EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000017205 (Gene tree)
Gene ID: 100472984
Gene Symbol: USB1
Alias: C16orf57|FLJ13154|HVSL1|Mpn1
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 13490 bases
Position: chrGL192338.1:3858799-3872288
Accession: 100472984
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000018175	HVSL	PF09749.9	1.3e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000018914	USB1-201	810	XM_019795894	ENSAMEP00000018175	269 (aa)	XP_002912318	G1MFP5

Gene Model

Click here to download ENSAMEG00000017205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000017205's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000017205	USB1	100	81.784	ENSG00000103005	USB1	100	86.449	Homo_sapiens
ENSAMEG00000017205	USB1	98	48.387	ENSAPOG00000011942	usb1	83	51.931	Acanthochromis_polyacanthus
ENSAMEG00000017205	USB1	84	55.752	ENSACIG00000012234	usb1	83	55.752	Amphilophus_citrinellus
ENSAMEG00000017205	USB1	97	49.615	ENSAOCG00000014831	usb1	99	48.399	Amphiprion_ocellaris
ENSAMEG00000017205	USB1	97	50.000	ENSAPEG00000000296	usb1	99	48.754	Amphiprion_percula
ENSAMEG00000017205	USB1	98	50.000	ENSATEG00000009348	usb1	86	52.049	Anabas_testudineus
ENSAMEG00000017205	USB1	83	69.469	ENSAPLG00000002756	USB1	100	69.912	Anas_platyrhynchos
ENSAMEG00000017205	USB1	84	62.009	ENSACAG00000015481	USB1	100	62.009	Anolis_carolinensis
ENSAMEG00000017205	USB1	100	81.413	ENSANAG00000035640	USB1	100	82.528	Aotus_nancymaae
ENSAMEG00000017205	USB1	83	54.464	ENSACLG00000020586	usb1	99	48.929	Astatotilapia_calliptera
ENSAMEG00000017205	USB1	84	52.000	ENSAMXG00000040146	usb1	75	52.000	Astyanax_mexicanus
ENSAMEG00000017205	USB1	100	84.387	ENSBTAG00000015758	USB1	100	84.015	Bos_taurus
ENSAMEG00000017205	USB1	100	84.015	ENSCJAG00000011733	USB1	100	84.387	Callithrix_jacchus
ENSAMEG00000017205	USB1	99	88.971	ENSCAFG00000008556	USB1	73	89.706	Canis_familiaris
ENSAMEG00000017205	USB1	99	88.060	ENSCAFG00020009263	USB1	99	85.921	Canis_lupus_dingo
ENSAMEG00000017205	USB1	100	82.900	ENSCHIG00000024290	USB1	100	82.528	Capra_hircus
ENSAMEG00000017205	USB1	100	85.874	ENSTSYG00000006997	USB1	100	86.245	Carlito_syrichta
ENSAMEG00000017205	USB1	86	70.690	ENSCAPG00000009057	USB1	100	70.690	Cavia_aperea
ENSAMEG00000017205	USB1	100	82.900	ENSCPOG00000014325	USB1	100	81.413	Cavia_porcellus
ENSAMEG00000017205	USB1	100	82.528	ENSCCAG00000022132	USB1	100	82.900	Cebus_capucinus
ENSAMEG00000017205	USB1	100	83.271	ENSCATG00000032174	USB1	100	84.015	Cercocebus_atys
ENSAMEG00000017205	USB1	65	89.773	ENSCLAG00000007363	USB1	100	89.773	Chinchilla_lanigera
ENSAMEG00000017205	USB1	100	84.758	ENSCSAG00000004783	USB1	100	84.758	Chlorocebus_sabaeus
ENSAMEG00000017205	USB1	100	60.791	ENSCPBG00000026943	USB1	100	63.082	Chrysemys_picta_bellii
ENSAMEG00000017205	USB1	83	31.250	ENSCING00000011490	-	86	31.250	Ciona_intestinalis
ENSAMEG00000017205	USB1	81	31.718	ENSCSAVG00000000894	-	81	31.718	Ciona_savignyi
ENSAMEG00000017205	USB1	100	83.271	ENSCANG00000037135	USB1	100	83.271	Colobus_angolensis_palliatus
ENSAMEG00000017205	USB1	100	82.528	ENSCGRG00001011243	USB1	100	82.528	Cricetulus_griseus_chok1gshd
ENSAMEG00000017205	USB1	100	82.528	ENSCGRG00000013252	USB1	100	82.528	Cricetulus_griseus_crigri
ENSAMEG00000017205	USB1	98	48.175	ENSCSEG00000013881	usb1	84	50.644	Cynoglossus_semilaevis
ENSAMEG00000017205	USB1	83	48.684	ENSCVAG00000009252	usb1	97	49.123	Cyprinodon_variegatus
ENSAMEG00000017205	USB1	89	48.536	ENSDARG00000003841	usb1	95	46.565	Danio_rerio
ENSAMEG00000017205	USB1	100	79.926	ENSDORG00000001888	Usb1	100	81.041	Dipodomys_ordii
ENSAMEG00000017205	USB1	77	39.252	FBgn0037713	CG16790	79	39.252	Drosophila_melanogaster
ENSAMEG00000017205	USB1	100	69.145	ENSETEG00000019682	USB1	100	68.401	Echinops_telfairi
ENSAMEG00000017205	USB1	83	50.000	ENSEBUG00000005889	usb1	78	50.000	Eptatretus_burgeri
ENSAMEG00000017205	USB1	100	86.617	ENSEASG00005005484	USB1	100	86.617	Equus_asinus_asinus
ENSAMEG00000017205	USB1	100	86.617	ENSECAG00000019493	USB1	91	86.617	Equus_caballus
ENSAMEG00000017205	USB1	65	78.409	ENSEEUG00000000154	USB1	100	60.223	Erinaceus_europaeus
ENSAMEG00000017205	USB1	84	50.000	ENSELUG00000010974	usb1	84	50.000	Esox_lucius
ENSAMEG00000017205	USB1	100	89.591	ENSFCAG00000002693	USB1	100	89.963	Felis_catus
ENSAMEG00000017205	USB1	100	61.338	ENSFALG00000006876	USB1	99	61.338	Ficedula_albicollis
ENSAMEG00000017205	USB1	100	83.643	ENSFDAG00000010052	USB1	100	82.900	Fukomys_damarensis
ENSAMEG00000017205	USB1	80	50.439	ENSFHEG00000012334	usb1	74	53.763	Fundulus_heteroclitus
ENSAMEG00000017205	USB1	83	51.570	ENSGMOG00000004228	usb1	99	51.570	Gadus_morhua
ENSAMEG00000017205	USB1	83	66.964	ENSGALG00000035604	USB1	100	62.593	Gallus_gallus
ENSAMEG00000017205	USB1	98	49.091	ENSGAFG00000021890	usb1	84	51.709	Gambusia_affinis
ENSAMEG00000017205	USB1	97	46.154	ENSGACG00000003257	usb1	99	47.464	Gasterosteus_aculeatus
ENSAMEG00000017205	USB1	100	62.681	ENSGAGG00000022572	USB1	100	61.538	Gopherus_agassizii
ENSAMEG00000017205	USB1	100	82.528	ENSGGOG00000017147	USB1	100	83.643	Gorilla_gorilla
ENSAMEG00000017205	USB1	84	54.626	ENSHBUG00000009823	usb1	99	50.179	Haplochromis_burtoni
ENSAMEG00000017205	USB1	100	82.900	ENSHGLG00000016078	USB1	98	82.156	Heterocephalus_glaber_female
ENSAMEG00000017205	USB1	100	82.900	ENSHGLG00100005562	USB1	98	82.156	Heterocephalus_glaber_male
ENSAMEG00000017205	USB1	81	53.917	ENSHCOG00000015633	usb1	99	49.442	Hippocampus_comes
ENSAMEG00000017205	USB1	98	47.222	ENSIPUG00000008601	usb1	78	54.018	Ictalurus_punctatus
ENSAMEG00000017205	USB1	100	84.982	ENSSTOG00000007548	USB1	100	85.348	Ictidomys_tridecemlineatus
ENSAMEG00000017205	USB1	100	85.130	ENSJJAG00000021859	Usb1	100	84.758	Jaculus_jaculus
ENSAMEG00000017205	USB1	84	52.863	ENSKMAG00000007200	usb1	80	52.863	Kryptolebias_marmoratus
ENSAMEG00000017205	USB1	74	53.266	ENSLBEG00000008452	usb1	64	53.927	Labrus_bergylta
ENSAMEG00000017205	USB1	94	51.880	ENSLACG00000000105	USB1	72	61.722	Latimeria_chalumnae
ENSAMEG00000017205	USB1	94	53.571	ENSLOCG00000000465	usb1	87	54.694	Lepisosteus_oculatus
ENSAMEG00000017205	USB1	100	64.444	ENSLAFG00000002267	USB1	100	64.815	Loxodonta_africana
ENSAMEG00000017205	USB1	100	84.387	ENSMFAG00000003926	USB1	100	84.387	Macaca_fascicularis
ENSAMEG00000017205	USB1	100	84.387	ENSMMUG00000022669	USB1	100	84.387	Macaca_mulatta
ENSAMEG00000017205	USB1	100	84.015	ENSMNEG00000042487	USB1	100	84.015	Macaca_nemestrina
ENSAMEG00000017205	USB1	100	84.387	ENSMLEG00000028756	USB1	100	84.387	Mandrillus_leucophaeus
ENSAMEG00000017205	USB1	98	49.640	ENSMAMG00000015092	usb1	99	48.375	Mastacembelus_armatus
ENSAMEG00000017205	USB1	83	54.464	ENSMZEG00005010008	usb1	99	50.179	Maylandia_zebra
ENSAMEG00000017205	USB1	100	81.413	ENSMAUG00000007832	Usb1	100	81.413	Mesocricetus_auratus
ENSAMEG00000017205	USB1	100	83.271	ENSMICG00000004900	USB1	100	85.130	Microcebus_murinus
ENSAMEG00000017205	USB1	100	81.784	ENSMOCG00000022647	Usb1	100	81.784	Microtus_ochrogaster
ENSAMEG00000017205	USB1	85	52.193	ENSMMOG00000000490	usb1	88	52.193	Mola_mola
ENSAMEG00000017205	USB1	100	65.556	ENSMODG00000014067	USB1	100	63.082	Monodelphis_domestica
ENSAMEG00000017205	USB1	89	51.230	ENSMALG00000005930	usb1	99	48.399	Monopterus_albus
ENSAMEG00000017205	USB1	100	79.182	MGP_CAROLIEiJ_G0031421	Usb1	100	79.182	Mus_caroli
ENSAMEG00000017205	USB1	100	79.554	ENSMUSG00000031792	Usb1	100	79.646	Mus_musculus
ENSAMEG00000017205	USB1	100	80.669	MGP_PahariEiJ_G0023019	Usb1	100	82.051	Mus_pahari
ENSAMEG00000017205	USB1	100	78.810	MGP_SPRETEiJ_G0032540	Usb1	100	78.810	Mus_spretus
ENSAMEG00000017205	USB1	100	93.309	ENSMPUG00000004684	USB1	96	93.309	Mustela_putorius_furo
ENSAMEG00000017205	USB1	86	89.177	ENSMLUG00000007400	USB1	100	89.177	Myotis_lucifugus
ENSAMEG00000017205	USB1	100	84.015	ENSNGAG00000009703	Usb1	100	84.015	Nannospalax_galili
ENSAMEG00000017205	USB1	87	48.498	ENSNBRG00000008747	usb1	99	53.271	Neolamprologus_brichardi
ENSAMEG00000017205	USB1	94	82.677	ENSNLEG00000003340	USB1	100	83.071	Nomascus_leucogenys
ENSAMEG00000017205	USB1	57	58.333	ENSMEUG00000003328	-	100	61.538	Notamacropus_eugenii
ENSAMEG00000017205	USB1	62	87.879	ENSOPRG00000011803	USB1	72	87.879	Ochotona_princeps
ENSAMEG00000017205	USB1	100	80.669	ENSODEG00000016214	USB1	100	80.669	Octodon_degus
ENSAMEG00000017205	USB1	98	50.179	ENSONIG00000011063	usb1	81	54.185	Oreochromis_niloticus
ENSAMEG00000017205	USB1	83	72.000	ENSOANG00000012118	USB1	94	72.000	Ornithorhynchus_anatinus
ENSAMEG00000017205	USB1	83	50.446	ENSORLG00000012479	usb1	82	50.446	Oryzias_latipes
ENSAMEG00000017205	USB1	83	50.446	ENSORLG00020018671	usb1	82	50.446	Oryzias_latipes_hni
ENSAMEG00000017205	USB1	83	50.446	ENSORLG00015009679	usb1	83	50.446	Oryzias_latipes_hsok
ENSAMEG00000017205	USB1	83	51.339	ENSOMEG00000012930	usb1	99	47.273	Oryzias_melastigma
ENSAMEG00000017205	USB1	100	76.208	ENSOGAG00000003273	USB1	100	77.323	Otolemur_garnettii
ENSAMEG00000017205	USB1	92	84.615	ENSOARG00000001107	USB1	92	85.833	Ovis_aries
ENSAMEG00000017205	USB1	100	82.156	ENSPPAG00000042137	USB1	100	83.271	Pan_paniscus
ENSAMEG00000017205	USB1	100	88.848	ENSPPRG00000024797	USB1	100	88.476	Panthera_pardus
ENSAMEG00000017205	USB1	100	88.848	ENSPTIG00000007506	USB1	100	88.476	Panthera_tigris_altaica
ENSAMEG00000017205	USB1	100	75.465	ENSPTRG00000008172	USB1	100	87.383	Pan_troglodytes
ENSAMEG00000017205	USB1	100	84.387	ENSPANG00000025138	USB1	100	84.387	Papio_anubis
ENSAMEG00000017205	USB1	96	49.807	ENSPKIG00000015109	usb1	80	52.321	Paramormyrops_kingsleyae
ENSAMEG00000017205	USB1	83	53.333	ENSPSIG00000004305	USB1	100	53.333	Pelodiscus_sinensis
ENSAMEG00000017205	USB1	84	51.111	ENSPMGG00000017725	usb1	86	51.111	Periophthalmus_magnuspinnatus
ENSAMEG00000017205	USB1	100	80.882	ENSPEMG00000016183	Usb1	100	79.044	Peromyscus_maniculatus_bairdii
ENSAMEG00000017205	USB1	83	51.770	ENSPMAG00000000462	usb1	95	51.770	Petromyzon_marinus
ENSAMEG00000017205	USB1	98	49.638	ENSPFOG00000011130	usb1	84	52.137	Poecilia_formosa
ENSAMEG00000017205	USB1	98	48.913	ENSPLAG00000009820	usb1	84	51.282	Poecilia_latipinna
ENSAMEG00000017205	USB1	98	49.638	ENSPMEG00000006402	usb1	84	52.137	Poecilia_mexicana
ENSAMEG00000017205	USB1	86	50.000	ENSPREG00000001047	usb1	81	53.500	Poecilia_reticulata
ENSAMEG00000017205	USB1	95	79.297	ENSPPYG00000007401	USB1	100	79.688	Pongo_abelii
ENSAMEG00000017205	USB1	100	86.245	ENSPCOG00000022612	USB1	100	86.245	Propithecus_coquereli
ENSAMEG00000017205	USB1	100	81.784	ENSPVAG00000004613	USB1	100	81.041	Pteropus_vampyrus
ENSAMEG00000017205	USB1	98	50.538	ENSPNYG00000022262	usb1	99	50.538	Pundamilia_nyererei
ENSAMEG00000017205	USB1	89	50.628	ENSPNAG00000011736	usb1	81	50.628	Pygocentrus_nattereri
ENSAMEG00000017205	USB1	100	81.413	ENSRNOG00000013216	Usb1	100	81.413	Rattus_norvegicus
ENSAMEG00000017205	USB1	100	78.067	ENSRBIG00000044466	USB1	100	88.785	Rhinopithecus_bieti
ENSAMEG00000017205	USB1	100	84.387	ENSRROG00000029211	USB1	100	84.387	Rhinopithecus_roxellana
ENSAMEG00000017205	USB1	100	82.156	ENSSBOG00000029362	USB1	100	82.528	Saimiri_boliviensis_boliviensis
ENSAMEG00000017205	USB1	81	71.689	ENSSHAG00000006993	USB1	94	70.168	Sarcophilus_harrisii
ENSAMEG00000017205	USB1	84	57.709	ENSSFOG00015023663	usb1	71	57.709	Scleropages_formosus
ENSAMEG00000017205	USB1	96	47.292	ENSSMAG00000015834	usb1	99	46.939	Scophthalmus_maximus
ENSAMEG00000017205	USB1	84	55.310	ENSSDUG00000002949	usb1	99	50.362	Seriola_dumerili
ENSAMEG00000017205	USB1	83	55.357	ENSSLDG00000014174	usb1	80	55.357	Seriola_lalandi_dorsalis
ENSAMEG00000017205	USB1	80	65.888	ENSSPUG00000006741	USB1	100	65.888	Sphenodon_punctatus
ENSAMEG00000017205	USB1	98	47.719	ENSSPAG00000007484	usb1	82	51.931	Stegastes_partitus
ENSAMEG00000017205	USB1	100	86.245	ENSSSCG00000002807	USB1	100	86.245	Sus_scrofa
ENSAMEG00000017205	USB1	78	66.507	ENSTGUG00000004792	USB1	99	59.108	Taeniopygia_guttata
ENSAMEG00000017205	USB1	98	48.134	ENSTRUG00000021069	usb1	99	48.134	Takifugu_rubripes
ENSAMEG00000017205	USB1	98	48.106	ENSTNIG00000000626	usb1	98	46.970	Tetraodon_nigroviridis
ENSAMEG00000017205	USB1	86	58.190	ENSTBEG00000001507	USB1	100	58.190	Tupaia_belangeri
ENSAMEG00000017205	USB1	100	97.770	ENSUAMG00000016823	USB1	100	97.770	Ursus_americanus
ENSAMEG00000017205	USB1	80	97.664	ENSUMAG00000021369	USB1	100	97.664	Ursus_maritimus
ENSAMEG00000017205	USB1	77	61.353	ENSVPAG00000009834	-	59	89.167	Vicugna_pacos
ENSAMEG00000017205	USB1	99	92.537	ENSVVUG00000023700	USB1	89	94.372	Vulpes_vulpes
ENSAMEG00000017205	USB1	81	56.422	ENSXETG00000013795	usb1	89	56.502	Xenopus_tropicalis
ENSAMEG00000017205	USB1	84	52.632	ENSXMAG00000024687	usb1	67	52.632	Xiphophorus_maculatus