EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000015657 (Gene tree)
Gene ID: 100470504
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 43603 bases
Position: chrGL192505.1:1653880-1697482
Accession: 29434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000016554	zf-CCCH	PF00642.24	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000017235	RC3H1-201	3399	-	ENSAMEP00000016554	1132 (aa)	-	G1MB27

Gene Model

Click here to download ENSAMEG00000015657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000015657's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000015657	RC3H1	92	54.281	ENSAMEG00000006498	RC3H2	87	53.916

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000015657	RC3H1	100	96.911	ENSG00000135870	RC3H1	100	96.911	Homo_sapiens
ENSAMEG00000015657	RC3H1	100	88.307	ENSAPLG00000005341	RC3H1	100	87.773	Anas_platyrhynchos
ENSAMEG00000015657	RC3H1	100	85.240	ENSACAG00000015271	RC3H1	100	85.127	Anolis_carolinensis
ENSAMEG00000015657	RC3H1	100	97.176	ENSANAG00000036716	RC3H1	100	97.176	Aotus_nancymaae
ENSAMEG00000015657	RC3H1	100	95.499	ENSBTAG00000052708	RC3H1	100	95.499	Bos_taurus
ENSAMEG00000015657	RC3H1	100	96.911	ENSCJAG00000009106	RC3H1	100	96.911	Callithrix_jacchus
ENSAMEG00000015657	RC3H1	100	98.675	ENSCAFG00000014434	RC3H1	100	98.675	Canis_familiaris
ENSAMEG00000015657	RC3H1	100	98.588	ENSCAFG00020017112	RC3H1	100	98.588	Canis_lupus_dingo
ENSAMEG00000015657	RC3H1	100	95.936	ENSCHIG00000002873	RC3H1	100	95.936	Capra_hircus
ENSAMEG00000015657	RC3H1	99	95.230	ENSTSYG00000003913	RC3H1	99	95.230	Carlito_syrichta
ENSAMEG00000015657	RC3H1	100	91.086	ENSCPOG00000004349	RC3H1	100	91.086	Cavia_porcellus
ENSAMEG00000015657	RC3H1	100	94.616	ENSCCAG00000025652	RC3H1	98	96.746	Cebus_capucinus
ENSAMEG00000015657	RC3H1	100	97.087	ENSCATG00000033497	RC3H1	100	97.087	Cercocebus_atys
ENSAMEG00000015657	RC3H1	100	94.616	ENSCLAG00000011267	RC3H1	100	94.616	Chinchilla_lanigera
ENSAMEG00000015657	RC3H1	96	97.053	ENSCSAG00000011823	RC3H1	85	97.053	Chlorocebus_sabaeus
ENSAMEG00000015657	RC3H1	100	89.483	ENSCPBG00000014670	RC3H1	100	96.304	Chrysemys_picta_bellii
ENSAMEG00000015657	RC3H1	100	97.090	ENSCANG00000032120	RC3H1	100	97.090	Colobus_angolensis_palliatus
ENSAMEG00000015657	RC3H1	100	94.346	ENSCGRG00001020812	Rc3h1	100	94.346	Cricetulus_griseus_chok1gshd
ENSAMEG00000015657	RC3H1	100	94.346	ENSCGRG00000011952	Rc3h1	100	94.346	Cricetulus_griseus_crigri
ENSAMEG00000015657	RC3H1	55	94.373	ENSDNOG00000011494	RC3H1	99	94.373	Dasypus_novemcinctus
ENSAMEG00000015657	RC3H1	100	95.406	ENSDORG00000004855	Rc3h1	100	95.406	Dipodomys_ordii
ENSAMEG00000015657	RC3H1	82	95.928	ENSETEG00000012064	RC3H1	87	95.928	Echinops_telfairi
ENSAMEG00000015657	RC3H1	100	95.671	ENSEASG00005017000	RC3H1	100	95.671	Equus_asinus_asinus
ENSAMEG00000015657	RC3H1	100	95.495	ENSECAG00000021208	RC3H1	100	95.495	Equus_caballus
ENSAMEG00000015657	RC3H1	83	96.639	ENSEEUG00000014861	RC3H1	93	83.117	Erinaceus_europaeus
ENSAMEG00000015657	RC3H1	100	97.705	ENSFCAG00000014924	RC3H1	100	97.705	Felis_catus
ENSAMEG00000015657	RC3H1	100	87.325	ENSFALG00000002947	RC3H1	100	86.702	Ficedula_albicollis
ENSAMEG00000015657	RC3H1	100	94.704	ENSFDAG00000013303	RC3H1	100	94.704	Fukomys_damarensis
ENSAMEG00000015657	RC3H1	100	87.456	ENSGALG00000004587	RC3H1	100	86.918	Gallus_gallus
ENSAMEG00000015657	RC3H1	100	87.709	ENSGAGG00000018194	RC3H1	100	87.621	Gopherus_agassizii
ENSAMEG00000015657	RC3H1	100	90.237	ENSGGOG00000005735	RC3H1	100	90.237	Gorilla_gorilla
ENSAMEG00000015657	RC3H1	88	89.039	ENSHGLG00000004183	-	100	89.039	Heterocephalus_glaber_female
ENSAMEG00000015657	RC3H1	100	93.998	ENSHGLG00100008577	RC3H1	100	93.998	Heterocephalus_glaber_male
ENSAMEG00000015657	RC3H1	100	96.028	ENSSTOG00000016033	RC3H1	100	96.028	Ictidomys_tridecemlineatus
ENSAMEG00000015657	RC3H1	100	94.788	ENSJJAG00000018915	Rc3h1	100	94.965	Jaculus_jaculus
ENSAMEG00000015657	RC3H1	100	75.436	ENSLACG00000016186	RC3H1	100	78.279	Latimeria_chalumnae
ENSAMEG00000015657	RC3H1	97	96.809	ENSLAFG00000004367	RC3H1	100	96.809	Loxodonta_africana
ENSAMEG00000015657	RC3H1	100	96.999	ENSMFAG00000033725	RC3H1	100	96.999	Macaca_fascicularis
ENSAMEG00000015657	RC3H1	100	96.911	ENSMMUG00000000630	RC3H1	100	96.911	Macaca_mulatta
ENSAMEG00000015657	RC3H1	100	97.087	ENSMNEG00000035968	RC3H1	100	97.087	Macaca_nemestrina
ENSAMEG00000015657	RC3H1	100	96.999	ENSMLEG00000037455	RC3H1	100	96.999	Mandrillus_leucophaeus
ENSAMEG00000015657	RC3H1	97	94.254	ENSMAUG00000020864	Rc3h1	100	94.254	Mesocricetus_auratus
ENSAMEG00000015657	RC3H1	100	96.643	ENSMICG00000003000	RC3H1	100	96.643	Microcebus_murinus
ENSAMEG00000015657	RC3H1	93	93.081	ENSMOCG00000016587	Rc3h1	98	93.081	Microtus_ochrogaster
ENSAMEG00000015657	RC3H1	100	91.975	ENSMODG00000004289	RC3H1	100	92.063	Monodelphis_domestica
ENSAMEG00000015657	RC3H1	100	93.640	MGP_CAROLIEiJ_G0014756	Rc3h1	100	93.640	Mus_caroli
ENSAMEG00000015657	RC3H1	100	93.551	ENSMUSG00000040423	Rc3h1	100	93.551	Mus_musculus
ENSAMEG00000015657	RC3H1	100	93.375	MGP_PahariEiJ_G0027992	Rc3h1	100	93.375	Mus_pahari
ENSAMEG00000015657	RC3H1	100	93.375	MGP_SPRETEiJ_G0015563	Rc3h1	100	93.375	Mus_spretus
ENSAMEG00000015657	RC3H1	100	98.147	ENSMPUG00000004747	RC3H1	100	98.147	Mustela_putorius_furo
ENSAMEG00000015657	RC3H1	100	95.760	ENSMLUG00000011127	RC3H1	100	95.760	Myotis_lucifugus
ENSAMEG00000015657	RC3H1	100	95.583	ENSNGAG00000011135	Rc3h1	100	95.583	Nannospalax_galili
ENSAMEG00000015657	RC3H1	100	96.911	ENSNLEG00000015327	RC3H1	100	96.911	Nomascus_leucogenys
ENSAMEG00000015657	RC3H1	99	82.655	ENSOPRG00000013068	RC3H1	99	82.655	Ochotona_princeps
ENSAMEG00000015657	RC3H1	100	94.086	ENSODEG00000014185	RC3H1	100	94.086	Octodon_degus
ENSAMEG00000015657	RC3H1	100	91.266	ENSOANG00000000924	RC3H1	100	91.354	Ornithorhynchus_anatinus
ENSAMEG00000015657	RC3H1	99	95.968	ENSOCUG00000004930	RC3H1	98	95.968	Oryctolagus_cuniculus
ENSAMEG00000015657	RC3H1	100	89.418	ENSOGAG00000004044	RC3H1	100	89.418	Otolemur_garnettii
ENSAMEG00000015657	RC3H1	100	96.404	ENSOARG00000013011	RC3H1	100	96.404	Ovis_aries
ENSAMEG00000015657	RC3H1	100	96.914	ENSPPAG00000039253	RC3H1	100	96.914	Pan_paniscus
ENSAMEG00000015657	RC3H1	100	97.173	ENSPPRG00000009007	RC3H1	100	97.173	Panthera_pardus
ENSAMEG00000015657	RC3H1	100	97.537	ENSPTIG00000015326	RC3H1	100	97.537	Panthera_tigris_altaica
ENSAMEG00000015657	RC3H1	100	96.914	ENSPTRG00000001702	RC3H1	100	96.914	Pan_troglodytes
ENSAMEG00000015657	RC3H1	100	96.999	ENSPANG00000008886	RC3H1	100	96.999	Papio_anubis
ENSAMEG00000015657	RC3H1	100	88.860	ENSPSIG00000016181	RC3H1	100	89.035	Pelodiscus_sinensis
ENSAMEG00000015657	RC3H1	100	93.905	ENSPEMG00000011966	Rc3h1	100	93.816	Peromyscus_maniculatus_bairdii
ENSAMEG00000015657	RC3H1	70	94.051	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSAMEG00000015657	RC3H1	100	93.557	ENSPPYG00000000490	RC3H1	98	96.077	Pongo_abelii
ENSAMEG00000015657	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSAMEG00000015657	RC3H1	83	96.150	ENSPCOG00000021795	RC3H1	96	96.150	Propithecus_coquereli
ENSAMEG00000015657	RC3H1	100	87.898	ENSPVAG00000007593	RC3H1	100	87.898	Pteropus_vampyrus
ENSAMEG00000015657	RC3H1	97	61.532	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSAMEG00000015657	RC3H1	100	97.002	ENSRBIG00000037743	RC3H1	100	97.002	Rhinopithecus_bieti
ENSAMEG00000015657	RC3H1	100	97.087	ENSRROG00000036546	RC3H1	100	97.087	Rhinopithecus_roxellana
ENSAMEG00000015657	RC3H1	93	88.341	ENSSBOG00000010664	RC3H1	100	90.720	Saimiri_boliviensis_boliviensis
ENSAMEG00000015657	RC3H1	100	91.278	ENSSHAG00000007589	RC3H1	100	91.366	Sarcophilus_harrisii
ENSAMEG00000015657	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSAMEG00000015657	RC3H1	100	84.137	ENSSPUG00000018472	RC3H1	100	84.298	Sphenodon_punctatus
ENSAMEG00000015657	RC3H1	100	96.820	ENSSSCG00000015498	RC3H1	100	96.820	Sus_scrofa
ENSAMEG00000015657	RC3H1	100	87.709	ENSTGUG00000004090	RC3H1	100	86.995	Taeniopygia_guttata
ENSAMEG00000015657	RC3H1	93	90.909	ENSTBEG00000005015	RC3H1	93	90.909	Tupaia_belangeri
ENSAMEG00000015657	RC3H1	100	96.035	ENSTTRG00000008572	RC3H1	100	96.035	Tursiops_truncatus
ENSAMEG00000015657	RC3H1	100	98.675	ENSUAMG00000019525	RC3H1	100	98.675	Ursus_americanus
ENSAMEG00000015657	RC3H1	100	99.206	ENSUMAG00000020087	RC3H1	100	99.206	Ursus_maritimus
ENSAMEG00000015657	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSAMEG00000015657	RC3H1	100	98.327	ENSVVUG00000014201	RC3H1	100	98.327	Vulpes_vulpes
ENSAMEG00000015657	RC3H1	100	78.454	ENSXETG00000020030	rc3h1	100	78.280	Xenopus_tropicalis