EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000016232 (Gene tree)
Gene ID: 100463622
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 138331 bases
Position: chrGL192338.1:74838-213168
Accession: 25701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000017178	ResIII	PF04851.15	4e-06	1	1
ENSAMEP00000017178	BRK	PF07533.16	8.3e-31	1	2
ENSAMEP00000017178	BRK	PF07533.16	8.3e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000017883	CHD9-201	8712	-	ENSAMEP00000017178	2903 (aa)	-	G1MCV0

Gene Model

Click here to download ENSAMEG00000016232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000016232's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000016232	CHD9	68	68.384	ENSAMEG00000006307	CHD8	71	68.619
ENSAMEG00000016232	CHD9	71	63.570	ENSAMEG00000009496	CHD6	78	63.570

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000016232	CHD9	100	96.383	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSAMEG00000016232	CHD9	84	71.183	ENSAPOG00000023034	chd9	99	60.535	Acanthochromis_polyacanthus
ENSAMEG00000016232	CHD9	55	73.995	ENSACIG00000004097	chd9	73	61.963	Amphilophus_citrinellus
ENSAMEG00000016232	CHD9	79	71.500	ENSAOCG00000005487	chd9	67	75.640	Amphiprion_ocellaris
ENSAMEG00000016232	CHD9	84	71.459	ENSAPEG00000009859	chd9	67	75.581	Amphiprion_percula
ENSAMEG00000016232	CHD9	79	71.417	ENSATEG00000002748	chd9	97	64.452	Anabas_testudineus
ENSAMEG00000016232	CHD9	99	84.253	ENSAPLG00000002826	CHD9	74	85.969	Anas_platyrhynchos
ENSAMEG00000016232	CHD9	99	80.512	ENSACAG00000016150	CHD9	98	80.824	Anolis_carolinensis
ENSAMEG00000016232	CHD9	100	96.384	ENSANAG00000015630	CHD9	100	97.070	Aotus_nancymaae
ENSAMEG00000016232	CHD9	79	70.737	ENSACLG00000016899	chd9	73	63.438	Astatotilapia_calliptera
ENSAMEG00000016232	CHD9	99	61.584	ENSAMXG00000005652	chd9	68	75.164	Astyanax_mexicanus
ENSAMEG00000016232	CHD9	100	97.106	ENSBTAG00000002287	CHD9	100	97.106	Bos_taurus
ENSAMEG00000016232	CHD9	100	95.660	ENSCJAG00000001573	CHD9	100	97.436	Callithrix_jacchus
ENSAMEG00000016232	CHD9	100	98.623	ENSCAFG00000009699	CHD9	100	98.623	Canis_familiaris
ENSAMEG00000016232	CHD9	100	98.623	ENSCAFG00020002879	CHD9	100	99.267	Canis_lupus_dingo
ENSAMEG00000016232	CHD9	100	94.110	ENSCHIG00000021000	CHD9	100	94.282	Capra_hircus
ENSAMEG00000016232	CHD9	100	96.555	ENSTSYG00000007693	CHD9	100	98.535	Carlito_syrichta
ENSAMEG00000016232	CHD9	81	78.925	ENSCAPG00000011604	CHD9	81	79.681	Cavia_aperea
ENSAMEG00000016232	CHD9	100	91.563	ENSCPOG00000036544	CHD9	100	91.185	Cavia_porcellus
ENSAMEG00000016232	CHD9	100	95.627	ENSCCAG00000036178	CHD9	100	96.703	Cebus_capucinus
ENSAMEG00000016232	CHD9	100	95.559	ENSCATG00000036753	CHD9	100	97.436	Cercocebus_atys
ENSAMEG00000016232	CHD9	99	95.284	ENSCLAG00000007137	CHD9	99	96.879	Chinchilla_lanigera
ENSAMEG00000016232	CHD9	100	95.697	ENSCSAG00000005311	CHD9	100	95.731	Chlorocebus_sabaeus
ENSAMEG00000016232	CHD9	74	98.077	ENSCHOG00000003935	CHD9	76	98.077	Choloepus_hoffmanni
ENSAMEG00000016232	CHD9	99	85.571	ENSCPBG00000012459	CHD9	99	92.052	Chrysemys_picta_bellii
ENSAMEG00000016232	CHD9	100	96.110	ENSCANG00000030349	CHD9	100	97.436	Colobus_angolensis_palliatus
ENSAMEG00000016232	CHD9	99	92.294	ENSCGRG00001016150	Chd9	99	91.635	Cricetulus_griseus_chok1gshd
ENSAMEG00000016232	CHD9	99	92.294	ENSCGRG00000012850	Chd9	99	95.838	Cricetulus_griseus_crigri
ENSAMEG00000016232	CHD9	79	68.461	ENSCSEG00000009209	chd9	67	72.619	Cynoglossus_semilaevis
ENSAMEG00000016232	CHD9	85	71.067	ENSCVAG00000016195	chd9	99	61.181	Cyprinodon_variegatus
ENSAMEG00000016232	CHD9	81	68.841	ENSDARG00000074498	chd9	68	74.103	Danio_rerio
ENSAMEG00000016232	CHD9	81	95.665	ENSDNOG00000006045	CHD9	100	95.665	Dasypus_novemcinctus
ENSAMEG00000016232	CHD9	69	93.165	ENSDORG00000008523	-	100	92.769	Dipodomys_ordii
ENSAMEG00000016232	CHD9	94	97.368	ENSETEG00000009565	CHD9	94	97.368	Echinops_telfairi
ENSAMEG00000016232	CHD9	100	97.176	ENSEASG00005014832	CHD9	100	97.176	Equus_asinus_asinus
ENSAMEG00000016232	CHD9	100	97.142	ENSECAG00000011505	CHD9	100	97.142	Equus_caballus
ENSAMEG00000016232	CHD9	81	97.790	ENSEEUG00000014515	CHD9	86	97.790	Erinaceus_europaeus
ENSAMEG00000016232	CHD9	75	75.130	ENSELUG00000006031	chd9	92	74.679	Esox_lucius
ENSAMEG00000016232	CHD9	100	98.105	ENSFCAG00000022534	CHD9	100	98.901	Felis_catus
ENSAMEG00000016232	CHD9	83	87.672	ENSFALG00000013276	CHD9	99	87.880	Ficedula_albicollis
ENSAMEG00000016232	CHD9	100	94.904	ENSFDAG00000021037	CHD9	100	94.490	Fukomys_damarensis
ENSAMEG00000016232	CHD9	84	70.481	ENSFHEG00000006068	chd9	98	68.176	Fundulus_heteroclitus
ENSAMEG00000016232	CHD9	67	77.001	ENSGMOG00000006040	chd9	83	77.069	Gadus_morhua
ENSAMEG00000016232	CHD9	96	85.627	ENSGALG00000039178	CHD9	99	85.384	Gallus_gallus
ENSAMEG00000016232	CHD9	84	70.725	ENSGAFG00000010014	chd9	98	68.349	Gambusia_affinis
ENSAMEG00000016232	CHD9	81	67.432	ENSGACG00000016694	chd9	96	75.183	Gasterosteus_aculeatus
ENSAMEG00000016232	CHD9	100	96.040	ENSGGOG00000014816	CHD9	100	97.802	Gorilla_gorilla
ENSAMEG00000016232	CHD9	79	71.326	ENSHBUG00000023322	chd9	96	70.280	Haplochromis_burtoni
ENSAMEG00000016232	CHD9	100	94.800	ENSHGLG00000014938	CHD9	99	97.341	Heterocephalus_glaber_female
ENSAMEG00000016232	CHD9	90	66.733	ENSHCOG00000000937	chd9	69	73.451	Hippocampus_comes
ENSAMEG00000016232	CHD9	80	70.331	ENSIPUG00000016448	chd9	98	72.727	Ictalurus_punctatus
ENSAMEG00000016232	CHD9	100	94.833	ENSSTOG00000022273	CHD9	99	97.572	Ictidomys_tridecemlineatus
ENSAMEG00000016232	CHD9	69	94.094	ENSJJAG00000015741	-	100	94.045	Jaculus_jaculus
ENSAMEG00000016232	CHD9	84	70.353	ENSKMAG00000016784	chd9	66	75.074	Kryptolebias_marmoratus
ENSAMEG00000016232	CHD9	92	63.349	ENSLBEG00000012077	chd9	99	62.566	Labrus_bergylta
ENSAMEG00000016232	CHD9	99	72.026	ENSLACG00000005557	CHD9	99	72.144	Latimeria_chalumnae
ENSAMEG00000016232	CHD9	87	72.978	ENSLOCG00000007225	chd9	99	73.826	Lepisosteus_oculatus
ENSAMEG00000016232	CHD9	100	95.250	ENSLAFG00000015374	CHD9	100	95.250	Loxodonta_africana
ENSAMEG00000016232	CHD9	100	96.007	ENSMFAG00000041354	CHD9	100	97.436	Macaca_fascicularis
ENSAMEG00000016232	CHD9	100	96.041	ENSMMUG00000016310	CHD9	100	97.436	Macaca_mulatta
ENSAMEG00000016232	CHD9	100	96.179	ENSMNEG00000031494	CHD9	100	96.407	Macaca_nemestrina
ENSAMEG00000016232	CHD9	100	96.041	ENSMLEG00000043219	CHD9	100	97.436	Mandrillus_leucophaeus
ENSAMEG00000016232	CHD9	79	71.086	ENSMAMG00000003909	chd9	99	61.135	Mastacembelus_armatus
ENSAMEG00000016232	CHD9	84	71.596	ENSMZEG00005006581	chd9	67	75.895	Maylandia_zebra
ENSAMEG00000016232	CHD9	95	79.240	ENSMGAG00000004642	CHD9	72	81.200	Meleagris_gallopavo
ENSAMEG00000016232	CHD9	100	96.417	ENSMICG00000016679	CHD9	100	97.436	Microcebus_murinus
ENSAMEG00000016232	CHD9	73	81.191	ENSMODG00000013142	-	99	92.743	Monodelphis_domestica
ENSAMEG00000016232	CHD9	99	90.811	MGP_CAROLIEiJ_G0031364	Chd9	99	90.465	Mus_caroli
ENSAMEG00000016232	CHD9	99	91.048	ENSMUSG00000056608	Chd9	99	95.145	Mus_musculus
ENSAMEG00000016232	CHD9	99	88.916	MGP_PahariEiJ_G0022964	Chd9	99	88.569	Mus_pahari
ENSAMEG00000016232	CHD9	99	90.423	MGP_SPRETEiJ_G0032483	Chd9	99	90.146	Mus_spretus
ENSAMEG00000016232	CHD9	100	98.588	ENSMPUG00000003285	CHD9	100	98.588	Mustela_putorius_furo
ENSAMEG00000016232	CHD9	100	95.143	ENSMLUG00000004456	CHD9	100	94.798	Myotis_lucifugus
ENSAMEG00000016232	CHD9	84	71.207	ENSNBRG00000009423	chd9	67	75.759	Neolamprologus_brichardi
ENSAMEG00000016232	CHD9	90	96.476	ENSNLEG00000001026	CHD9	100	96.476	Nomascus_leucogenys
ENSAMEG00000016232	CHD9	76	96.732	ENSMEUG00000008222	-	84	96.732	Notamacropus_eugenii
ENSAMEG00000016232	CHD9	85	97.714	ENSOPRG00000011168	CHD9	85	97.714	Ochotona_princeps
ENSAMEG00000016232	CHD9	99	94.764	ENSODEG00000004466	CHD9	99	94.348	Octodon_degus
ENSAMEG00000016232	CHD9	79	72.145	ENSONIG00000002816	chd9	87	63.073	Oreochromis_niloticus
ENSAMEG00000016232	CHD9	100	86.963	ENSOANG00000013401	CHD9	100	87.031	Ornithorhynchus_anatinus
ENSAMEG00000016232	CHD9	83	97.313	ENSOCUG00000001016	CHD9	99	97.313	Oryctolagus_cuniculus
ENSAMEG00000016232	CHD9	84	70.763	ENSORLG00000013810	chd9	67	74.910	Oryzias_latipes
ENSAMEG00000016232	CHD9	84	70.741	ENSORLG00015019126	chd9	81	62.796	Oryzias_latipes_hsok
ENSAMEG00000016232	CHD9	100	95.697	ENSOGAG00000002110	CHD9	100	95.043	Otolemur_garnettii
ENSAMEG00000016232	CHD9	100	96.869	ENSOARG00000017664	CHD9	100	96.869	Ovis_aries
ENSAMEG00000016232	CHD9	83	96.020	ENSPPAG00000039388	-	100	96.020	Pan_paniscus
ENSAMEG00000016232	CHD9	100	98.002	ENSPPRG00000004801	CHD9	100	98.535	Panthera_pardus
ENSAMEG00000016232	CHD9	100	97.038	ENSPTIG00000021854	CHD9	100	97.038	Panthera_tigris_altaica
ENSAMEG00000016232	CHD9	100	96.417	ENSPTRG00000008113	CHD9	100	97.802	Pan_troglodytes
ENSAMEG00000016232	CHD9	100	96.007	ENSPANG00000019307	CHD9	100	97.436	Papio_anubis
ENSAMEG00000016232	CHD9	99	59.044	ENSPKIG00000025401	-	71	63.494	Paramormyrops_kingsleyae
ENSAMEG00000016232	CHD9	97	63.309	ENSPKIG00000021876	chd9	68	77.240	Paramormyrops_kingsleyae
ENSAMEG00000016232	CHD9	64	85.027	ENSPSIG00000008099	CHD9	99	85.027	Pelodiscus_sinensis
ENSAMEG00000016232	CHD9	59	57.487	ENSPMAG00000006035	-	72	67.739	Petromyzon_marinus
ENSAMEG00000016232	CHD9	89	87.980	ENSPCIG00000017215	CHD9	97	90.489	Phascolarctos_cinereus
ENSAMEG00000016232	CHD9	84	70.670	ENSPFOG00000015839	chd9	99	60.248	Poecilia_formosa
ENSAMEG00000016232	CHD9	84	70.767	ENSPLAG00000011118	chd9	98	68.924	Poecilia_latipinna
ENSAMEG00000016232	CHD9	84	71.245	ENSPMEG00000015106	chd9	99	60.698	Poecilia_mexicana
ENSAMEG00000016232	CHD9	84	71.752	ENSPREG00000006473	chd9	98	68.436	Poecilia_reticulata
ENSAMEG00000016232	CHD9	100	96.245	ENSPPYG00000007348	CHD9	100	96.245	Pongo_abelii
ENSAMEG00000016232	CHD9	77	96.415	ENSPCAG00000007564	CHD9	86	96.415	Procavia_capensis
ENSAMEG00000016232	CHD9	100	95.453	ENSPCOG00000028433	CHD9	100	98.535	Propithecus_coquereli
ENSAMEG00000016232	CHD9	97	95.010	ENSPVAG00000015617	CHD9	98	94.925	Pteropus_vampyrus
ENSAMEG00000016232	CHD9	84	71.722	ENSPNYG00000010947	chd9	66	75.759	Pundamilia_nyererei
ENSAMEG00000016232	CHD9	86	68.111	ENSPNAG00000024141	chd9	68	75.583	Pygocentrus_nattereri
ENSAMEG00000016232	CHD9	90	87.543	ENSRNOG00000049302	Chd9	100	90.095	Rattus_norvegicus
ENSAMEG00000016232	CHD9	83	96.941	ENSRBIG00000035553	CHD9	100	97.436	Rhinopithecus_bieti
ENSAMEG00000016232	CHD9	82	97.037	ENSRROG00000033278	CHD9	100	97.436	Rhinopithecus_roxellana
ENSAMEG00000016232	CHD9	100	95.799	ENSSBOG00000030240	CHD9	100	96.703	Saimiri_boliviensis_boliviensis
ENSAMEG00000016232	CHD9	99	88.370	ENSSHAG00000002719	CHD9	100	87.831	Sarcophilus_harrisii
ENSAMEG00000016232	CHD9	97	64.007	ENSSFOG00015020209	chd9	99	70.755	Scleropages_formosus
ENSAMEG00000016232	CHD9	99	61.777	ENSSFOG00015001327	chd9	67	75.908	Scleropages_formosus
ENSAMEG00000016232	CHD9	84	70.029	ENSSMAG00000008953	chd9	99	62.695	Scophthalmus_maximus
ENSAMEG00000016232	CHD9	84	70.714	ENSSDUG00000006139	chd9	98	68.364	Seriola_dumerili
ENSAMEG00000016232	CHD9	84	71.201	ENSSLDG00000017818	chd9	98	68.830	Seriola_lalandi_dorsalis
ENSAMEG00000016232	CHD9	97	94.696	ENSSARG00000010632	CHD9	97	94.696	Sorex_araneus
ENSAMEG00000016232	CHD9	84	70.701	ENSSPAG00000021649	chd9	67	75.119	Stegastes_partitus
ENSAMEG00000016232	CHD9	100	94.914	ENSSSCG00000033591	CHD9	100	95.086	Sus_scrofa
ENSAMEG00000016232	CHD9	90	85.512	ENSTGUG00000007476	CHD9	100	85.703	Taeniopygia_guttata
ENSAMEG00000016232	CHD9	86	69.560	ENSTRUG00000009125	chd9	73	63.045	Takifugu_rubripes
ENSAMEG00000016232	CHD9	57	81.951	ENSTNIG00000003825	chd9	85	81.951	Tetraodon_nigroviridis
ENSAMEG00000016232	CHD9	64	97.802	ENSTBEG00000016052	-	79	97.802	Tupaia_belangeri
ENSAMEG00000016232	CHD9	90	96.553	ENSTTRG00000012674	CHD9	90	96.553	Tursiops_truncatus
ENSAMEG00000016232	CHD9	64	96.950	ENSUAMG00000022706	CHD9	100	99.267	Ursus_americanus
ENSAMEG00000016232	CHD9	90	96.756	ENSUMAG00000004043	CHD9	99	98.827	Ursus_maritimus
ENSAMEG00000016232	CHD9	97	96.466	ENSVPAG00000001374	CHD9	97	96.466	Vicugna_pacos
ENSAMEG00000016232	CHD9	100	98.691	ENSVVUG00000019435	CHD9	100	98.691	Vulpes_vulpes
ENSAMEG00000016232	CHD9	99	73.188	ENSXETG00000000349	chd9	96	77.106	Xenopus_tropicalis
ENSAMEG00000016232	CHD9	79	71.562	ENSXCOG00000012997	chd9	98	69.122	Xiphophorus_couchianus
ENSAMEG00000016232	CHD9	84	71.212	ENSXMAG00000016192	chd9	98	68.888	Xiphophorus_maculatus