EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000016234 (Gene tree)
Gene ID: -
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 13707 bases
Position: chrGL192421.1:2187294-2201000
Accession: 13997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000017139	zf-C2H2	PF00096.26	4.1e-13	1	2
ENSAMEP00000017139	zf-C2H2	PF00096.26	4.1e-13	2	2
ENSAMEP00000017138	zf-C2H2	PF00096.26	4.6e-13	1	2
ENSAMEP00000017138	zf-C2H2	PF00096.26	4.6e-13	2	2
ENSAMEP00000017139	zf-met	PF12874.7	2.1e-07	1	1
ENSAMEP00000017138	zf-met	PF12874.7	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000017841	PRDM12-202	960	-	ENSAMEP00000017139	320 (aa)	-	G1MCR1
ENSAMET00000017840	PRDM12-201	990	-	ENSAMEP00000017138	330 (aa)	-	G1MCR0

Gene Model

Click here to download ENSAMEG00000016234's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000016234's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000016234	PRDM12	58	45.946	ENSAMEG00000003050	PRDM5	81	45.946

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000016234	PRDM12	99	95.046	ENSG00000130711	PRDM12	88	95.046	Homo_sapiens
ENSAMEG00000016234	PRDM12	99	79.070	ENSAPOG00000016051	prdm12b	90	79.070	Acanthochromis_polyacanthus
ENSAMEG00000016234	PRDM12	99	67.284	ENSAPOG00000018234	-	92	65.579	Acanthochromis_polyacanthus
ENSAMEG00000016234	PRDM12	99	78.551	ENSACIG00000005193	-	91	78.261	Amphilophus_citrinellus
ENSAMEG00000016234	PRDM12	99	80.712	ENSACIG00000019578	prdm12b	90	81.009	Amphilophus_citrinellus
ENSAMEG00000016234	PRDM12	99	81.009	ENSAOCG00000015040	prdm12b	89	81.009	Amphiprion_ocellaris
ENSAMEG00000016234	PRDM12	99	81.437	ENSAPEG00000015092	prdm12b	89	81.737	Amphiprion_percula
ENSAMEG00000016234	PRDM12	99	79.091	ENSAPEG00000022849	-	86	78.723	Amphiprion_percula
ENSAMEG00000016234	PRDM12	99	81.098	ENSATEG00000014595	-	96	80.793	Anabas_testudineus
ENSAMEG00000016234	PRDM12	99	95.046	ENSANAG00000020616	PRDM12	95	95.046	Aotus_nancymaae
ENSAMEG00000016234	PRDM12	99	83.489	ENSACLG00000011876	prdm12b	89	83.540	Astatotilapia_calliptera
ENSAMEG00000016234	PRDM12	99	78.886	ENSACLG00000007631	-	87	78.886	Astatotilapia_calliptera
ENSAMEG00000016234	PRDM12	99	85.410	ENSAMXG00000033665	prdm12b	89	85.714	Astyanax_mexicanus
ENSAMEG00000016234	PRDM12	99	83.699	ENSAMXG00000008540	PRDM12	89	83.699	Astyanax_mexicanus
ENSAMEG00000016234	PRDM12	99	95.046	ENSBTAG00000023797	PRDM12	89	95.046	Bos_taurus
ENSAMEG00000016234	PRDM12	99	95.046	ENSCJAG00000020540	PRDM12	90	95.046	Callithrix_jacchus
ENSAMEG00000016234	PRDM12	87	93.262	ENSCAFG00000023076	PRDM12	88	93.262	Canis_familiaris
ENSAMEG00000016234	PRDM12	99	95.046	ENSCAFG00020024046	PRDM12	89	95.046	Canis_lupus_dingo
ENSAMEG00000016234	PRDM12	99	95.046	ENSCHIG00000025005	PRDM12	89	95.046	Capra_hircus
ENSAMEG00000016234	PRDM12	96	94.534	ENSCPOG00000005901	PRDM12	98	91.641	Cavia_porcellus
ENSAMEG00000016234	PRDM12	99	95.046	ENSCCAG00000037485	PRDM12	89	95.046	Cebus_capucinus
ENSAMEG00000016234	PRDM12	99	95.046	ENSCATG00000020327	PRDM12	89	95.046	Cercocebus_atys
ENSAMEG00000016234	PRDM12	99	93.498	ENSCLAG00000005499	PRDM12	88	93.498	Chinchilla_lanigera
ENSAMEG00000016234	PRDM12	99	95.046	ENSCSAG00000014756	PRDM12	89	95.046	Chlorocebus_sabaeus
ENSAMEG00000016234	PRDM12	99	91.022	ENSCPBG00000022628	PRDM12	91	91.022	Chrysemys_picta_bellii
ENSAMEG00000016234	PRDM12	99	94.427	ENSCGRG00001015005	Prdm12	88	94.427	Cricetulus_griseus_chok1gshd
ENSAMEG00000016234	PRDM12	99	81.081	ENSCVAG00000017166	prdm12b	90	80.781	Cyprinodon_variegatus
ENSAMEG00000016234	PRDM12	99	76.590	ENSCVAG00000000944	-	89	76.590	Cyprinodon_variegatus
ENSAMEG00000016234	PRDM12	99	85.714	ENSDARG00000007430	prdm12b	90	85.714	Danio_rerio
ENSAMEG00000016234	PRDM12	99	94.462	ENSDNOG00000042302	PRDM12	90	94.462	Dasypus_novemcinctus
ENSAMEG00000016234	PRDM12	98	64.265	ENSEBUG00000016780	prdm12b	77	65.706	Eptatretus_burgeri
ENSAMEG00000016234	PRDM12	99	95.046	ENSEASG00005008472	PRDM12	89	95.046	Equus_asinus_asinus
ENSAMEG00000016234	PRDM12	99	95.046	ENSECAG00000005933	PRDM12	89	95.046	Equus_caballus
ENSAMEG00000016234	PRDM12	99	83.072	ENSELUG00000013674	PRDM12	89	83.072	Esox_lucius
ENSAMEG00000016234	PRDM12	99	84.337	ENSELUG00000009905	prdm12b	89	84.337	Esox_lucius
ENSAMEG00000016234	PRDM12	99	95.046	ENSFCAG00000043086	PRDM12	89	95.046	Felis_catus
ENSAMEG00000016234	PRDM12	99	91.641	ENSFALG00000001445	PRDM12	81	91.641	Ficedula_albicollis
ENSAMEG00000016234	PRDM12	99	80.060	ENSFHEG00000003944	prdm12b	90	80.655	Fundulus_heteroclitus
ENSAMEG00000016234	PRDM12	99	79.290	ENSFHEG00000007746	-	88	78.994	Fundulus_heteroclitus
ENSAMEG00000016234	PRDM12	99	82.716	ENSGMOG00000011797	prdm12b	91	82.407	Gadus_morhua
ENSAMEG00000016234	PRDM12	99	91.641	ENSGALG00000003895	PRDM12	91	91.641	Gallus_gallus
ENSAMEG00000016234	PRDM12	99	82.424	ENSGAFG00000010827	prdm12b	88	82.121	Gambusia_affinis
ENSAMEG00000016234	PRDM12	99	81.928	ENSGACG00000016713	prdm12b	89	81.627	Gasterosteus_aculeatus
ENSAMEG00000016234	PRDM12	99	91.331	ENSGAGG00000014083	PRDM12	91	91.331	Gopherus_agassizii
ENSAMEG00000016234	PRDM12	99	94.737	ENSGGOG00000010568	PRDM12	88	94.737	Gorilla_gorilla
ENSAMEG00000016234	PRDM12	99	78.886	ENSHBUG00000022537	-	80	78.886	Haplochromis_burtoni
ENSAMEG00000016234	PRDM12	99	81.493	ENSHBUG00000022878	prdm12b	90	81.493	Haplochromis_burtoni
ENSAMEG00000016234	PRDM12	99	93.498	ENSHGLG00000013939	PRDM12	88	93.498	Heterocephalus_glaber_female
ENSAMEG00000016234	PRDM12	99	78.592	ENSHCOG00000003663	prdm12b	87	78.947	Hippocampus_comes
ENSAMEG00000016234	PRDM12	99	77.301	ENSHCOG00000021167	-	92	77.301	Hippocampus_comes
ENSAMEG00000016234	PRDM12	99	84.802	ENSIPUG00000017053	prdm12b	89	85.106	Ictalurus_punctatus
ENSAMEG00000016234	PRDM12	99	80.303	ENSIPUG00000019544	PRDM12	90	80.428	Ictalurus_punctatus
ENSAMEG00000016234	PRDM12	99	94.427	ENSSTOG00000005986	PRDM12	85	94.427	Ictidomys_tridecemlineatus
ENSAMEG00000016234	PRDM12	99	94.427	ENSJJAG00000005424	Prdm12	98	94.427	Jaculus_jaculus
ENSAMEG00000016234	PRDM12	99	76.420	ENSKMAG00000016921	prdm12b	87	77.273	Kryptolebias_marmoratus
ENSAMEG00000016234	PRDM12	99	81.538	ENSKMAG00000021205	-	92	80.308	Kryptolebias_marmoratus
ENSAMEG00000016234	PRDM12	99	81.982	ENSLBEG00000017769	prdm12b	88	82.583	Labrus_bergylta
ENSAMEG00000016234	PRDM12	99	81.250	ENSLBEG00000007776	-	88	81.250	Labrus_bergylta
ENSAMEG00000016234	PRDM12	99	88.854	ENSLACG00000017560	PRDM12	91	88.545	Latimeria_chalumnae
ENSAMEG00000016234	PRDM12	99	85.231	ENSLOCG00000005429	prdm12b	89	85.106	Lepisosteus_oculatus
ENSAMEG00000016234	PRDM12	99	93.617	ENSLAFG00000006979	PRDM12	88	93.617	Loxodonta_africana
ENSAMEG00000016234	PRDM12	99	95.046	ENSMFAG00000040322	PRDM12	88	95.046	Macaca_fascicularis
ENSAMEG00000016234	PRDM12	99	95.046	ENSMNEG00000037234	PRDM12	89	95.046	Macaca_nemestrina
ENSAMEG00000016234	PRDM12	99	80.967	ENSMAMG00000018988	-	86	80.967	Mastacembelus_armatus
ENSAMEG00000016234	PRDM12	99	80.952	ENSMAMG00000013212	prdm12b	90	80.655	Mastacembelus_armatus
ENSAMEG00000016234	PRDM12	99	78.886	ENSMZEG00005000415	PRDM12	86	78.886	Maylandia_zebra
ENSAMEG00000016234	PRDM12	99	91.641	ENSMGAG00000005438	PRDM12	91	91.641	Meleagris_gallopavo
ENSAMEG00000016234	PRDM12	99	94.427	ENSMAUG00000013040	Prdm12	88	94.427	Mesocricetus_auratus
ENSAMEG00000016234	PRDM12	99	95.046	ENSMICG00000015480	PRDM12	89	95.046	Microcebus_murinus
ENSAMEG00000016234	PRDM12	99	94.118	ENSMOCG00000021026	Prdm12	88	94.118	Microtus_ochrogaster
ENSAMEG00000016234	PRDM12	99	92.260	ENSMODG00000012108	PRDM12	91	91.950	Monodelphis_domestica
ENSAMEG00000016234	PRDM12	99	68.675	ENSMALG00000021901	prdm12b	88	68.468	Monopterus_albus
ENSAMEG00000016234	PRDM12	99	94.427	MGP_CAROLIEiJ_G0023414	Prdm12	88	94.427	Mus_caroli
ENSAMEG00000016234	PRDM12	99	94.427	ENSMUSG00000079466	Prdm12	88	94.427	Mus_musculus
ENSAMEG00000016234	PRDM12	99	94.427	MGP_PahariEiJ_G0024871	Prdm12	88	94.427	Mus_pahari
ENSAMEG00000016234	PRDM12	99	94.427	MGP_SPRETEiJ_G0024331	Prdm12	88	94.427	Mus_spretus
ENSAMEG00000016234	PRDM12	99	93.808	ENSNGAG00000018480	Prdm12	92	93.808	Nannospalax_galili
ENSAMEG00000016234	PRDM12	99	80.531	ENSNBRG00000006727	prdm12b	90	80.473	Neolamprologus_brichardi
ENSAMEG00000016234	PRDM12	99	75.749	ENSNBRG00000024312	-	93	76.347	Neolamprologus_brichardi
ENSAMEG00000016234	PRDM12	82	98.795	ENSMEUG00000003828	PRDM12	76	98.795	Notamacropus_eugenii
ENSAMEG00000016234	PRDM12	99	94.118	ENSOPRG00000008680	PRDM12	98	94.118	Ochotona_princeps
ENSAMEG00000016234	PRDM12	99	94.118	ENSODEG00000016282	PRDM12	61	94.118	Octodon_degus
ENSAMEG00000016234	PRDM12	58	89.894	ENSOANG00000001043	PRDM12	87	89.894	Ornithorhynchus_anatinus
ENSAMEG00000016234	PRDM12	92	90.970	ENSOCUG00000008241	PRDM12	96	90.970	Oryctolagus_cuniculus
ENSAMEG00000016234	PRDM12	99	78.824	ENSORLG00000017558	-	87	79.118	Oryzias_latipes
ENSAMEG00000016234	PRDM12	99	80.294	ENSORLG00000007114	prdm12b	90	80.588	Oryzias_latipes
ENSAMEG00000016234	PRDM12	99	78.592	ENSORLG00020013167	-	87	78.886	Oryzias_latipes_hni
ENSAMEG00000016234	PRDM12	99	80.000	ENSORLG00020019565	prdm12b	89	80.294	Oryzias_latipes_hni
ENSAMEG00000016234	PRDM12	99	80.352	ENSORLG00015007621	prdm12b	90	80.352	Oryzias_latipes_hsok
ENSAMEG00000016234	PRDM12	99	78.824	ENSORLG00015003435	-	87	79.118	Oryzias_latipes_hsok
ENSAMEG00000016234	PRDM12	99	79.009	ENSOMEG00000004134	prdm12b	90	79.592	Oryzias_melastigma
ENSAMEG00000016234	PRDM12	99	77.457	ENSOMEG00000007762	-	92	77.457	Oryzias_melastigma
ENSAMEG00000016234	PRDM12	99	95.046	ENSOGAG00000007557	PRDM12	97	95.046	Otolemur_garnettii
ENSAMEG00000016234	PRDM12	90	92.440	ENSPPAG00000031506	-	99	92.440	Pan_paniscus
ENSAMEG00000016234	PRDM12	99	86.111	ENSPPRG00000023024	PRDM12	83	86.111	Panthera_pardus
ENSAMEG00000016234	PRDM12	99	95.046	ENSPTRG00000043324	-	88	95.046	Pan_troglodytes
ENSAMEG00000016234	PRDM12	99	95.046	ENSPTRG00000021475	PRDM12	88	95.046	Pan_troglodytes
ENSAMEG00000016234	PRDM12	99	95.046	ENSPANG00000025967	PRDM12	89	95.046	Papio_anubis
ENSAMEG00000016234	PRDM12	99	79.817	ENSPKIG00000004305	PRDM12	94	79.817	Paramormyrops_kingsleyae
ENSAMEG00000016234	PRDM12	99	83.832	ENSPKIG00000007228	prdm12b	90	84.431	Paramormyrops_kingsleyae
ENSAMEG00000016234	PRDM12	99	90.402	ENSPSIG00000006739	PRDM12	91	90.402	Pelodiscus_sinensis
ENSAMEG00000016234	PRDM12	99	80.556	ENSPMGG00000002356	-	85	81.173	Periophthalmus_magnuspinnatus
ENSAMEG00000016234	PRDM12	99	83.232	ENSPMGG00000008867	prdm12b	89	83.232	Periophthalmus_magnuspinnatus
ENSAMEG00000016234	PRDM12	99	94.427	ENSPEMG00000009969	Prdm12	89	94.427	Peromyscus_maniculatus_bairdii
ENSAMEG00000016234	PRDM12	99	92.570	ENSPCIG00000024119	PRDM12	91	92.260	Phascolarctos_cinereus
ENSAMEG00000016234	PRDM12	99	81.493	ENSPFOG00000019841	prdm12b	91	80.896	Poecilia_formosa
ENSAMEG00000016234	PRDM12	99	82.727	ENSPLAG00000016626	prdm12b	87	82.424	Poecilia_latipinna
ENSAMEG00000016234	PRDM12	97	81.988	ENSPMEG00000016698	prdm12b	88	81.677	Poecilia_mexicana
ENSAMEG00000016234	PRDM12	99	82.727	ENSPREG00000015073	prdm12b	87	82.424	Poecilia_reticulata
ENSAMEG00000016234	PRDM12	96	78.997	ENSPREG00000003211	-	89	78.683	Poecilia_reticulata
ENSAMEG00000016234	PRDM12	99	95.046	ENSPPYG00000019694	PRDM12	92	95.046	Pongo_abelii
ENSAMEG00000016234	PRDM12	99	95.046	ENSPCOG00000022255	PRDM12	88	95.046	Propithecus_coquereli
ENSAMEG00000016234	PRDM12	99	94.737	ENSPVAG00000001511	PRDM12	88	94.737	Pteropus_vampyrus
ENSAMEG00000016234	PRDM12	99	80.473	ENSPNYG00000009607	prdm12b	90	79.525	Pundamilia_nyererei
ENSAMEG00000016234	PRDM12	99	78.886	ENSPNYG00000013589	-	86	78.886	Pundamilia_nyererei
ENSAMEG00000016234	PRDM12	99	85.410	ENSPNAG00000024532	prdm12b	89	85.410	Pygocentrus_nattereri
ENSAMEG00000016234	PRDM12	99	80.556	ENSPNAG00000013396	PRDM12	88	80.247	Pygocentrus_nattereri
ENSAMEG00000016234	PRDM12	99	94.427	ENSRNOG00000009218	Prdm12	88	94.427	Rattus_norvegicus
ENSAMEG00000016234	PRDM12	97	95.238	ENSRBIG00000042712	PRDM12	88	94.081	Rhinopithecus_bieti
ENSAMEG00000016234	PRDM12	98	95.298	ENSRROG00000043554	PRDM12	99	95.298	Rhinopithecus_roxellana
ENSAMEG00000016234	PRDM12	99	91.975	ENSSHAG00000015972	PRDM12	91	91.667	Sarcophilus_harrisii
ENSAMEG00000016234	PRDM12	99	78.324	ENSSMAG00000003754	prdm12b	89	78.613	Scophthalmus_maximus
ENSAMEG00000016234	PRDM12	99	80.117	ENSSDUG00000023498	prdm12b	90	79.825	Seriola_dumerili
ENSAMEG00000016234	PRDM12	99	84.326	ENSSDUG00000019071	-	90	84.326	Seriola_dumerili
ENSAMEG00000016234	PRDM12	99	79.532	ENSSLDG00000009557	prdm12b	90	79.532	Seriola_lalandi_dorsalis
ENSAMEG00000016234	PRDM12	99	83.077	ENSSLDG00000013562	-	93	83.077	Seriola_lalandi_dorsalis
ENSAMEG00000016234	PRDM12	99	91.022	ENSSPUG00000013424	PRDM12	91	91.022	Sphenodon_punctatus
ENSAMEG00000016234	PRDM12	99	80.178	ENSSPAG00000018824	prdm12b	89	80.178	Stegastes_partitus
ENSAMEG00000016234	PRDM12	99	74.375	ENSSPAG00000022420	-	86	74.375	Stegastes_partitus
ENSAMEG00000016234	PRDM12	99	95.046	ENSSSCG00000005703	PRDM12	89	95.046	Sus_scrofa
ENSAMEG00000016234	PRDM12	99	82.675	ENSTRUG00000018659	prdm12b	89	82.675	Takifugu_rubripes
ENSAMEG00000016234	PRDM12	99	79.819	ENSTRUG00000013239	-	93	79.819	Takifugu_rubripes
ENSAMEG00000016234	PRDM12	99	80.864	ENSTNIG00000005859	-	92	79.630	Tetraodon_nigroviridis
ENSAMEG00000016234	PRDM12	99	83.636	ENSTNIG00000009020	prdm12b	89	83.333	Tetraodon_nigroviridis
ENSAMEG00000016234	PRDM12	99	95.046	ENSUAMG00000009653	PRDM12	89	95.046	Ursus_americanus
ENSAMEG00000016234	PRDM12	99	95.046	ENSVVUG00000027662	PRDM12	77	95.046	Vulpes_vulpes
ENSAMEG00000016234	PRDM12	99	83.030	ENSXCOG00000002836	prdm12b	88	82.727	Xiphophorus_couchianus
ENSAMEG00000016234	PRDM12	99	81.682	ENSXMAG00000005537	prdm12b	89	81.437	Xiphophorus_maculatus
ENSAMEG00000016234	PRDM12	99	80.363	ENSXMAG00000028012	-	87	80.303	Xiphophorus_maculatus