EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000016564 (Gene tree)
Gene ID: 100473556
Gene Symbol: YBX2
Alias: CSDA3|Contrin|MSY2
Full Name: Y-box binding protein 2
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 140726 bases
Position: chrGL193146.1:465933-606658
Accession: 17948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000017499	CSD	PF00313.22	2.7e-26	1	1
ENSAMEP00000017495	CSD	PF00313.22	3.2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000018211	YBX2-202	657	-	ENSAMEP00000017499	219 (aa)	-	G1MDS1
ENSAMET00000018207	YBX2-201	735	-	ENSAMEP00000017495	245 (aa)	-	G1MDR7

Gene Model

Click here to download ENSAMEG00000016564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000016564's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000016564	YBX2	51	52.212	ENSAMEG00000008087	-	80	52.632

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000016564	YBX2	87	84.896	ENSG00000006047	YBX2	54	85.204	Homo_sapiens
ENSAMEG00000016564	YBX2	78	86.628	ENSANAG00000019540	YBX2	54	86.813	Aotus_nancymaae
ENSAMEG00000016564	YBX2	90	90.909	ENSBTAG00000009126	YBX2	54	90.816	Bos_taurus
ENSAMEG00000016564	YBX2	74	85.366	ENSCJAG00000042146	-	58	85.976	Callithrix_jacchus
ENSAMEG00000016564	YBX2	87	87.500	ENSCJAG00000016581	-	54	88.265	Callithrix_jacchus
ENSAMEG00000016564	YBX2	87	91.146	ENSCAFG00000016128	-	53	91.327	Canis_familiaris
ENSAMEG00000016564	YBX2	67	82.432	ENSCAFG00000005162	-	54	83.108	Canis_familiaris
ENSAMEG00000016564	YBX2	87	83.838	ENSCAFG00020008884	YBX2	55	84.158	Canis_lupus_dingo
ENSAMEG00000016564	YBX2	90	91.414	ENSCHIG00000016407	YBX2	54	91.327	Capra_hircus
ENSAMEG00000016564	YBX2	73	79.268	ENSTSYG00000030765	YBX2	55	79.878	Carlito_syrichta
ENSAMEG00000016564	YBX2	71	89.809	ENSCAPG00000011432	YBX2	59	90.446	Cavia_aperea
ENSAMEG00000016564	YBX2	87	91.146	ENSCPOG00000009543	YBX2	57	90.000	Cavia_porcellus
ENSAMEG00000016564	YBX2	87	89.583	ENSCCAG00000025671	YBX2	57	99.010	Cebus_capucinus
ENSAMEG00000016564	YBX2	87	87.500	ENSCATG00000036919	YBX2	55	87.755	Cercocebus_atys
ENSAMEG00000016564	YBX2	73	89.375	ENSCLAG00000010306	YBX2	57	90.000	Chinchilla_lanigera
ENSAMEG00000016564	YBX2	87	87.500	ENSCSAG00000011857	YBX2	55	87.755	Chlorocebus_sabaeus
ENSAMEG00000016564	YBX2	54	85.714	ENSCPBG00000022288	YBX2	52	73.885	Chrysemys_picta_bellii
ENSAMEG00000016564	YBX2	72	84.177	ENSCANG00000007129	YBX2	57	84.810	Colobus_angolensis_palliatus
ENSAMEG00000016564	YBX2	87	91.667	ENSCGRG00001000751	Ybx2	57	90.000	Cricetulus_griseus_chok1gshd
ENSAMEG00000016564	YBX2	72	89.308	ENSCGRG00000007683	Ybx2	59	89.375	Cricetulus_griseus_crigri
ENSAMEG00000016564	YBX2	73	87.500	ENSDNOG00000013746	YBX2	64	78.571	Dasypus_novemcinctus
ENSAMEG00000016564	YBX2	72	89.241	ENSDORG00000010882	Ybx2	56	89.873	Dipodomys_ordii
ENSAMEG00000016564	YBX2	89	84.184	ENSEASG00005018928	YBX2	56	84.184	Equus_asinus_asinus
ENSAMEG00000016564	YBX2	89	84.184	ENSECAG00000009996	YBX2	54	82.979	Equus_caballus
ENSAMEG00000016564	YBX2	85	90.909	ENSFCAG00000018097	YBX2	55	90.306	Felis_catus
ENSAMEG00000016564	YBX2	54	85.714	ENSGAGG00000016159	YBX2	59	77.358	Gopherus_agassizii
ENSAMEG00000016564	YBX2	87	85.417	ENSGGOG00000007399	YBX2	55	85.714	Gorilla_gorilla
ENSAMEG00000016564	YBX2	87	87.500	ENSHGLG00000014186	YBX2	54	87.755	Heterocephalus_glaber_female
ENSAMEG00000016564	YBX2	73	88.750	ENSSTOG00000008630	YBX2	58	89.375	Ictidomys_tridecemlineatus
ENSAMEG00000016564	YBX2	72	89.937	ENSJJAG00000013072	Ybx2	56	90.566	Jaculus_jaculus
ENSAMEG00000016564	YBX2	87	91.667	ENSLAFG00000014006	YBX2	55	91.837	Loxodonta_africana
ENSAMEG00000016564	YBX2	87	87.500	ENSMFAG00000039921	YBX2	55	87.755	Macaca_fascicularis
ENSAMEG00000016564	YBX2	87	87.500	ENSMNEG00000045221	YBX2	55	87.755	Macaca_nemestrina
ENSAMEG00000016564	YBX2	59	77.099	ENSMLEG00000029266	-	54	72.189	Mandrillus_leucophaeus
ENSAMEG00000016564	YBX2	91	72.277	ENSMLEG00000039452	YBX2	57	86.076	Mandrillus_leucophaeus
ENSAMEG00000016564	YBX2	87	91.667	ENSMAUG00000022062	Ybx2	55	91.837	Mesocricetus_auratus
ENSAMEG00000016564	YBX2	87	89.062	ENSMICG00000012453	YBX2	57	88.608	Microcebus_murinus
ENSAMEG00000016564	YBX2	87	90.625	ENSMOCG00000013958	Ybx2	57	90.000	Microtus_ochrogaster
ENSAMEG00000016564	YBX2	76	85.030	ENSMODG00000017596	YBX2	52	83.770	Monodelphis_domestica
ENSAMEG00000016564	YBX2	87	91.146	MGP_CAROLIEiJ_G0016606	Ybx2	57	90.000	Mus_caroli
ENSAMEG00000016564	YBX2	87	91.146	ENSMUSG00000018554	Ybx2	57	90.000	Mus_musculus
ENSAMEG00000016564	YBX2	87	91.146	MGP_PahariEiJ_G0017737	Ybx2	57	90.000	Mus_pahari
ENSAMEG00000016564	YBX2	87	91.146	MGP_SPRETEiJ_G0017442	Ybx2	57	90.000	Mus_spretus
ENSAMEG00000016564	YBX2	62	86.861	ENSMPUG00000010386	YBX2	53	87.591	Mustela_putorius_furo
ENSAMEG00000016564	YBX2	87	79.167	ENSMLUG00000004686	YBX2	59	79.592	Myotis_lucifugus
ENSAMEG00000016564	YBX2	87	90.104	ENSNGAG00000011707	Ybx2	55	90.306	Nannospalax_galili
ENSAMEG00000016564	YBX2	86	87.895	ENSNLEG00000008063	-	63	88.947	Nomascus_leucogenys
ENSAMEG00000016564	YBX2	76	79.042	ENSMEUG00000006947	YBX2	58	78.061	Notamacropus_eugenii
ENSAMEG00000016564	YBX2	82	82.778	ENSOPRG00000013773	YBX2	62	83.333	Ochotona_princeps
ENSAMEG00000016564	YBX2	87	89.062	ENSODEG00000017530	YBX2	57	89.375	Octodon_degus
ENSAMEG00000016564	YBX2	92	72.906	ENSOCUG00000015064	YBX2	63	73.604	Oryctolagus_cuniculus
ENSAMEG00000016564	YBX2	72	89.241	ENSOGAG00000004392	YBX2	59	89.873	Otolemur_garnettii
ENSAMEG00000016564	YBX2	84	84.865	ENSPPAG00000041892	YBX2	61	84.865	Pan_paniscus
ENSAMEG00000016564	YBX2	87	91.146	ENSPPRG00000000782	YBX2	55	91.327	Panthera_pardus
ENSAMEG00000016564	YBX2	92	67.488	ENSPTRG00000051288	-	50	81.410	Pan_troglodytes
ENSAMEG00000016564	YBX2	87	85.938	ENSPTRG00000008673	YBX2	58	99.010	Pan_troglodytes
ENSAMEG00000016564	YBX2	86	87.302	ENSPANG00000024250	YBX2	54	87.245	Papio_anubis
ENSAMEG00000016564	YBX2	76	70.060	ENSPANG00000032747	-	50	66.321	Papio_anubis
ENSAMEG00000016564	YBX2	55	83.740	ENSPSIG00000012364	YBX2	58	77.358	Pelodiscus_sinensis
ENSAMEG00000016564	YBX2	76	70.060	ENSPCIG00000028819	YBX2	53	69.898	Phascolarctos_cinereus
ENSAMEG00000016564	YBX2	89	88.776	ENSPCAG00000008019	YBX2	54	88.776	Procavia_capensis
ENSAMEG00000016564	YBX2	86	88.947	ENSPCOG00000006030	YBX2	55	88.776	Propithecus_coquereli
ENSAMEG00000016564	YBX2	90	76.884	ENSPVAG00000005050	YBX2	55	76.650	Pteropus_vampyrus
ENSAMEG00000016564	YBX2	87	91.146	ENSRNOG00000017117	Ybx2	55	91.327	Rattus_norvegicus
ENSAMEG00000016564	YBX2	87	86.979	ENSRBIG00000040919	YBX2	55	87.245	Rhinopithecus_bieti
ENSAMEG00000016564	YBX2	81	68.449	ENSRROG00000041728	YBX2	56	74.699	Rhinopithecus_roxellana
ENSAMEG00000016564	YBX2	86	77.895	ENSSBOG00000029566	YBX2	57	87.975	Saimiri_boliviensis_boliviensis
ENSAMEG00000016564	YBX2	76	77.647	ENSSHAG00000007786	YBX2	60	77.368	Sarcophilus_harrisii
ENSAMEG00000016564	YBX2	90	91.414	ENSSARG00000000488	YBX2	55	91.327	Sorex_araneus
ENSAMEG00000016564	YBX2	87	90.104	ENSSSCG00000017938	YBX2	54	90.306	Sus_scrofa
ENSAMEG00000016564	YBX2	86	89.474	ENSTBEG00000001266	YBX2	60	88.776	Tupaia_belangeri
ENSAMEG00000016564	YBX2	68	78.846	ENSUAMG00000014725	YBX2	59	79.487	Ursus_americanus
ENSAMEG00000016564	YBX2	68	77.707	ENSUMAG00000015222	YBX2	56	78.344	Ursus_maritimus
ENSAMEG00000016564	YBX2	62	81.618	ENSVPAG00000003104	-	56	82.353	Vicugna_pacos
ENSAMEG00000016564	YBX2	68	79.618	ENSVVUG00000027830	-	59	80.255	Vulpes_vulpes