EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000017298 (Gene tree)
Gene ID: 100474169
Gene Symbol: CNOT1
Alias: AD-005|CDC39|KIAA1007|NOT1|NOT1H
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 77703 bases
Position: chrGL192338.1:4250621-4328323
Accession: 100474169
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000018307	Not1	PF04054.15	7.3e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000019048	CNOT1-201	7116	XM_002912277	ENSAMEP00000018307	2371 (aa)	XP_002912323	G1MG25

Gene Model

Click here to download ENSAMEG00000017298's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000017298's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000017298	CNOT1	100	99.747	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSAMEG00000017298	CNOT1	97	96.914	ENSAPOG00000005042	cnot1	100	96.914	Acanthochromis_polyacanthus
ENSAMEG00000017298	CNOT1	90	90.238	ENSACIG00000016003	cnot1	100	90.518	Amphilophus_citrinellus
ENSAMEG00000017298	CNOT1	100	90.787	ENSAPEG00000022342	cnot1	100	90.703	Amphiprion_percula
ENSAMEG00000017298	CNOT1	97	97.055	ENSATEG00000012892	cnot1	100	97.055	Anabas_testudineus
ENSAMEG00000017298	CNOT1	100	97.479	ENSAPLG00000007162	CNOT1	100	97.479	Anas_platyrhynchos
ENSAMEG00000017298	CNOT1	91	96.011	ENSACAG00000001602	CNOT1	98	96.011	Anolis_carolinensis
ENSAMEG00000017298	CNOT1	100	96.607	ENSANAG00000038198	CNOT1	100	96.607	Aotus_nancymaae
ENSAMEG00000017298	CNOT1	97	97.055	ENSACLG00000014234	cnot1	100	97.055	Astatotilapia_calliptera
ENSAMEG00000017298	CNOT1	100	91.105	ENSAMXG00000013170	cnot1	100	91.656	Astyanax_mexicanus
ENSAMEG00000017298	CNOT1	100	99.579	ENSBTAG00000020782	CNOT1	100	99.579	Bos_taurus
ENSAMEG00000017298	CNOT1	81	40.629	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSAMEG00000017298	CNOT1	100	99.453	ENSCJAG00000011318	CNOT1	100	99.453	Callithrix_jacchus
ENSAMEG00000017298	CNOT1	100	99.244	ENSCAFG00000008426	CNOT1	100	99.244	Canis_familiaris
ENSAMEG00000017298	CNOT1	100	98.491	ENSCAFG00020010156	CNOT1	100	99.088	Canis_lupus_dingo
ENSAMEG00000017298	CNOT1	100	99.579	ENSCHIG00000010452	CNOT1	100	99.579	Capra_hircus
ENSAMEG00000017298	CNOT1	100	99.621	ENSTSYG00000006888	CNOT1	100	99.621	Carlito_syrichta
ENSAMEG00000017298	CNOT1	100	94.823	ENSCPOG00000013026	CNOT1	100	94.823	Cavia_porcellus
ENSAMEG00000017298	CNOT1	100	97.896	ENSCCAG00000026333	CNOT1	100	97.896	Cebus_capucinus
ENSAMEG00000017298	CNOT1	100	99.537	ENSCATG00000032625	CNOT1	100	99.537	Cercocebus_atys
ENSAMEG00000017298	CNOT1	100	99.495	ENSCLAG00000006289	CNOT1	100	99.495	Chinchilla_lanigera
ENSAMEG00000017298	CNOT1	100	99.537	ENSCSAG00000004731	CNOT1	100	99.537	Chlorocebus_sabaeus
ENSAMEG00000017298	CNOT1	81	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
ENSAMEG00000017298	CNOT1	95	98.611	ENSCPBG00000026222	CNOT1	99	98.611	Chrysemys_picta_bellii
ENSAMEG00000017298	CNOT1	100	59.061	ENSCING00000009149	-	100	58.658	Ciona_intestinalis
ENSAMEG00000017298	CNOT1	89	63.219	ENSCSAVG00000002414	-	95	78.808	Ciona_savignyi
ENSAMEG00000017298	CNOT1	100	97.409	ENSCANG00000040534	CNOT1	100	97.409	Colobus_angolensis_palliatus
ENSAMEG00000017298	CNOT1	100	99.158	ENSCGRG00001016365	Cnot1	100	99.158	Cricetulus_griseus_chok1gshd
ENSAMEG00000017298	CNOT1	100	99.158	ENSCGRG00000001714	Cnot1	100	99.158	Cricetulus_griseus_crigri
ENSAMEG00000017298	CNOT1	100	83.368	ENSCVAG00000018930	cnot1	100	83.201	Cyprinodon_variegatus
ENSAMEG00000017298	CNOT1	100	90.130	ENSDARG00000004174	cnot1	100	90.088	Danio_rerio
ENSAMEG00000017298	CNOT1	100	97.013	ENSDNOG00000013250	CNOT1	100	97.013	Dasypus_novemcinctus
ENSAMEG00000017298	CNOT1	99	46.111	FBgn0085436	Not1	99	48.431	Drosophila_melanogaster
ENSAMEG00000017298	CNOT1	84	97.590	ENSETEG00000012806	CNOT1	84	97.590	Echinops_telfairi
ENSAMEG00000017298	CNOT1	81	77.136	ENSEBUG00000011534	cnot1	95	77.136	Eptatretus_burgeri
ENSAMEG00000017298	CNOT1	97	99.259	ENSEASG00005005819	CNOT1	100	98.802	Equus_asinus_asinus
ENSAMEG00000017298	CNOT1	100	99.621	ENSECAG00000009889	CNOT1	100	99.621	Equus_caballus
ENSAMEG00000017298	CNOT1	89	99.060	ENSEEUG00000006015	CNOT1	90	99.060	Erinaceus_europaeus
ENSAMEG00000017298	CNOT1	100	90.046	ENSELUG00000014085	cnot1	100	89.727	Esox_lucius
ENSAMEG00000017298	CNOT1	100	99.413	ENSFCAG00000025155	CNOT1	100	99.413	Felis_catus
ENSAMEG00000017298	CNOT1	100	97.517	ENSFALG00000007285	CNOT1	100	97.517	Ficedula_albicollis
ENSAMEG00000017298	CNOT1	100	99.411	ENSFDAG00000013399	CNOT1	100	99.411	Fukomys_damarensis
ENSAMEG00000017298	CNOT1	100	90.214	ENSFHEG00000020574	cnot1	100	90.172	Fundulus_heteroclitus
ENSAMEG00000017298	CNOT1	91	89.703	ENSGMOG00000012864	cnot1	100	90.074	Gadus_morhua
ENSAMEG00000017298	CNOT1	100	97.559	ENSGALG00000002301	CNOT1	100	97.559	Gallus_gallus
ENSAMEG00000017298	CNOT1	100	89.398	ENSGAFG00000015005	cnot1	100	89.398	Gambusia_affinis
ENSAMEG00000017298	CNOT1	91	90.496	ENSGACG00000002606	cnot1	100	95.752	Gasterosteus_aculeatus
ENSAMEG00000017298	CNOT1	100	97.644	ENSGAGG00000022646	CNOT1	100	97.644	Gopherus_agassizii
ENSAMEG00000017298	CNOT1	100	99.453	ENSGGOG00000009547	CNOT1	100	99.453	Gorilla_gorilla
ENSAMEG00000017298	CNOT1	97	97.055	ENSHBUG00000001729	cnot1	100	97.055	Haplochromis_burtoni
ENSAMEG00000017298	CNOT1	100	99.327	ENSHGLG00000014322	CNOT1	100	99.327	Heterocephalus_glaber_female
ENSAMEG00000017298	CNOT1	100	89.652	ENSHCOG00000006501	cnot1	100	89.791	Hippocampus_comes
ENSAMEG00000017298	CNOT1	100	89.113	ENSIPUG00000011915	cnot1	100	89.575	Ictalurus_punctatus
ENSAMEG00000017298	CNOT1	100	99.411	ENSSTOG00000005490	CNOT1	100	99.411	Ictidomys_tridecemlineatus
ENSAMEG00000017298	CNOT1	100	98.822	ENSJJAG00000000633	Cnot1	100	98.822	Jaculus_jaculus
ENSAMEG00000017298	CNOT1	100	90.528	ENSKMAG00000006149	cnot1	100	90.364	Kryptolebias_marmoratus
ENSAMEG00000017298	CNOT1	95	96.407	ENSLBEG00000004740	cnot1	100	96.407	Labrus_bergylta
ENSAMEG00000017298	CNOT1	100	94.781	ENSLACG00000010869	CNOT1	100	94.781	Latimeria_chalumnae
ENSAMEG00000017298	CNOT1	100	93.274	ENSLOCG00000006324	cnot1	100	93.274	Lepisosteus_oculatus
ENSAMEG00000017298	CNOT1	100	99.453	ENSLAFG00000000098	CNOT1	100	99.453	Loxodonta_africana
ENSAMEG00000017298	CNOT1	100	99.789	ENSMFAG00000035888	CNOT1	100	99.789	Macaca_fascicularis
ENSAMEG00000017298	CNOT1	100	99.495	ENSMMUG00000014625	CNOT1	100	99.495	Macaca_mulatta
ENSAMEG00000017298	CNOT1	100	96.727	ENSMNEG00000031820	CNOT1	100	99.533	Macaca_nemestrina
ENSAMEG00000017298	CNOT1	100	98.106	ENSMLEG00000040933	CNOT1	100	98.106	Mandrillus_leucophaeus
ENSAMEG00000017298	CNOT1	100	89.403	ENSMAMG00000016524	cnot1	100	89.440	Mastacembelus_armatus
ENSAMEG00000017298	CNOT1	97	97.055	ENSMZEG00005016210	cnot1	100	97.055	Maylandia_zebra
ENSAMEG00000017298	CNOT1	100	97.807	ENSMGAG00000001908	CNOT1	100	97.807	Meleagris_gallopavo
ENSAMEG00000017298	CNOT1	100	99.411	ENSMICG00000007071	CNOT1	100	99.411	Microcebus_murinus
ENSAMEG00000017298	CNOT1	100	99.285	ENSMOCG00000017969	Cnot1	100	99.285	Microtus_ochrogaster
ENSAMEG00000017298	CNOT1	97	93.689	ENSMMOG00000019134	cnot1	100	93.689	Mola_mola
ENSAMEG00000017298	CNOT1	100	97.770	ENSMODG00000014199	CNOT1	100	97.770	Monodelphis_domestica
ENSAMEG00000017298	CNOT1	100	90.488	ENSMALG00000008645	cnot1	100	90.488	Monopterus_albus
ENSAMEG00000017298	CNOT1	95	99.777	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.777	Mus_caroli
ENSAMEG00000017298	CNOT1	100	99.410	ENSMUSG00000036550	Cnot1	100	99.410	Mus_musculus
ENSAMEG00000017298	CNOT1	100	99.200	MGP_PahariEiJ_G0023028	Cnot1	100	99.200	Mus_pahari
ENSAMEG00000017298	CNOT1	100	99.242	MGP_SPRETEiJ_G0032549	Cnot1	100	99.242	Mus_spretus
ENSAMEG00000017298	CNOT1	100	99.705	ENSMPUG00000004830	CNOT1	100	99.705	Mustela_putorius_furo
ENSAMEG00000017298	CNOT1	100	98.948	ENSMLUG00000003728	CNOT1	100	98.948	Myotis_lucifugus
ENSAMEG00000017298	CNOT1	100	99.453	ENSNGAG00000018628	Cnot1	100	99.453	Nannospalax_galili
ENSAMEG00000017298	CNOT1	94	97.055	ENSNBRG00000019358	cnot1	100	97.055	Neolamprologus_brichardi
ENSAMEG00000017298	CNOT1	100	99.411	ENSNLEG00000003566	CNOT1	100	99.411	Nomascus_leucogenys
ENSAMEG00000017298	CNOT1	86	98.658	ENSMEUG00000006145	CNOT1	87	98.658	Notamacropus_eugenii
ENSAMEG00000017298	CNOT1	86	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSAMEG00000017298	CNOT1	100	99.369	ENSODEG00000016337	CNOT1	100	99.369	Octodon_degus
ENSAMEG00000017298	CNOT1	100	90.852	ENSONIG00000007358	cnot1	100	90.444	Oreochromis_niloticus
ENSAMEG00000017298	CNOT1	91	98.416	ENSOANG00000012109	CNOT1	100	98.166	Ornithorhynchus_anatinus
ENSAMEG00000017298	CNOT1	100	99.537	ENSOCUG00000006911	CNOT1	100	99.537	Oryctolagus_cuniculus
ENSAMEG00000017298	CNOT1	100	90.630	ENSORLG00000013734	cnot1	100	90.668	Oryzias_latipes
ENSAMEG00000017298	CNOT1	100	89.141	ENSORLG00020017012	cnot1	100	88.819	Oryzias_latipes_hni
ENSAMEG00000017298	CNOT1	100	89.057	ENSORLG00015007091	cnot1	100	88.567	Oryzias_latipes_hsok
ENSAMEG00000017298	CNOT1	100	88.394	ENSOMEG00000015124	cnot1	100	88.683	Oryzias_melastigma
ENSAMEG00000017298	CNOT1	100	99.453	ENSOGAG00000000543	CNOT1	100	99.453	Otolemur_garnettii
ENSAMEG00000017298	CNOT1	100	99.579	ENSOARG00000001567	CNOT1	100	99.579	Ovis_aries
ENSAMEG00000017298	CNOT1	100	99.495	ENSPPAG00000022013	CNOT1	100	99.495	Pan_paniscus
ENSAMEG00000017298	CNOT1	100	99.705	ENSPPRG00000004867	CNOT1	100	99.705	Panthera_pardus
ENSAMEG00000017298	CNOT1	100	99.705	ENSPTIG00000012589	CNOT1	100	99.705	Panthera_tigris_altaica
ENSAMEG00000017298	CNOT1	100	99.203	ENSPTRG00000008183	CNOT1	100	99.203	Pan_troglodytes
ENSAMEG00000017298	CNOT1	100	95.977	ENSPANG00000020901	CNOT1	100	95.977	Papio_anubis
ENSAMEG00000017298	CNOT1	100	92.389	ENSPKIG00000023538	CNOT1	100	92.557	Paramormyrops_kingsleyae
ENSAMEG00000017298	CNOT1	97	93.258	ENSPKIG00000002914	CNOT1	99	93.258	Paramormyrops_kingsleyae
ENSAMEG00000017298	CNOT1	100	97.517	ENSPSIG00000005499	CNOT1	100	97.517	Pelodiscus_sinensis
ENSAMEG00000017298	CNOT1	100	81.337	ENSPMAG00000009381	cnot1	100	81.237	Petromyzon_marinus
ENSAMEG00000017298	CNOT1	100	97.115	ENSPCIG00000007343	CNOT1	100	98.611	Phascolarctos_cinereus
ENSAMEG00000017298	CNOT1	99	90.042	ENSPFOG00000003497	cnot1	100	90.127	Poecilia_formosa
ENSAMEG00000017298	CNOT1	95	96.008	ENSPLAG00000014018	cnot1	100	96.008	Poecilia_latipinna
ENSAMEG00000017298	CNOT1	95	96.008	ENSPMEG00000005868	cnot1	100	96.008	Poecilia_mexicana
ENSAMEG00000017298	CNOT1	95	96.008	ENSPREG00000018793	cnot1	100	96.008	Poecilia_reticulata
ENSAMEG00000017298	CNOT1	100	99.453	ENSPPYG00000007410	CNOT1	100	99.453	Pongo_abelii
ENSAMEG00000017298	CNOT1	90	97.359	ENSPCAG00000003241	CNOT1	90	97.359	Procavia_capensis
ENSAMEG00000017298	CNOT1	100	99.161	ENSPCOG00000027139	CNOT1	100	99.161	Propithecus_coquereli
ENSAMEG00000017298	CNOT1	100	96.970	ENSPVAG00000004243	CNOT1	100	96.970	Pteropus_vampyrus
ENSAMEG00000017298	CNOT1	97	97.055	ENSPNYG00000012919	cnot1	100	97.055	Pundamilia_nyererei
ENSAMEG00000017298	CNOT1	100	90.135	ENSPNAG00000000246	cnot1	100	90.556	Pygocentrus_nattereri
ENSAMEG00000017298	CNOT1	100	99.158	ENSRNOG00000012271	Cnot1	100	99.158	Rattus_norvegicus
ENSAMEG00000017298	CNOT1	100	97.188	ENSRBIG00000044598	CNOT1	100	97.188	Rhinopithecus_bieti
ENSAMEG00000017298	CNOT1	100	99.537	ENSRROG00000000906	CNOT1	100	99.537	Rhinopithecus_roxellana
ENSAMEG00000017298	CNOT1	57	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSAMEG00000017298	CNOT1	100	95.061	ENSSBOG00000029155	CNOT1	100	95.061	Saimiri_boliviensis_boliviensis
ENSAMEG00000017298	CNOT1	100	97.939	ENSSHAG00000012187	CNOT1	100	97.939	Sarcophilus_harrisii
ENSAMEG00000017298	CNOT1	100	90.882	ENSSFOG00015017614	cnot1	100	90.626	Scleropages_formosus
ENSAMEG00000017298	CNOT1	97	97.055	ENSSMAG00000013844	cnot1	100	97.055	Scophthalmus_maximus
ENSAMEG00000017298	CNOT1	97	96.914	ENSSDUG00000021491	cnot1	100	96.914	Seriola_dumerili
ENSAMEG00000017298	CNOT1	97	96.914	ENSSLDG00000014816	cnot1	100	96.914	Seriola_lalandi_dorsalis
ENSAMEG00000017298	CNOT1	84	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSAMEG00000017298	CNOT1	100	90.875	ENSSPAG00000018802	cnot1	100	90.622	Stegastes_partitus
ENSAMEG00000017298	CNOT1	100	99.453	ENSSSCG00000002799	CNOT1	100	99.453	Sus_scrofa
ENSAMEG00000017298	CNOT1	100	97.394	ENSTGUG00000005919	CNOT1	100	97.394	Taeniopygia_guttata
ENSAMEG00000017298	CNOT1	100	89.256	ENSTNIG00000018706	cnot1	100	89.102	Tetraodon_nigroviridis
ENSAMEG00000017298	CNOT1	80	100.000	ENSTBEG00000000720	CNOT1	80	100.000	Tupaia_belangeri
ENSAMEG00000017298	CNOT1	95	99.184	ENSTTRG00000008460	CNOT1	95	99.184	Tursiops_truncatus
ENSAMEG00000017298	CNOT1	100	99.705	ENSUAMG00000009251	CNOT1	100	99.705	Ursus_americanus
ENSAMEG00000017298	CNOT1	100	99.705	ENSUMAG00000021291	CNOT1	100	99.705	Ursus_maritimus
ENSAMEG00000017298	CNOT1	97	97.027	ENSVPAG00000008846	CNOT1	97	97.027	Vicugna_pacos
ENSAMEG00000017298	CNOT1	100	98.491	ENSVVUG00000024037	CNOT1	100	99.088	Vulpes_vulpes
ENSAMEG00000017298	CNOT1	100	90.492	ENSXETG00000015900	cnot1	100	90.282	Xenopus_tropicalis
ENSAMEG00000017298	CNOT1	100	89.567	ENSXCOG00000013552	cnot1	100	89.567	Xiphophorus_couchianus
ENSAMEG00000017298	CNOT1	100	89.609	ENSXMAG00000006031	cnot1	100	89.609	Xiphophorus_maculatus