EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000016834 (Gene tree)
Gene ID: 100484252
Gene Symbol: BMS1
Alias: BMS1L|KIAA0187
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 35446 bases
Position: chrGL192527.1:1526093-1561538
Accession: 100484252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000017820	AARP2CN	PF08142.12	3.5e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000018545	BMS1-201	3855	XM_011222414	ENSAMEP00000017820	1285 (aa)	XP_011220716	G1MEP1

Gene Model

Click here to download ENSAMEG00000016834's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000016834's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000016834	BMS1	99	89.899	ENSG00000165733	BMS1	99	89.588	Homo_sapiens
ENSAMEG00000016834	BMS1	71	73.077	ENSAPOG00000002296	bms1	99	60.192	Acanthochromis_polyacanthus
ENSAMEG00000016834	BMS1	77	80.217	ENSACIG00000002588	bms1	85	77.612	Amphilophus_citrinellus
ENSAMEG00000016834	BMS1	87	68.174	ENSAOCG00000018088	bms1	99	61.772	Amphiprion_ocellaris
ENSAMEG00000016834	BMS1	84	69.214	ENSAPEG00000014673	bms1	99	61.515	Amphiprion_percula
ENSAMEG00000016834	BMS1	95	72.559	ENSAPLG00000003759	BMS1	100	71.463	Anas_platyrhynchos
ENSAMEG00000016834	BMS1	99	70.859	ENSACAG00000004537	-	99	71.145	Anolis_carolinensis
ENSAMEG00000016834	BMS1	99	88.665	ENSANAG00000023432	BMS1	99	88.432	Aotus_nancymaae
ENSAMEG00000016834	BMS1	88	68.504	ENSACLG00000001294	bms1	99	62.229	Astatotilapia_calliptera
ENSAMEG00000016834	BMS1	99	90.606	ENSBTAG00000012878	BMS1	99	91.078	Bos_taurus
ENSAMEG00000016834	BMS1	80	52.392	WBGene00022021	Y61A9LA.10	99	52.214	Caenorhabditis_elegans
ENSAMEG00000016834	BMS1	99	88.975	ENSCJAG00000021705	BMS1	99	88.820	Callithrix_jacchus
ENSAMEG00000016834	BMS1	99	94.729	ENSCAFG00000007114	BMS1	99	94.186	Canis_familiaris
ENSAMEG00000016834	BMS1	99	94.729	ENSCAFG00020025282	BMS1	99	94.186	Canis_lupus_dingo
ENSAMEG00000016834	BMS1	99	90.217	ENSCHIG00000023251	BMS1	99	90.613	Capra_hircus
ENSAMEG00000016834	BMS1	99	80.808	ENSCAPG00000008652	BMS1	99	80.311	Cavia_aperea
ENSAMEG00000016834	BMS1	99	84.382	ENSCPOG00000000502	BMS1	99	84.436	Cavia_porcellus
ENSAMEG00000016834	BMS1	99	74.399	ENSCCAG00000024969	-	99	74.011	Cebus_capucinus
ENSAMEG00000016834	BMS1	90	67.591	ENSCATG00000008695	-	97	67.535	Cercocebus_atys
ENSAMEG00000016834	BMS1	99	90.140	ENSCATG00000030625	-	99	89.907	Cercocebus_atys
ENSAMEG00000016834	BMS1	99	85.381	ENSCLAG00000002446	BMS1	99	84.759	Chinchilla_lanigera
ENSAMEG00000016834	BMS1	99	90.295	ENSCSAG00000011118	BMS1	99	90.140	Chlorocebus_sabaeus
ENSAMEG00000016834	BMS1	99	86.047	ENSCHOG00000011055	BMS1	99	87.152	Choloepus_hoffmanni
ENSAMEG00000016834	BMS1	99	74.345	ENSCPBG00000025581	BMS1	99	72.975	Chrysemys_picta_bellii
ENSAMEG00000016834	BMS1	79	58.654	ENSCING00000003181	-	99	58.654	Ciona_intestinalis
ENSAMEG00000016834	BMS1	68	55.904	ENSCSAVG00000004113	-	88	55.374	Ciona_savignyi
ENSAMEG00000016834	BMS1	99	90.994	ENSCANG00000011609	BMS1	99	90.450	Colobus_angolensis_palliatus
ENSAMEG00000016834	BMS1	99	84.907	ENSCGRG00001019461	Bms1	99	84.598	Cricetulus_griseus_chok1gshd
ENSAMEG00000016834	BMS1	99	84.907	ENSCGRG00000009016	Bms1	99	84.598	Cricetulus_griseus_crigri
ENSAMEG00000016834	BMS1	81	73.427	ENSCSEG00000002469	bms1	50	68.720	Cynoglossus_semilaevis
ENSAMEG00000016834	BMS1	80	74.818	ENSCVAG00000008371	bms1	90	74.142	Cyprinodon_variegatus
ENSAMEG00000016834	BMS1	88	67.402	ENSDARG00000054154	bms1	94	67.857	Danio_rerio
ENSAMEG00000016834	BMS1	99	87.944	ENSDNOG00000015761	BMS1	99	89.009	Dasypus_novemcinctus
ENSAMEG00000016834	BMS1	99	87.598	ENSDORG00000002982	Bms1	99	87.529	Dipodomys_ordii
ENSAMEG00000016834	BMS1	78	57.946	FBgn0036686	CG7728	90	58.394	Drosophila_melanogaster
ENSAMEG00000016834	BMS1	85	83.929	ENSETEG00000009554	BMS1	91	83.929	Echinops_telfairi
ENSAMEG00000016834	BMS1	99	91.426	ENSEASG00005006894	BMS1	99	91.745	Equus_asinus_asinus
ENSAMEG00000016834	BMS1	99	91.193	ENSECAG00000001358	BMS1	99	91.667	Equus_caballus
ENSAMEG00000016834	BMS1	89	67.241	ENSELUG00000001756	bms1	94	67.483	Esox_lucius
ENSAMEG00000016834	BMS1	99	93.798	ENSFCAG00000011220	BMS1	99	93.643	Felis_catus
ENSAMEG00000016834	BMS1	99	71.559	ENSFALG00000006882	BMS1	99	72.027	Ficedula_albicollis
ENSAMEG00000016834	BMS1	99	83.826	ENSFDAG00000001422	BMS1	99	82.970	Fukomys_damarensis
ENSAMEG00000016834	BMS1	85	69.231	ENSFHEG00000003367	bms1	98	67.698	Fundulus_heteroclitus
ENSAMEG00000016834	BMS1	90	65.113	ENSGMOG00000000718	bms1	88	74.146	Gadus_morhua
ENSAMEG00000016834	BMS1	99	73.640	ENSGALG00000002624	BMS1	99	73.624	Gallus_gallus
ENSAMEG00000016834	BMS1	99	59.373	ENSGACG00000015334	bms1	89	66.080	Gasterosteus_aculeatus
ENSAMEG00000016834	BMS1	99	73.578	ENSGAGG00000003467	BMS1	99	73.385	Gopherus_agassizii
ENSAMEG00000016834	BMS1	87	68.218	ENSHBUG00000022628	bms1	99	61.879	Haplochromis_burtoni
ENSAMEG00000016834	BMS1	99	84.125	ENSHGLG00000000477	BMS1	99	83.346	Heterocephalus_glaber_female
ENSAMEG00000016834	BMS1	99	84.202	ENSHGLG00100002176	BMS1	99	83.424	Heterocephalus_glaber_male
ENSAMEG00000016834	BMS1	89	67.370	ENSHCOG00000017604	bms1	55	65.432	Hippocampus_comes
ENSAMEG00000016834	BMS1	96	73.016	ENSIPUG00000017855	bms1	60	58.787	Ictalurus_punctatus
ENSAMEG00000016834	BMS1	99	87.490	ENSSTOG00000015063	BMS1	99	87.811	Ictidomys_tridecemlineatus
ENSAMEG00000016834	BMS1	99	86.115	ENSJJAG00000017328	Bms1	99	86.349	Jaculus_jaculus
ENSAMEG00000016834	BMS1	62	62.312	ENSKMAG00000021982	bms1	81	73.288	Kryptolebias_marmoratus
ENSAMEG00000016834	BMS1	87	67.416	ENSLBEG00000028208	bms1	99	60.463	Labrus_bergylta
ENSAMEG00000016834	BMS1	99	61.256	ENSLACG00000001600	BMS1	100	61.145	Latimeria_chalumnae
ENSAMEG00000016834	BMS1	99	87.132	ENSLAFG00000006250	BMS1	99	86.899	Loxodonta_africana
ENSAMEG00000016834	BMS1	84	90.018	ENSMFAG00000037771	BMS1	99	90.018	Macaca_fascicularis
ENSAMEG00000016834	BMS1	90	76.305	ENSMMUG00000007426	-	99	75.706	Macaca_mulatta
ENSAMEG00000016834	BMS1	85	70.932	ENSMLEG00000029084	-	97	70.750	Mandrillus_leucophaeus
ENSAMEG00000016834	BMS1	99	59.397	ENSMAMG00000020855	bms1	88	74.453	Mastacembelus_armatus
ENSAMEG00000016834	BMS1	97	61.200	ENSMZEG00005005663	bms1	99	62.152	Maylandia_zebra
ENSAMEG00000016834	BMS1	95	72.364	ENSMGAG00000001170	BMS1	99	72.544	Meleagris_gallopavo
ENSAMEG00000016834	BMS1	99	85.459	ENSMAUG00000002195	Bms1	99	85.148	Mesocricetus_auratus
ENSAMEG00000016834	BMS1	99	89.087	ENSMICG00000009977	BMS1	99	88.768	Microcebus_murinus
ENSAMEG00000016834	BMS1	99	84.472	ENSMOCG00000002038	Bms1	99	84.305	Microtus_ochrogaster
ENSAMEG00000016834	BMS1	86	67.695	ENSMMOG00000000977	bms1	98	65.703	Mola_mola
ENSAMEG00000016834	BMS1	99	78.725	ENSMODG00000001177	BMS1	99	79.141	Monodelphis_domestica
ENSAMEG00000016834	BMS1	99	60.524	ENSMALG00000009680	bms1	99	59.923	Monopterus_albus
ENSAMEG00000016834	BMS1	70	94.928	MGP_CAROLIEiJ_G0028785	-	85	94.928	Mus_caroli
ENSAMEG00000016834	BMS1	99	84.419	ENSMUSG00000030138	Bms1	99	84.109	Mus_musculus
ENSAMEG00000016834	BMS1	99	84.950	MGP_PahariEiJ_G0022539	Bms1	99	84.484	Mus_pahari
ENSAMEG00000016834	BMS1	99	84.520	MGP_SPRETEiJ_G0029816	Bms1	100	84.121	Mus_spretus
ENSAMEG00000016834	BMS1	99	96.417	ENSMPUG00000017276	BMS1	99	96.417	Mustela_putorius_furo
ENSAMEG00000016834	BMS1	99	90.824	ENSMLUG00000003260	BMS1	99	89.891	Myotis_lucifugus
ENSAMEG00000016834	BMS1	95	81.327	ENSNGAG00000015258	Bms1	99	81.750	Nannospalax_galili
ENSAMEG00000016834	BMS1	99	87.966	ENSNLEG00000015791	BMS1	99	88.121	Nomascus_leucogenys
ENSAMEG00000016834	BMS1	81	95.498	ENSOPRG00000005195	BMS1	81	95.498	Ochotona_princeps
ENSAMEG00000016834	BMS1	99	84.370	ENSODEG00000005554	BMS1	99	84.059	Octodon_degus
ENSAMEG00000016834	BMS1	90	68.262	ENSONIG00000007227	bms1	99	61.783	Oreochromis_niloticus
ENSAMEG00000016834	BMS1	99	76.293	ENSOANG00000000662	-	99	75.822	Ornithorhynchus_anatinus
ENSAMEG00000016834	BMS1	99	87.034	ENSOCUG00000005354	BMS1	99	86.724	Oryctolagus_cuniculus
ENSAMEG00000016834	BMS1	88	68.811	ENSORLG00000014655	bms1	98	69.066	Oryzias_latipes
ENSAMEG00000016834	BMS1	88	68.182	ENSORLG00020016246	bms1	81	67.641	Oryzias_latipes_hni
ENSAMEG00000016834	BMS1	88	68.720	ENSORLG00015014183	bms1	87	68.411	Oryzias_latipes_hsok
ENSAMEG00000016834	BMS1	87	69.368	ENSOMEG00000015042	bms1	96	68.226	Oryzias_melastigma
ENSAMEG00000016834	BMS1	99	89.722	ENSOGAG00000006511	BMS1	99	89.637	Otolemur_garnettii
ENSAMEG00000016834	BMS1	99	90.388	ENSOARG00000003900	BMS1	99	90.860	Ovis_aries
ENSAMEG00000016834	BMS1	99	86.180	ENSPPAG00000027837	BMS1	99	85.870	Pan_paniscus
ENSAMEG00000016834	BMS1	99	93.566	ENSPPRG00000001311	BMS1	99	93.411	Panthera_pardus
ENSAMEG00000016834	BMS1	99	91.705	ENSPTIG00000009652	BMS1	99	91.318	Panthera_tigris_altaica
ENSAMEG00000016834	BMS1	99	90.054	ENSPTRG00000002441	BMS1	99	89.899	Pan_troglodytes
ENSAMEG00000016834	BMS1	99	71.559	ENSPSIG00000006481	BMS1	99	72.231	Pelodiscus_sinensis
ENSAMEG00000016834	BMS1	99	77.847	ENSPEMG00000022467	Bms1	99	77.924	Peromyscus_maniculatus_bairdii
ENSAMEG00000016834	BMS1	95	92.715	ENSPCIG00000001339	BMS1	99	86.723	Phascolarctos_cinereus
ENSAMEG00000016834	BMS1	79	74.265	ENSPFOG00000015180	bms1	97	65.944	Poecilia_formosa
ENSAMEG00000016834	BMS1	79	74.510	ENSPMEG00000023176	bms1	92	65.769	Poecilia_mexicana
ENSAMEG00000016834	BMS1	79	74.384	ENSPREG00000002695	bms1	99	67.040	Poecilia_reticulata
ENSAMEG00000016834	BMS1	60	87.500	ENSPPYG00000002836	-	99	86.735	Pongo_abelii
ENSAMEG00000016834	BMS1	73	95.238	ENSPCAG00000014528	BMS1	73	95.238	Procavia_capensis
ENSAMEG00000016834	BMS1	95	84.665	ENSPCOG00000023834	-	99	85.069	Propithecus_coquereli
ENSAMEG00000016834	BMS1	99	88.423	ENSPVAG00000000725	BMS1	99	88.811	Pteropus_vampyrus
ENSAMEG00000016834	BMS1	97	61.611	ENSPNYG00000018866	bms1	99	61.124	Pundamilia_nyererei
ENSAMEG00000016834	BMS1	82	81.792	ENSRNOG00000006576	Bms1	100	82.638	Rattus_norvegicus
ENSAMEG00000016834	BMS1	99	88.820	ENSRROG00000040101	BMS1	99	88.587	Rhinopithecus_roxellana
ENSAMEG00000016834	BMS1	74	46.257	YPL217C	-	82	45.992	Saccharomyces_cerevisiae
ENSAMEG00000016834	BMS1	99	89.441	ENSSBOG00000035778	BMS1	99	89.519	Saimiri_boliviensis_boliviensis
ENSAMEG00000016834	BMS1	99	78.211	ENSSHAG00000005062	BMS1	99	77.982	Sarcophilus_harrisii
ENSAMEG00000016834	BMS1	99	62.185	ENSSFOG00015022313	bms1	50	69.134	Scleropages_formosus
ENSAMEG00000016834	BMS1	69	76.667	ENSSARG00000014407	BMS1	100	76.667	Sorex_araneus
ENSAMEG00000016834	BMS1	99	72.171	ENSSPUG00000014454	BMS1	99	72.923	Sphenodon_punctatus
ENSAMEG00000016834	BMS1	99	91.304	ENSSSCG00000010198	BMS1	99	90.923	Sus_scrofa
ENSAMEG00000016834	BMS1	99	72.295	ENSTGUG00000006302	-	99	72.554	Taeniopygia_guttata
ENSAMEG00000016834	BMS1	87	64.160	ENSTRUG00000008028	bms1	99	63.020	Takifugu_rubripes
ENSAMEG00000016834	BMS1	99	58.631	ENSTNIG00000006216	bms1	84	70.387	Tetraodon_nigroviridis
ENSAMEG00000016834	BMS1	61	93.701	ENSTBEG00000001673	-	64	93.701	Tupaia_belangeri
ENSAMEG00000016834	BMS1	99	88.432	ENSTTRG00000007983	BMS1	99	87.898	Tursiops_truncatus
ENSAMEG00000016834	BMS1	99	98.519	ENSUAMG00000023996	BMS1	99	98.519	Ursus_americanus
ENSAMEG00000016834	BMS1	99	98.441	ENSUMAG00000016523	BMS1	99	98.441	Ursus_maritimus
ENSAMEG00000016834	BMS1	83	95.772	ENSVPAG00000007477	BMS1	95	95.772	Vicugna_pacos
ENSAMEG00000016834	BMS1	99	94.729	ENSVVUG00000021305	BMS1	99	94.186	Vulpes_vulpes
ENSAMEG00000016834	BMS1	98	65.016	ENSXETG00000008158	bms1	99	65.712	Xenopus_tropicalis
ENSAMEG00000016834	BMS1	86	66.528	ENSXCOG00000000506	bms1	96	75.485	Xiphophorus_couchianus
ENSAMEG00000016834	BMS1	85	66.883	ENSXMAG00000014236	bms1	97	65.896	Xiphophorus_maculatus