EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000016152 (Gene tree)
Gene ID: 100467421
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 20027 bases
Position: chrGL192835.1:1123128-1143154
Accession: 100467421
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000017064	RtcB	PF01139.17	4.3e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000017764	RTCB-201	1515	-	ENSAMEP00000017064	505 (aa)	XP_002921575	D2HHB0

Gene Model

Click here to download ENSAMEG00000016152's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000016152's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000016152	RTCB	100	99.802	ENSG00000100220	RTCB	100	99.802	Homo_sapiens
ENSAMEG00000016152	RTCB	100	94.653	ENSAPOG00000006040	rtcb	100	94.653	Acanthochromis_polyacanthus
ENSAMEG00000016152	RTCB	100	90.297	ENSACIG00000009083	rtcb	100	90.297	Amphilophus_citrinellus
ENSAMEG00000016152	RTCB	100	94.851	ENSAOCG00000005662	rtcb	100	95.435	Amphiprion_ocellaris
ENSAMEG00000016152	RTCB	100	94.851	ENSAPEG00000024701	rtcb	100	94.851	Amphiprion_percula
ENSAMEG00000016152	RTCB	96	89.733	ENSAPEG00000024653	rtcb	100	89.733	Amphiprion_percula
ENSAMEG00000016152	RTCB	100	94.455	ENSATEG00000000618	rtcb	100	94.455	Anabas_testudineus
ENSAMEG00000016152	RTCB	100	93.642	ENSACAG00000014817	RTCB	100	93.642	Anolis_carolinensis
ENSAMEG00000016152	RTCB	72	97.222	ENSANAG00000023724	-	100	62.846	Aotus_nancymaae
ENSAMEG00000016152	RTCB	100	83.762	ENSANAG00000018191	-	91	83.762	Aotus_nancymaae
ENSAMEG00000016152	RTCB	100	93.267	ENSACLG00000008367	rtcb	100	94.130	Astatotilapia_calliptera
ENSAMEG00000016152	RTCB	100	94.653	ENSAMXG00000042320	rtcb	100	94.653	Astyanax_mexicanus
ENSAMEG00000016152	RTCB	100	99.406	ENSBTAG00000011070	RTCB	100	99.406	Bos_taurus
ENSAMEG00000016152	RTCB	100	73.069	WBGene00008877	rtcb-1	100	73.069	Caenorhabditis_elegans
ENSAMEG00000016152	RTCB	100	99.406	ENSCJAG00000006128	RTCB	100	99.406	Callithrix_jacchus
ENSAMEG00000016152	RTCB	100	95.644	ENSCAFG00000010789	-	100	95.644	Canis_familiaris
ENSAMEG00000016152	RTCB	100	100.000	ENSCAFG00000001785	RTCB	100	100.000	Canis_familiaris
ENSAMEG00000016152	RTCB	100	100.000	ENSCAFG00020004890	-	100	100.000	Canis_lupus_dingo
ENSAMEG00000016152	RTCB	87	96.364	ENSCAFG00020018953	-	99	96.364	Canis_lupus_dingo
ENSAMEG00000016152	RTCB	100	99.604	ENSCHIG00000027009	-	100	99.604	Capra_hircus
ENSAMEG00000016152	RTCB	100	99.010	ENSTSYG00000012320	RTCB	100	99.010	Carlito_syrichta
ENSAMEG00000016152	RTCB	94	98.952	ENSCAPG00000011647	RTCB	96	98.952	Cavia_aperea
ENSAMEG00000016152	RTCB	100	99.406	ENSCCAG00000000618	RTCB	100	99.406	Cebus_capucinus
ENSAMEG00000016152	RTCB	100	99.406	ENSCATG00000033424	RTCB	100	99.406	Cercocebus_atys
ENSAMEG00000016152	RTCB	100	99.208	ENSCLAG00000007997	RTCB	100	99.208	Chinchilla_lanigera
ENSAMEG00000016152	RTCB	100	99.208	ENSCSAG00000008351	RTCB	100	99.208	Chlorocebus_sabaeus
ENSAMEG00000016152	RTCB	100	85.149	ENSCHOG00000009123	RTCB	100	85.149	Choloepus_hoffmanni
ENSAMEG00000016152	RTCB	100	96.436	ENSCPBG00000023184	RTCB	100	96.436	Chrysemys_picta_bellii
ENSAMEG00000016152	RTCB	100	81.782	ENSCING00000003830	-	100	81.782	Ciona_intestinalis
ENSAMEG00000016152	RTCB	100	82.178	ENSCSAVG00000008124	-	99	82.178	Ciona_savignyi
ENSAMEG00000016152	RTCB	100	95.644	ENSCANG00000001891	RTCB	100	95.644	Colobus_angolensis_palliatus
ENSAMEG00000016152	RTCB	100	99.208	ENSCGRG00001011173	Rtcb	100	99.208	Cricetulus_griseus_chok1gshd
ENSAMEG00000016152	RTCB	93	99.363	ENSCGRG00000009587	-	96	99.363	Cricetulus_griseus_crigri
ENSAMEG00000016152	RTCB	100	93.861	ENSCSEG00000003986	rtcb	100	93.861	Cynoglossus_semilaevis
ENSAMEG00000016152	RTCB	82	93.269	ENSCVAG00000000569	rtcb	95	93.269	Cyprinodon_variegatus
ENSAMEG00000016152	RTCB	100	94.059	ENSDARG00000101047	rtcb	100	94.059	Danio_rerio
ENSAMEG00000016152	RTCB	80	96.560	ENSDNOG00000012425	RTCB	99	96.560	Dasypus_novemcinctus
ENSAMEG00000016152	RTCB	100	98.812	ENSDORG00000010855	Rtcb	100	98.812	Dipodomys_ordii
ENSAMEG00000016152	RTCB	99	85.288	FBgn0032781	RtcB	99	85.288	Drosophila_melanogaster
ENSAMEG00000016152	RTCB	100	92.475	ENSETEG00000001988	RTCB	100	92.475	Echinops_telfairi
ENSAMEG00000016152	RTCB	100	85.743	ENSEBUG00000014235	rtcb	100	85.743	Eptatretus_burgeri
ENSAMEG00000016152	RTCB	100	99.604	ENSEASG00005019059	RTCB	100	99.604	Equus_asinus_asinus
ENSAMEG00000016152	RTCB	100	99.604	ENSECAG00000023998	RTCB	100	99.604	Equus_caballus
ENSAMEG00000016152	RTCB	89	89.933	ENSEEUG00000006251	RTCB	100	89.933	Erinaceus_europaeus
ENSAMEG00000016152	RTCB	100	82.798	ENSELUG00000009275	rtcb	100	82.798	Esox_lucius
ENSAMEG00000016152	RTCB	100	99.802	ENSFCAG00000026480	RTCB	100	99.802	Felis_catus
ENSAMEG00000016152	RTCB	100	97.426	ENSFALG00000013334	RTCB	100	97.426	Ficedula_albicollis
ENSAMEG00000016152	RTCB	100	99.604	ENSFDAG00000018150	RTCB	100	99.604	Fukomys_damarensis
ENSAMEG00000016152	RTCB	100	94.455	ENSFHEG00000009595	rtcb	100	94.455	Fundulus_heteroclitus
ENSAMEG00000016152	RTCB	100	91.881	ENSGMOG00000018882	rtcb	100	91.881	Gadus_morhua
ENSAMEG00000016152	RTCB	100	97.228	ENSGALG00000012611	RTCB	100	97.228	Gallus_gallus
ENSAMEG00000016152	RTCB	100	94.851	ENSGAFG00000004198	rtcb	100	94.851	Gambusia_affinis
ENSAMEG00000016152	RTCB	100	93.861	ENSGACG00000000586	rtcb	100	93.861	Gasterosteus_aculeatus
ENSAMEG00000016152	RTCB	93	95.745	ENSGAGG00000019133	RTCB	98	95.745	Gopherus_agassizii
ENSAMEG00000016152	RTCB	100	99.802	ENSGGOG00000011402	RTCB	100	99.802	Gorilla_gorilla
ENSAMEG00000016152	RTCB	100	93.267	ENSHBUG00000020571	rtcb	100	93.267	Haplochromis_burtoni
ENSAMEG00000016152	RTCB	93	70.339	ENSHGLG00000001066	-	99	70.339	Heterocephalus_glaber_female
ENSAMEG00000016152	RTCB	100	99.604	ENSHGLG00000004492	RTCB	100	99.604	Heterocephalus_glaber_female
ENSAMEG00000016152	RTCB	100	99.604	ENSHGLG00100008965	RTCB	100	99.604	Heterocephalus_glaber_male
ENSAMEG00000016152	RTCB	100	91.519	ENSHCOG00000006450	rtcb	100	91.519	Hippocampus_comes
ENSAMEG00000016152	RTCB	100	94.455	ENSIPUG00000015443	rtcb	100	94.455	Ictalurus_punctatus
ENSAMEG00000016152	RTCB	100	99.406	ENSSTOG00000003878	RTCB	100	99.406	Ictidomys_tridecemlineatus
ENSAMEG00000016152	RTCB	100	98.812	ENSJJAG00000010667	Rtcb	100	98.812	Jaculus_jaculus
ENSAMEG00000016152	RTCB	100	94.455	ENSKMAG00000013178	rtcb	100	94.455	Kryptolebias_marmoratus
ENSAMEG00000016152	RTCB	100	93.663	ENSLBEG00000000214	rtcb	100	93.663	Labrus_bergylta
ENSAMEG00000016152	RTCB	100	94.653	ENSLBEG00000010566	RTCB	100	94.653	Labrus_bergylta
ENSAMEG00000016152	RTCB	100	95.248	ENSLACG00000013033	RTCB	100	95.248	Latimeria_chalumnae
ENSAMEG00000016152	RTCB	100	94.653	ENSLOCG00000016515	rtcb	99	94.653	Lepisosteus_oculatus
ENSAMEG00000016152	RTCB	100	98.614	ENSLAFG00000002082	RTCB	100	98.614	Loxodonta_africana
ENSAMEG00000016152	RTCB	100	99.208	ENSMFAG00000034419	RTCB	100	99.208	Macaca_fascicularis
ENSAMEG00000016152	RTCB	100	99.208	ENSMMUG00000006720	RTCB	100	99.208	Macaca_mulatta
ENSAMEG00000016152	RTCB	100	99.208	ENSMNEG00000040669	RTCB	100	99.208	Macaca_nemestrina
ENSAMEG00000016152	RTCB	100	99.406	ENSMLEG00000040505	RTCB	100	99.406	Mandrillus_leucophaeus
ENSAMEG00000016152	RTCB	100	94.455	ENSMAMG00000020676	rtcb	100	94.455	Mastacembelus_armatus
ENSAMEG00000016152	RTCB	100	93.267	ENSMZEG00005018942	rtcb	100	93.267	Maylandia_zebra
ENSAMEG00000016152	RTCB	100	96.844	ENSMGAG00000012805	RTCB	100	96.844	Meleagris_gallopavo
ENSAMEG00000016152	RTCB	60	100.000	ENSMAUG00000008301	Rtcb	100	100.000	Mesocricetus_auratus
ENSAMEG00000016152	RTCB	100	99.604	ENSMICG00000013303	-	100	99.604	Microcebus_murinus
ENSAMEG00000016152	RTCB	100	80.198	ENSMICG00000036677	-	100	80.198	Microcebus_murinus
ENSAMEG00000016152	RTCB	100	99.208	ENSMOCG00000002440	Rtcb	100	99.208	Microtus_ochrogaster
ENSAMEG00000016152	RTCB	100	94.455	ENSMMOG00000005987	rtcb	100	94.455	Mola_mola
ENSAMEG00000016152	RTCB	100	98.218	ENSMODG00000001414	RTCB	100	98.218	Monodelphis_domestica
ENSAMEG00000016152	RTCB	100	94.653	ENSMALG00000007603	rtcb	100	94.653	Monopterus_albus
ENSAMEG00000016152	RTCB	100	99.208	MGP_CAROLIEiJ_G0015689	Rtcb	100	99.208	Mus_caroli
ENSAMEG00000016152	RTCB	100	99.208	ENSMUSG00000001783	Rtcb	100	99.208	Mus_musculus
ENSAMEG00000016152	RTCB	100	99.208	MGP_PahariEiJ_G0031396	Rtcb	100	99.208	Mus_pahari
ENSAMEG00000016152	RTCB	100	99.208	MGP_SPRETEiJ_G0016507	Rtcb	100	99.208	Mus_spretus
ENSAMEG00000016152	RTCB	100	100.000	ENSMPUG00000012285	RTCB	100	100.000	Mustela_putorius_furo
ENSAMEG00000016152	RTCB	100	96.844	ENSMLUG00000007803	RTCB	100	96.844	Myotis_lucifugus
ENSAMEG00000016152	RTCB	75	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSAMEG00000016152	RTCB	100	93.465	ENSNBRG00000017202	rtcb	100	93.465	Neolamprologus_brichardi
ENSAMEG00000016152	RTCB	100	99.802	ENSNLEG00000004960	RTCB	100	99.802	Nomascus_leucogenys
ENSAMEG00000016152	RTCB	100	73.069	ENSMEUG00000007809	-	100	73.069	Notamacropus_eugenii
ENSAMEG00000016152	RTCB	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSAMEG00000016152	RTCB	100	65.743	ENSODEG00000005042	-	100	65.743	Octodon_degus
ENSAMEG00000016152	RTCB	82	100.000	ENSODEG00000013033	-	100	100.000	Octodon_degus
ENSAMEG00000016152	RTCB	100	94.455	ENSONIG00000007474	rtcb	100	94.455	Oreochromis_niloticus
ENSAMEG00000016152	RTCB	100	98.218	ENSOANG00000005524	RTCB	100	98.218	Ornithorhynchus_anatinus
ENSAMEG00000016152	RTCB	93	99.362	ENSOCUG00000008270	RTCB	96	99.362	Oryctolagus_cuniculus
ENSAMEG00000016152	RTCB	100	93.861	ENSORLG00000020093	rtcb	100	93.861	Oryzias_latipes
ENSAMEG00000016152	RTCB	100	93.861	ENSORLG00020003706	rtcb	100	93.861	Oryzias_latipes_hni
ENSAMEG00000016152	RTCB	100	94.059	ENSORLG00015002968	rtcb	100	94.059	Oryzias_latipes_hsok
ENSAMEG00000016152	RTCB	100	93.663	ENSOMEG00000021278	rtcb	100	93.663	Oryzias_melastigma
ENSAMEG00000016152	RTCB	100	99.010	ENSOGAG00000001425	RTCB	100	99.010	Otolemur_garnettii
ENSAMEG00000016152	RTCB	100	99.604	ENSOARG00000018008	RTCB	100	99.604	Ovis_aries
ENSAMEG00000016152	RTCB	100	99.802	ENSPPAG00000028667	RTCB	100	99.802	Pan_paniscus
ENSAMEG00000016152	RTCB	100	99.802	ENSPPRG00000004038	RTCB	100	99.802	Panthera_pardus
ENSAMEG00000016152	RTCB	94	96.211	ENSPTIG00000020499	RTCB	97	96.211	Panthera_tigris_altaica
ENSAMEG00000016152	RTCB	100	99.802	ENSPTRG00000014287	RTCB	100	99.802	Pan_troglodytes
ENSAMEG00000016152	RTCB	100	99.208	ENSPANG00000016035	RTCB	100	99.208	Papio_anubis
ENSAMEG00000016152	RTCB	100	93.069	ENSPKIG00000001881	rtcb	100	93.069	Paramormyrops_kingsleyae
ENSAMEG00000016152	RTCB	91	97.826	ENSPSIG00000011690	RTCB	100	97.826	Pelodiscus_sinensis
ENSAMEG00000016152	RTCB	100	94.851	ENSPMGG00000016672	rtcb	100	94.851	Periophthalmus_magnuspinnatus
ENSAMEG00000016152	RTCB	100	99.208	ENSPEMG00000019548	Rtcb	100	99.208	Peromyscus_maniculatus_bairdii
ENSAMEG00000016152	RTCB	100	91.683	ENSPMAG00000005657	rtcb	100	91.683	Petromyzon_marinus
ENSAMEG00000016152	RTCB	100	98.614	ENSPCIG00000009467	RTCB	100	98.614	Phascolarctos_cinereus
ENSAMEG00000016152	RTCB	100	95.248	ENSPFOG00000003058	rtcb	100	95.248	Poecilia_formosa
ENSAMEG00000016152	RTCB	100	95.050	ENSPLAG00000017663	rtcb	100	95.050	Poecilia_latipinna
ENSAMEG00000016152	RTCB	100	95.248	ENSPMEG00000006227	rtcb	100	95.248	Poecilia_mexicana
ENSAMEG00000016152	RTCB	100	94.851	ENSPREG00000018467	rtcb	100	94.851	Poecilia_reticulata
ENSAMEG00000016152	RTCB	100	99.802	ENSPPYG00000011752	RTCB	100	99.802	Pongo_abelii
ENSAMEG00000016152	RTCB	93	81.144	ENSPCAG00000013641	RTCB	100	81.144	Procavia_capensis
ENSAMEG00000016152	RTCB	100	99.406	ENSPCOG00000017243	RTCB	100	99.406	Propithecus_coquereli
ENSAMEG00000016152	RTCB	93	98.723	ENSPVAG00000002380	RTCB	100	98.723	Pteropus_vampyrus
ENSAMEG00000016152	RTCB	100	93.267	ENSPNYG00000022760	rtcb	100	93.267	Pundamilia_nyererei
ENSAMEG00000016152	RTCB	100	95.050	ENSPNAG00000009209	rtcb	100	95.050	Pygocentrus_nattereri
ENSAMEG00000016152	RTCB	100	99.208	ENSRNOG00000004813	Rtcb	100	99.208	Rattus_norvegicus
ENSAMEG00000016152	RTCB	100	90.711	ENSRBIG00000042090	RTCB	100	90.711	Rhinopithecus_bieti
ENSAMEG00000016152	RTCB	100	94.455	ENSSBOG00000020085	-	100	94.455	Saimiri_boliviensis_boliviensis
ENSAMEG00000016152	RTCB	94	99.367	ENSSHAG00000016277	RTCB	100	99.367	Sarcophilus_harrisii
ENSAMEG00000016152	RTCB	100	93.861	ENSSFOG00015011572	RTCB	100	93.861	Scleropages_formosus
ENSAMEG00000016152	RTCB	100	93.069	ENSSFOG00015000763	rtcb	100	93.069	Scleropages_formosus
ENSAMEG00000016152	RTCB	100	90.891	ENSSMAG00000005096	rtcb	100	90.891	Scophthalmus_maximus
ENSAMEG00000016152	RTCB	100	93.861	ENSSDUG00000012605	rtcb	100	93.861	Seriola_dumerili
ENSAMEG00000016152	RTCB	100	93.861	ENSSLDG00000019458	rtcb	100	93.861	Seriola_lalandi_dorsalis
ENSAMEG00000016152	RTCB	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSAMEG00000016152	RTCB	100	96.040	ENSSPUG00000012814	RTCB	100	96.040	Sphenodon_punctatus
ENSAMEG00000016152	RTCB	100	94.851	ENSSPAG00000004623	rtcb	100	94.851	Stegastes_partitus
ENSAMEG00000016152	RTCB	100	99.802	ENSSSCG00000000158	RTCB	100	99.802	Sus_scrofa
ENSAMEG00000016152	RTCB	100	97.426	ENSTGUG00000010947	RTCB	99	97.426	Taeniopygia_guttata
ENSAMEG00000016152	RTCB	91	95.435	ENSTRUG00000009880	rtcb	100	95.435	Takifugu_rubripes
ENSAMEG00000016152	RTCB	100	93.465	ENSTNIG00000002484	rtcb	100	93.465	Tetraodon_nigroviridis
ENSAMEG00000016152	RTCB	100	85.941	ENSTBEG00000004418	RTCB	100	85.941	Tupaia_belangeri
ENSAMEG00000016152	RTCB	93	98.723	ENSTTRG00000006417	RTCB	100	98.723	Tursiops_truncatus
ENSAMEG00000016152	RTCB	100	100.000	ENSUAMG00000022792	RTCB	100	100.000	Ursus_americanus
ENSAMEG00000016152	RTCB	100	100.000	ENSUMAG00000017225	RTCB	100	100.000	Ursus_maritimus
ENSAMEG00000016152	RTCB	100	99.604	ENSVPAG00000005375	RTCB	100	99.604	Vicugna_pacos
ENSAMEG00000016152	RTCB	100	100.000	ENSVVUG00000023408	RTCB	100	100.000	Vulpes_vulpes
ENSAMEG00000016152	RTCB	100	94.653	ENSXETG00000011523	rtcb	100	94.653	Xenopus_tropicalis
ENSAMEG00000016152	RTCB	100	94.851	ENSXMAG00000002855	rtcb	100	94.851	Xiphophorus_maculatus