EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000016227 (Gene tree)
Gene ID: 100473967
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 6351 bases
Position: chrGL193214.1:661034-667384
Accession: 100473967
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000017133	PseudoU_synth_2	PF00849.22	7.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000017835	RPUSD3-201	1056	-	ENSAMEP00000017133	352 (aa)	XP_002925088	D2HRA6

Gene Model

Click here to download ENSAMEG00000016227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000016227's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000016227	RPUSD3	80	30.405	ENSAMEG00000000127	-	73	30.405

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000016227	RPUSD3	100	80.682	ENSG00000156990	RPUSD3	100	80.682	Homo_sapiens
ENSAMEG00000016227	RPUSD3	79	53.214	ENSACAG00000009836	RPUSD3	94	48.358	Anolis_carolinensis
ENSAMEG00000016227	RPUSD3	54	80.952	ENSANAG00000038118	-	90	80.952	Aotus_nancymaae
ENSAMEG00000016227	RPUSD3	57	82.000	ENSANAG00000019945	-	80	82.000	Aotus_nancymaae
ENSAMEG00000016227	RPUSD3	78	60.627	ENSANAG00000007127	-	98	60.627	Aotus_nancymaae
ENSAMEG00000016227	RPUSD3	98	79.651	ENSBTAG00000007968	RPUSD3	100	79.651	Bos_taurus
ENSAMEG00000016227	RPUSD3	100	90.909	ENSCAFG00000029733	RPUSD3	100	90.909	Canis_familiaris
ENSAMEG00000016227	RPUSD3	100	90.909	ENSCAFG00020008582	RPUSD3	100	90.909	Canis_lupus_dingo
ENSAMEG00000016227	RPUSD3	98	78.198	ENSCHIG00000026027	RPUSD3	100	78.198	Capra_hircus
ENSAMEG00000016227	RPUSD3	99	75.214	ENSTSYG00000009994	RPUSD3	100	75.214	Carlito_syrichta
ENSAMEG00000016227	RPUSD3	75	78.327	ENSCAPG00000017559	RPUSD3	99	78.327	Cavia_aperea
ENSAMEG00000016227	RPUSD3	99	65.616	ENSCPOG00000037956	RPUSD3	92	65.616	Cavia_porcellus
ENSAMEG00000016227	RPUSD3	100	78.409	ENSCCAG00000029530	RPUSD3	100	78.409	Cebus_capucinus
ENSAMEG00000016227	RPUSD3	100	80.114	ENSCATG00000036939	RPUSD3	100	80.114	Cercocebus_atys
ENSAMEG00000016227	RPUSD3	100	79.830	ENSCSAG00000010506	RPUSD3	100	79.830	Chlorocebus_sabaeus
ENSAMEG00000016227	RPUSD3	50	83.929	ENSCHOG00000010151	-	67	83.929	Choloepus_hoffmanni
ENSAMEG00000016227	RPUSD3	73	53.307	ENSCPBG00000008825	RPUSD3	95	52.529	Chrysemys_picta_bellii
ENSAMEG00000016227	RPUSD3	100	80.114	ENSCANG00000040711	RPUSD3	100	80.114	Colobus_angolensis_palliatus
ENSAMEG00000016227	RPUSD3	99	71.470	ENSCGRG00001004923	Rpusd3	96	71.470	Cricetulus_griseus_chok1gshd
ENSAMEG00000016227	RPUSD3	97	72.141	ENSCGRG00000018315	Rpusd3	99	72.141	Cricetulus_griseus_crigri
ENSAMEG00000016227	RPUSD3	94	75.455	ENSDNOG00000039160	RPUSD3	87	75.455	Dasypus_novemcinctus
ENSAMEG00000016227	RPUSD3	74	75.000	ENSDORG00000026827	Rpusd3	92	75.000	Dipodomys_ordii
ENSAMEG00000016227	RPUSD3	100	73.580	ENSETEG00000006538	RPUSD3	99	73.580	Echinops_telfairi
ENSAMEG00000016227	RPUSD3	67	36.066	ENSEBUG00000015605	RPUSD3	78	36.066	Eptatretus_burgeri
ENSAMEG00000016227	RPUSD3	100	82.955	ENSEASG00005014160	RPUSD3	98	82.955	Equus_asinus_asinus
ENSAMEG00000016227	RPUSD3	100	82.102	ENSECAG00000019988	RPUSD3	98	82.102	Equus_caballus
ENSAMEG00000016227	RPUSD3	97	58.501	ENSEEUG00000007353	RPUSD3	98	58.501	Erinaceus_europaeus
ENSAMEG00000016227	RPUSD3	100	88.068	ENSFCAG00000014199	RPUSD3	100	88.068	Felis_catus
ENSAMEG00000016227	RPUSD3	77	48.718	ENSFALG00000012968	RPUSD3	99	48.718	Ficedula_albicollis
ENSAMEG00000016227	RPUSD3	75	78.113	ENSFDAG00000008350	RPUSD3	82	78.113	Fukomys_damarensis
ENSAMEG00000016227	RPUSD3	74	54.753	ENSGAGG00000007493	RPUSD3	82	53.992	Gopherus_agassizii
ENSAMEG00000016227	RPUSD3	100	80.398	ENSGGOG00000013120	RPUSD3	100	80.398	Gorilla_gorilla
ENSAMEG00000016227	RPUSD3	84	75.932	ENSHGLG00000011722	RPUSD3	74	75.932	Heterocephalus_glaber_female
ENSAMEG00000016227	RPUSD3	84	75.932	ENSHGLG00100016038	RPUSD3	74	75.932	Heterocephalus_glaber_male
ENSAMEG00000016227	RPUSD3	100	75.568	ENSSTOG00000002125	RPUSD3	100	75.568	Ictidomys_tridecemlineatus
ENSAMEG00000016227	RPUSD3	98	71.512	ENSJJAG00000012679	Rpusd3	100	71.512	Jaculus_jaculus
ENSAMEG00000016227	RPUSD3	98	79.070	ENSLAFG00000017501	RPUSD3	100	79.070	Loxodonta_africana
ENSAMEG00000016227	RPUSD3	100	79.830	ENSMFAG00000032407	RPUSD3	100	79.830	Macaca_fascicularis
ENSAMEG00000016227	RPUSD3	100	76.136	ENSMMUG00000010628	RPUSD3	97	82.372	Macaca_mulatta
ENSAMEG00000016227	RPUSD3	100	79.830	ENSMNEG00000040308	RPUSD3	100	79.830	Macaca_nemestrina
ENSAMEG00000016227	RPUSD3	100	80.114	ENSMLEG00000033940	RPUSD3	100	80.114	Mandrillus_leucophaeus
ENSAMEG00000016227	RPUSD3	98	73.256	ENSMAUG00000015473	Rpusd3	100	73.256	Mesocricetus_auratus
ENSAMEG00000016227	RPUSD3	98	78.779	ENSMICG00000002315	RPUSD3	100	78.779	Microcebus_murinus
ENSAMEG00000016227	RPUSD3	98	70.058	ENSMOCG00000022613	Rpusd3	100	70.058	Microtus_ochrogaster
ENSAMEG00000016227	RPUSD3	94	57.100	ENSMODG00000005210	RPUSD3	87	55.589	Monodelphis_domestica
ENSAMEG00000016227	RPUSD3	98	71.221	MGP_CAROLIEiJ_G0028725	Rpusd3	100	71.221	Mus_caroli
ENSAMEG00000016227	RPUSD3	98	72.093	ENSMUSG00000051169	Rpusd3	100	72.093	Mus_musculus
ENSAMEG00000016227	RPUSD3	98	71.802	MGP_PahariEiJ_G0022476	Rpusd3	100	71.802	Mus_pahari
ENSAMEG00000016227	RPUSD3	98	71.221	MGP_SPRETEiJ_G0029753	Rpusd3	100	71.221	Mus_spretus
ENSAMEG00000016227	RPUSD3	100	88.920	ENSMPUG00000017132	RPUSD3	100	88.920	Mustela_putorius_furo
ENSAMEG00000016227	RPUSD3	98	82.370	ENSMLUG00000006135	RPUSD3	99	82.370	Myotis_lucifugus
ENSAMEG00000016227	RPUSD3	97	70.088	ENSNGAG00000023704	Rpusd3	99	70.088	Nannospalax_galili
ENSAMEG00000016227	RPUSD3	100	66.477	ENSNLEG00000004214	RPUSD3	95	82.673	Nomascus_leucogenys
ENSAMEG00000016227	RPUSD3	74	63.985	ENSMEUG00000013098	-	100	63.985	Notamacropus_eugenii
ENSAMEG00000016227	RPUSD3	97	62.319	ENSOPRG00000002300	RPUSD3	98	62.319	Ochotona_princeps
ENSAMEG00000016227	RPUSD3	75	78.788	ENSODEG00000018137	RPUSD3	91	78.788	Octodon_degus
ENSAMEG00000016227	RPUSD3	81	49.477	ENSOANG00000012081	-	99	48.772	Ornithorhynchus_anatinus
ENSAMEG00000016227	RPUSD3	98	66.952	ENSOCUG00000027885	RPUSD3	100	66.952	Oryctolagus_cuniculus
ENSAMEG00000016227	RPUSD3	89	80.255	ENSOGAG00000012592	RPUSD3	100	80.255	Otolemur_garnettii
ENSAMEG00000016227	RPUSD3	99	79.487	ENSOARG00000005928	RPUSD3	99	79.487	Ovis_aries
ENSAMEG00000016227	RPUSD3	99	80.802	ENSPPAG00000038083	RPUSD3	99	80.802	Pan_paniscus
ENSAMEG00000016227	RPUSD3	100	87.500	ENSPPRG00000024433	RPUSD3	100	87.500	Panthera_pardus
ENSAMEG00000016227	RPUSD3	98	88.663	ENSPTIG00000006828	RPUSD3	100	88.663	Panthera_tigris_altaica
ENSAMEG00000016227	RPUSD3	99	80.516	ENSPTRG00000051760	RPUSD3	99	80.516	Pan_troglodytes
ENSAMEG00000016227	RPUSD3	100	80.114	ENSPANG00000023885	RPUSD3	100	80.114	Papio_anubis
ENSAMEG00000016227	RPUSD3	98	71.512	ENSPEMG00000017245	Rpusd3	100	71.512	Peromyscus_maniculatus_bairdii
ENSAMEG00000016227	RPUSD3	94	58.308	ENSPCIG00000021901	RPUSD3	94	56.798	Phascolarctos_cinereus
ENSAMEG00000016227	RPUSD3	99	80.516	ENSPPYG00000013676	RPUSD3	99	80.516	Pongo_abelii
ENSAMEG00000016227	RPUSD3	82	61.938	ENSPCAG00000013731	-	100	61.938	Procavia_capensis
ENSAMEG00000016227	RPUSD3	100	80.398	ENSPCOG00000018314	RPUSD3	100	80.398	Propithecus_coquereli
ENSAMEG00000016227	RPUSD3	100	80.398	ENSPVAG00000011107	RPUSD3	100	80.398	Pteropus_vampyrus
ENSAMEG00000016227	RPUSD3	98	67.442	ENSRNOG00000009084	Rpusd3	100	67.442	Rattus_norvegicus
ENSAMEG00000016227	RPUSD3	99	80.516	ENSRBIG00000041230	RPUSD3	99	80.516	Rhinopithecus_bieti
ENSAMEG00000016227	RPUSD3	99	80.802	ENSRROG00000043328	RPUSD3	99	80.802	Rhinopithecus_roxellana
ENSAMEG00000016227	RPUSD3	100	78.409	ENSSBOG00000036106	RPUSD3	100	78.409	Saimiri_boliviensis_boliviensis
ENSAMEG00000016227	RPUSD3	88	58.576	ENSSHAG00000015536	RPUSD3	99	56.958	Sarcophilus_harrisii
ENSAMEG00000016227	RPUSD3	100	79.545	ENSSSCG00000011555	RPUSD3	100	79.545	Sus_scrofa
ENSAMEG00000016227	RPUSD3	62	49.770	ENSTGUG00000008744	RPUSD3	93	49.770	Taeniopygia_guttata
ENSAMEG00000016227	RPUSD3	82	75.779	ENSTBEG00000000176	RPUSD3	100	75.779	Tupaia_belangeri
ENSAMEG00000016227	RPUSD3	100	80.966	ENSTTRG00000007544	RPUSD3	100	80.966	Tursiops_truncatus
ENSAMEG00000016227	RPUSD3	89	96.815	ENSUAMG00000011354	RPUSD3	98	96.815	Ursus_americanus
ENSAMEG00000016227	RPUSD3	100	96.307	ENSUMAG00000018830	RPUSD3	100	96.307	Ursus_maritimus
ENSAMEG00000016227	RPUSD3	98	92.151	ENSVVUG00000023735	RPUSD3	100	92.151	Vulpes_vulpes
ENSAMEG00000016227	RPUSD3	79	48.399	ENSXETG00000023546	rpusd3	99	48.399	Xenopus_tropicalis