EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000016289 (Gene tree)
Gene ID: 100465577
Gene Symbol: NCL
Alias: C23|Nsr1
Full Name: nucleolin
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 9254 bases
Position: chrGL192536.1:298043-307296
Accession: 100465577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000017259	RRM_1	PF00076.22	1.2e-58	1	4
ENSAMEP00000017259	RRM_1	PF00076.22	1.2e-58	2	4
ENSAMEP00000017259	RRM_1	PF00076.22	1.2e-58	3	4
ENSAMEP00000017259	RRM_1	PF00076.22	1.2e-58	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000017966	NCL-201	2154	-	ENSAMEP00000017259	717 (aa)	XP_002917484	G1MD31

Gene Model

Click here to download ENSAMEG00000016289's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000016289's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000016289	NCL	62	93.679	ENSG00000115053	NCL	100	90.541	Homo_sapiens
ENSAMEG00000016289	NCL	99	69.731	ENSANAG00000024378	-	85	80.303	Aotus_nancymaae
ENSAMEG00000016289	NCL	53	96.570	ENSANAG00000035814	-	62	97.039	Aotus_nancymaae
ENSAMEG00000016289	NCL	54	90.984	ENSBTAG00000050728	-	81	90.984	Bos_taurus
ENSAMEG00000016289	NCL	76	92.977	ENSBTAG00000026909	-	95	92.977	Bos_taurus
ENSAMEG00000016289	NCL	94	86.988	ENSBTAG00000016174	NCL	61	98.405	Bos_taurus
ENSAMEG00000016289	NCL	53	96.570	ENSCJAG00000013538	NCL	62	97.039	Callithrix_jacchus
ENSAMEG00000016289	NCL	92	94.073	ENSCAFG00000011037	NCL	53	99.208	Canis_familiaris
ENSAMEG00000016289	NCL	84	93.884	ENSCAFG00020023145	NCL	56	99.208	Canis_lupus_dingo
ENSAMEG00000016289	NCL	92	63.623	ENSCHIG00000012143	-	60	82.586	Capra_hircus
ENSAMEG00000016289	NCL	92	80.816	ENSCHIG00000026149	-	53	90.765	Capra_hircus
ENSAMEG00000016289	NCL	75	96.903	ENSCHIG00000021052	-	96	96.853	Capra_hircus
ENSAMEG00000016289	NCL	85	88.543	ENSCHIG00000010894	-	66	98.405	Capra_hircus
ENSAMEG00000016289	NCL	90	68.837	ENSTSYG00000036886	-	75	85.185	Carlito_syrichta
ENSAMEG00000016289	NCL	92	87.443	ENSTSYG00000004355	-	53	96.834	Carlito_syrichta
ENSAMEG00000016289	NCL	95	84.948	ENSTSYG00000029779	-	50	95.973	Carlito_syrichta
ENSAMEG00000016289	NCL	91	78.931	ENSCAPG00000009405	NCL	61	89.749	Cavia_aperea
ENSAMEG00000016289	NCL	92	81.997	ENSCPOG00000001034	NCL	62	94.077	Cavia_porcellus
ENSAMEG00000016289	NCL	56	88.442	ENSCCAG00000000551	-	76	88.557	Cebus_capucinus
ENSAMEG00000016289	NCL	53	96.570	ENSCCAG00000021040	-	62	94.533	Cebus_capucinus
ENSAMEG00000016289	NCL	92	89.681	ENSCATG00000037033	NCL	62	97.494	Cercocebus_atys
ENSAMEG00000016289	NCL	92	83.207	ENSCLAG00000013080	NCL	61	94.305	Chinchilla_lanigera
ENSAMEG00000016289	NCL	61	97.273	ENSCSAG00000006660	NCL	95	97.273	Chlorocebus_sabaeus
ENSAMEG00000016289	NCL	61	76.538	ENSCHOG00000012860	NCL	78	81.481	Choloepus_hoffmanni
ENSAMEG00000016289	NCL	92	80.728	ENSCGRG00001024315	-	53	88.654	Cricetulus_griseus_chok1gshd
ENSAMEG00000016289	NCL	85	82.334	ENSCGRG00000017894	-	54	88.654	Cricetulus_griseus_crigri
ENSAMEG00000016289	NCL	92	86.970	ENSDNOG00000010783	-	100	84.722	Dasypus_novemcinctus
ENSAMEG00000016289	NCL	100	75.694	ENSDNOG00000046347	-	63	81.179	Dasypus_novemcinctus
ENSAMEG00000016289	NCL	51	72.951	ENSDORG00000023596	-	52	71.968	Dipodomys_ordii
ENSAMEG00000016289	NCL	53	83.377	ENSDORG00000012513	-	54	83.377	Dipodomys_ordii
ENSAMEG00000016289	NCL	53	90.451	ENSETEG00000014756	-	86	90.501	Echinops_telfairi
ENSAMEG00000016289	NCL	71	66.938	ENSETEG00000008139	-	89	66.757	Echinops_telfairi
ENSAMEG00000016289	NCL	62	61.261	ENSETEG00000008553	-	80	64.737	Echinops_telfairi
ENSAMEG00000016289	NCL	85	80.424	ENSETEG00000018937	-	53	91.029	Echinops_telfairi
ENSAMEG00000016289	NCL	89	92.691	ENSEASG00005008488	NCL	91	91.913	Equus_asinus_asinus
ENSAMEG00000016289	NCL	92	92.564	ENSECAG00000021868	NCL	92	91.502	Equus_caballus
ENSAMEG00000016289	NCL	85	81.699	ENSEEUG00000005913	NCL	54	90.501	Erinaceus_europaeus
ENSAMEG00000016289	NCL	92	93.475	ENSFCAG00000027622	NCL	53	99.472	Felis_catus
ENSAMEG00000016289	NCL	91	85.213	ENSFDAG00000014291	NCL	62	94.533	Fukomys_damarensis
ENSAMEG00000016289	NCL	92	88.923	ENSGGOG00000004300	NCL	81	88.383	Gorilla_gorilla
ENSAMEG00000016289	NCL	92	84.743	ENSHGLG00000002031	-	62	94.761	Heterocephalus_glaber_female
ENSAMEG00000016289	NCL	91	75.457	ENSHGLG00000011069	-	55	85.450	Heterocephalus_glaber_female
ENSAMEG00000016289	NCL	72	84.267	ENSHGLG00100000745	-	82	84.350	Heterocephalus_glaber_male
ENSAMEG00000016289	NCL	92	84.441	ENSHGLG00100014537	-	62	94.533	Heterocephalus_glaber_male
ENSAMEG00000016289	NCL	55	82.097	ENSJJAG00000016165	Ncl	55	82.097	Jaculus_jaculus
ENSAMEG00000016289	NCL	91	74.429	ENSLAFG00000013061	NCL	77	85.564	Loxodonta_africana
ENSAMEG00000016289	NCL	92	89.833	ENSMFAG00000040385	NCL	62	97.494	Macaca_fascicularis
ENSAMEG00000016289	NCL	92	89.833	ENSMMUG00000018094	NCL	62	97.494	Macaca_mulatta
ENSAMEG00000016289	NCL	79	98.636	ENSMNEG00000023839	NCL	64	97.494	Macaca_nemestrina
ENSAMEG00000016289	NCL	92	89.833	ENSMLEG00000028935	NCL	62	97.494	Mandrillus_leucophaeus
ENSAMEG00000016289	NCL	92	69.559	ENSMICG00000029975	-	86	79.608	Microcebus_murinus
ENSAMEG00000016289	NCL	100	88.178	ENSMICG00000002538	-	53	96.834	Microcebus_murinus
ENSAMEG00000016289	NCL	92	77.812	MGP_CAROLIEiJ_G0014362	Ncl	53	86.544	Mus_caroli
ENSAMEG00000016289	NCL	92	77.812	ENSMUSG00000026234	Ncl	53	86.280	Mus_musculus
ENSAMEG00000016289	NCL	92	76.364	MGP_PahariEiJ_G0027599	Ncl	53	86.280	Mus_pahari
ENSAMEG00000016289	NCL	92	77.997	MGP_SPRETEiJ_G0015164	Ncl	53	86.280	Mus_spretus
ENSAMEG00000016289	NCL	92	87.029	ENSMLUG00000014547	NCL	53	97.889	Myotis_lucifugus
ENSAMEG00000016289	NCL	92	79.701	ENSNGAG00000002454	-	53	89.710	Nannospalax_galili
ENSAMEG00000016289	NCL	52	73.600	ENSNGAG00000006188	-	52	73.879	Nannospalax_galili
ENSAMEG00000016289	NCL	85	76.630	ENSNLEG00000014107	-	60	82.390	Nomascus_leucogenys
ENSAMEG00000016289	NCL	91	66.195	ENSODEG00000007803	-	56	63.303	Octodon_degus
ENSAMEG00000016289	NCL	92	84.746	ENSODEG00000002441	-	89	84.746	Octodon_degus
ENSAMEG00000016289	NCL	91	80.851	ENSODEG00000003281	-	53	90.212	Octodon_degus
ENSAMEG00000016289	NCL	77	87.599	ENSOGAG00000027852	NCL	83	87.599	Otolemur_garnettii
ENSAMEG00000016289	NCL	54	80.829	ENSOARG00000004072	-	61	81.266	Ovis_aries
ENSAMEG00000016289	NCL	69	90.682	ENSOARG00000013710	-	64	95.778	Ovis_aries
ENSAMEG00000016289	NCL	91	83.612	ENSOARG00000020709	-	56	97.120	Ovis_aries
ENSAMEG00000016289	NCL	62	92.099	ENSPPAG00000011619	NCL	62	97.494	Pan_paniscus
ENSAMEG00000016289	NCL	92	93.769	ENSPPRG00000012603	NCL	53	99.208	Panthera_pardus
ENSAMEG00000016289	NCL	91	93.558	ENSPTIG00000010393	NCL	61	99.317	Panthera_tigris_altaica
ENSAMEG00000016289	NCL	92	89.650	ENSPTRG00000013025	NCL	81	88.383	Pan_troglodytes
ENSAMEG00000016289	NCL	92	89.833	ENSPANG00000010292	NCL	62	97.494	Papio_anubis
ENSAMEG00000016289	NCL	70	85.573	ENSPPYG00000013265	NCL	53	86.684	Pongo_abelii
ENSAMEG00000016289	NCL	91	81.804	ENSPCOG00000004160	-	86	89.418	Propithecus_coquereli
ENSAMEG00000016289	NCL	92	88.066	ENSPCOG00000003051	-	53	96.306	Propithecus_coquereli
ENSAMEG00000016289	NCL	92	88.956	ENSPVAG00000000297	NCL	62	98.633	Pteropus_vampyrus
ENSAMEG00000016289	NCL	92	79.123	ENSRNOG00000018273	Ncl	53	88.391	Rattus_norvegicus
ENSAMEG00000016289	NCL	92	84.170	ENSRBIG00000037525	-	54	94.459	Rhinopithecus_bieti
ENSAMEG00000016289	NCL	66	97.232	ENSRBIG00000035396	-	88	95.302	Rhinopithecus_bieti
ENSAMEG00000016289	NCL	92	89.074	ENSRROG00000028756	-	86	98.577	Rhinopithecus_roxellana
ENSAMEG00000016289	NCL	99	86.177	ENSRROG00000036103	-	54	95.495	Rhinopithecus_roxellana
ENSAMEG00000016289	NCL	81	89.294	ENSSBOG00000027549	-	94	89.294	Saimiri_boliviensis_boliviensis
ENSAMEG00000016289	NCL	53	96.306	ENSSBOG00000029193	-	62	96.811	Saimiri_boliviensis_boliviensis
ENSAMEG00000016289	NCL	55	74.429	ENSSBOG00000023094	-	76	74.661	Saimiri_boliviensis_boliviensis
ENSAMEG00000016289	NCL	92	89.023	ENSSSCG00000016275	NCL	52	97.889	Sus_scrofa
ENSAMEG00000016289	NCL	55	84.697	ENSTBEG00000001546	-	53	84.697	Tupaia_belangeri
ENSAMEG00000016289	NCL	65	81.870	ENSTBEG00000002469	-	66	81.714	Tupaia_belangeri
ENSAMEG00000016289	NCL	92	88.737	ENSTTRG00000009094	NCL	53	97.354	Tursiops_truncatus
ENSAMEG00000016289	NCL	73	96.962	ENSUAMG00000005639	NCL	100	98.211	Ursus_americanus
ENSAMEG00000016289	NCL	100	97.629	ENSUMAG00000015789	NCL	100	97.629	Ursus_maritimus
ENSAMEG00000016289	NCL	68	89.437	ENSVPAG00000001796	NCL	69	89.437	Vicugna_pacos
ENSAMEG00000016289	NCL	100	91.213	ENSVVUG00000025564	NCL	64	98.861	Vulpes_vulpes