH1	100	78.778	Mandrillus_leucophaeus
ENSAMEG00000015575	GPATCH1	81	52.978	ENSMZEG00005001926	gpatch1	82	53.210	Maylandia_zebra
ENSAMEG00000015575	GPATCH1	90	63.457	ENSMGAG00000005775	GPATCH1	90	62.428	Meleagris_gallopavo
ENSAMEG00000015575	GPATCH1	90	78.538	ENSMICG00000004829	GPATCH1	93	79.245	Microcebus_murinus
ENSAMEG00000015575	GPATCH1	99	82.131	ENSMOCG00000000174	Gpatch1	92	82.924	Microtus_ochrogaster
ENSAMEG00000015575	GPATCH1	81	50.633	ENSMMOG00000002140	gpatch1	87	51.266	Mola_mola
ENSAMEG00000015575	GPATCH1	91	74.765	ENSMODG00000012226	GPATCH1	90	74.765	Monodelphis_domestica
ENSAMEG00000015575	GPATCH1	99	47.876	ENSMALG00000014386	gpatch1	91	50.341	Monopterus_albus
ENSAMEG00000015575	GPATCH1	100	84.657	ENSMUSG00000063808	Gpatch1	100	95.918	Mus_musculus
ENSAMEG00000015575	GPATCH1	100	84.368	MGP_PahariEiJ_G0012816	Gpatch1	100	96.939	Mus_pahari
ENSAMEG00000015575	GPATCH1	100	83.816	MGP_SPRETEiJ_G0030681	Gpatch1	100	96.939	Mus_spretus
ENSAMEG00000015575	GPATCH1	100	95.064	ENSMPUG00000007658	GPATCH1	100	95.064	Mustela_putorius_furo
ENSAMEG00000015575	GPATCH1	100	88.841	ENSMLUG00000012161	GPATCH1	100	90.665	Myotis_lucifugus
ENSAMEG00000015575	GPATCH1	100	84.442	ENSNGAG00000012455	Gpatch1	100	84.442	Nannospalax_galili
ENSAMEG00000015575	GPATCH1	100	89.068	ENSNLEG00000007659	GPATCH1	100	89.068	Nomascus_leucogenys
ENSAMEG00000015575	GPATCH1	79	67.711	ENSMEUG00000015174	GPATCH1	79	67.711	Notamacropus_eugenii
ENSAMEG00000015575	GPATCH1	99	81.799	ENSODEG00000007103	GPATCH1	99	82.101	Octodon_degus
ENSAMEG00000015575	GPATCH1	81	54.651	ENSONIG00000003302	gpatch1	91	52.934	Oreochromis_niloticus
ENSAMEG00000015575	GPATCH1	99	71.658	ENSOANG00000012732	GPATCH1	99	72.395	Ornithorhynchus_anatinus
ENSAMEG00000015575	GPATCH1	100	87.983	ENSOCUG00000015905	GPATCH1	100	87.983	Oryctolagus_cuniculus
ENSAMEG00000015575	GPATCH1	89	50.645	ENSORLG00000018706	gpatch1	88	50.693	Oryzias_latipes
ENSAMEG00000015575	GPATCH1	89	49.190	ENSOMEG00000022688	gpatch1	90	50.694	Oryzias_melastigma
ENSAMEG00000015575	GPATCH1	85	88.496	ENSOGAG00000004016	GPATCH1	100	88.496	Otolemur_garnettii
ENSAMEG00000015575	GPATCH1	98	90.570	ENSOARG00000004365	GPATCH1	99	86.703	Ovis_aries
ENSAMEG00000015575	GPATCH1	100	88.853	ENSPPAG00000020990	GPATCH1	100	88.853	Pan_paniscus
ENSAMEG00000015575	GPATCH1	100	92.811	ENSPPRG00000017245	GPATCH1	100	92.811	Panthera_pardus
ENSAMEG00000015575	GPATCH1	100	93.777	ENSPTIG00000019649	GPATCH1	100	93.777	Panthera_tigris_altaica
ENSAMEG00000015575	GPATCH1	100	88.960	ENSPTRG00000010803	GPATCH1	100	88.960	Pan_troglodytes
ENSAMEG00000015575	GPATCH1	91	89.424	ENSPANG00000012374	GPATCH1	96	89.424	Papio_anubis
ENSAMEG00000015575	GPATCH1	81	56.538	ENSPKIG00000020745	gpatch1	79	57.428	Paramormyrops_kingsleyae
ENSAMEG00000015575	GPATCH1	100	62.420	ENSPSIG00000013433	GPATCH1	100	62.566	Pelodiscus_sinensis
ENSAMEG00000015575	GPATCH1	100	82.725	ENSPEMG00000000636	Gpatch1	100	80.579	Peromyscus_maniculatus_bairdii
ENSAMEG00000015575	GPATCH1	91	75.352	ENSPCIG00000021003	GPATCH1	95	75.472	Phascolarctos_cinereus
ENSAMEG00000015575	GPATCH1	73	49.140	ENSPREG00000008264	gpatch1	97	45.402	Poecilia_reticulata
ENSAMEG00000015575	GPATCH1	100	86.602	ENSPPYG00000009824	GPATCH1	100	86.602	Pongo_abelii
ENSAMEG00000015575	GPATCH1	83	80.806	ENSPCAG00000005931	GPATCH1	93	81.873	Procavia_capensis
ENSAMEG00000015575	GPATCH1	93	82.048	ENSPCOG00000009674	GPATCH1	97	83.353	Propithecus_coquereli
ENSAMEG00000015575	GPATCH1	83	88.525	ENSPVAG00000017767	GPATCH1	92	89.764	Pteropus_vampyrus
ENSAMEG00000015575	GPATCH1	81	53.512	ENSPNYG00000018189	gpatch1	91	53.731	Pundamilia_nyererei
ENSAMEG00000015575	GPATCH1	91	52.203	ENSPNAG00000013187	gpatch1	92	52.608	Pygocentrus_nattereri
ENSAMEG00000015575	GPATCH1	100	83.906	ENSRNOG00000011584	Gpatch1	100	84.013	Rattus_norvegicus
ENSAMEG00000015575	GPATCH1	100	82.013	ENSRBIG00000034723	GPATCH1	91	82.800	Rhinopithecus_bieti
ENSAMEG00000015575	GPATCH1	100	89.711	ENSRROG00000024428	GPATCH1	100	89.711	Rhinopithecus_roxellana
ENSAMEG00000015575	GPATCH1	100	88.639	ENSSBOG00000034650	GPATCH1	100	88.639	Saimiri_boliviensis_boliviensis
ENSAMEG00000015575	GPATCH1	99	74.362	ENSSHAG00000016016	GPATCH1	99	74.464	Sarcophilus_harrisii
ENSAMEG00000015575	GPATCH1	81	55.089	ENSSFOG00015011535	gpatch1	89	53.218	Scleropages_formosus
ENSAMEG00000015575	GPATCH1	99	44.683	ENSSMAG00000002883	gpatch1	93	47.363	Scophthalmus_maximus
ENSAMEG00000015575	GPATCH1	81	52.060	ENSSDUG00000007444	gpatch1	90	49.723	Seriola_dumerili
ENSAMEG00000015575	GPATCH1	81	51.894	ENSSLDG00000002856	gpatch1	91	53.285	Seriola_lalandi_dorsalis
ENSAMEG00000015575	GPATCH1	72	85.757	ENSSARG00000004108	GPATCH1	72	85.757	Sorex_araneus
ENSAMEG00000015575	GPATCH1	91	91.048	ENSSSCG00000002865	GPATCH1	94	91.048	Sus_scrofa
ENSAMEG00000015575	GPATCH1	99	64.401	ENSTGUG00000009401	GPATCH1	91	63.938	Taeniopygia_guttata
ENSAMEG00000015575	GPATCH1	81	51.804	ENSTRUG00000005785	-	90	50.000	Takifugu_rubripes
ENSAMEG00000015575	GPATCH1	81	51.804	ENSTRUG00000025081	gpatch1	90	50.000	Takifugu_rubripes
ENSAMEG00000015575	GPATCH1	81	52.320	ENSTNIG00000002554	gpatch1	99	52.941	Tetraodon_nigroviridis
ENSAMEG00000015575	GPATCH1	64	77.966	ENSTBEG00000007750	-	84	77.966	Tupaia_belangeri
ENSAMEG00000015575	GPATCH1	99	83.297	ENSTTRG00000012221	GPATCH1	100	83.422	Tursiops_truncatus
ENSAMEG00000015575	GPATCH1	99	94.391	ENSUMAG00000014645	GPATCH1	100	98.449	Ursus_maritimus
ENSAMEG00000015575	GPATCH1	79	97.714	ENSVPAG00000010313	GPATCH1	86	97.283	Vicugna_pacos
ENSAMEG00000015575	GPATCH1	94	94.851	ENSVVUG00000016572	GPATCH1	91	94.830	Vulpes_vulpes
ENSAMEG00000015575	GPATCH1	99	50.953	ENSXETG00000018276	gpatch1	100	50.795	Xenopus_tropicalis