EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000017349 (Gene tree)
Gene ID: 100478295
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 17165 bases
Position: chrGL192412.1:930102-947266
Accession: 21368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000018327	zf-U11-48K	PF05253.12	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000019068	SNRNP48-201	1038	-	ENSAMEP00000018327	346 (aa)	-	G1MG45

Gene Model

Click here to download ENSAMEG00000017349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000017349's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000017349	SNRNP48	100	88.761	ENSG00000168566	SNRNP48	99	89.914	Homo_sapiens
ENSAMEG00000017349	SNRNP48	82	47.405	ENSAPOG00000021430	snrnp48	96	44.857	Acanthochromis_polyacanthus
ENSAMEG00000017349	SNRNP48	83	46.713	ENSACIG00000002032	snrnp48	96	43.605	Amphilophus_citrinellus
ENSAMEG00000017349	SNRNP48	82	47.887	ENSAOCG00000010562	snrnp48	96	44.638	Amphiprion_ocellaris
ENSAMEG00000017349	SNRNP48	82	47.387	ENSAPEG00000003231	snrnp48	96	44.253	Amphiprion_percula
ENSAMEG00000017349	SNRNP48	78	50.554	ENSATEG00000020210	snrnp48	80	50.542	Anabas_testudineus
ENSAMEG00000017349	SNRNP48	84	64.384	ENSACAG00000002811	SNRNP48	90	64.384	Anolis_carolinensis
ENSAMEG00000017349	SNRNP48	100	87.608	ENSANAG00000033538	SNRNP48	99	88.761	Aotus_nancymaae
ENSAMEG00000017349	SNRNP48	91	45.597	ENSAMXG00000015309	snrnp48	97	44.253	Astyanax_mexicanus
ENSAMEG00000017349	SNRNP48	100	84.770	ENSBTAG00000001123	SNRNP48	99	85.345	Bos_taurus
ENSAMEG00000017349	SNRNP48	100	87.896	ENSCJAG00000021330	SNRNP48	99	89.049	Callithrix_jacchus
ENSAMEG00000017349	SNRNP48	99	92.733	ENSCAFG00000009574	SNRNP48	83	92.754	Canis_familiaris
ENSAMEG00000017349	SNRNP48	99	93.043	ENSCAFG00020013203	SNRNP48	99	93.043	Canis_lupus_dingo
ENSAMEG00000017349	SNRNP48	100	86.207	ENSCHIG00000015216	SNRNP48	99	86.782	Capra_hircus
ENSAMEG00000017349	SNRNP48	100	86.744	ENSTSYG00000000698	SNRNP48	99	87.320	Carlito_syrichta
ENSAMEG00000017349	SNRNP48	91	82.911	ENSCAPG00000006768	SNRNP48	99	82.911	Cavia_aperea
ENSAMEG00000017349	SNRNP48	100	84.438	ENSCPOG00000007910	SNRNP48	99	85.303	Cavia_porcellus
ENSAMEG00000017349	SNRNP48	100	86.455	ENSCCAG00000035652	SNRNP48	99	87.608	Cebus_capucinus
ENSAMEG00000017349	SNRNP48	100	87.896	ENSCATG00000033947	SNRNP48	99	89.049	Cercocebus_atys
ENSAMEG00000017349	SNRNP48	100	84.726	ENSCLAG00000003765	SNRNP48	99	85.591	Chinchilla_lanigera
ENSAMEG00000017349	SNRNP48	100	89.337	ENSCSAG00000007409	SNRNP48	99	89.337	Chlorocebus_sabaeus
ENSAMEG00000017349	SNRNP48	86	64.145	ENSCPBG00000019146	SNRNP48	92	64.145	Chrysemys_picta_bellii
ENSAMEG00000017349	SNRNP48	100	88.184	ENSCANG00000030017	SNRNP48	99	89.337	Colobus_angolensis_palliatus
ENSAMEG00000017349	SNRNP48	99	66.860	ENSCGRG00001008805	-	95	66.279	Cricetulus_griseus_chok1gshd
ENSAMEG00000017349	SNRNP48	100	85.014	ENSCGRG00001001076	-	99	84.726	Cricetulus_griseus_chok1gshd
ENSAMEG00000017349	SNRNP48	100	85.014	ENSCGRG00000007781	Snrnp48	99	84.726	Cricetulus_griseus_crigri
ENSAMEG00000017349	SNRNP48	74	48.837	ENSCSEG00000000722	snrnp48	71	48.837	Cynoglossus_semilaevis
ENSAMEG00000017349	SNRNP48	90	44.904	ENSCVAG00000019829	snrnp48	79	44.904	Cyprinodon_variegatus
ENSAMEG00000017349	SNRNP48	82	45.486	ENSDARG00000039989	snrnp48	87	46.104	Danio_rerio
ENSAMEG00000017349	SNRNP48	100	87.644	ENSDNOG00000014978	SNRNP48	99	87.644	Dasypus_novemcinctus
ENSAMEG00000017349	SNRNP48	100	85.632	ENSDORG00000015140	Snrnp48	99	86.310	Dipodomys_ordii
ENSAMEG00000017349	SNRNP48	100	91.354	ENSEASG00005012021	SNRNP48	99	91.354	Equus_asinus_asinus
ENSAMEG00000017349	SNRNP48	100	91.931	ENSECAG00000026937	SNRNP48	99	91.931	Equus_caballus
ENSAMEG00000017349	SNRNP48	100	67.816	ENSEEUG00000015437	SNRNP48	99	67.529	Erinaceus_europaeus
ENSAMEG00000017349	SNRNP48	88	46.926	ENSELUG00000009766	snrnp48	83	47.213	Esox_lucius
ENSAMEG00000017349	SNRNP48	100	93.372	ENSFCAG00000018853	SNRNP48	99	93.372	Felis_catus
ENSAMEG00000017349	SNRNP48	84	63.014	ENSFALG00000007797	SNRNP48	93	63.014	Ficedula_albicollis
ENSAMEG00000017349	SNRNP48	100	85.591	ENSFDAG00000009231	SNRNP48	99	85.591	Fukomys_damarensis
ENSAMEG00000017349	SNRNP48	58	53.960	ENSFHEG00000014647	snrnp48	97	46.918	Fundulus_heteroclitus
ENSAMEG00000017349	SNRNP48	71	47.368	ENSGMOG00000018599	-	87	45.614	Gadus_morhua
ENSAMEG00000017349	SNRNP48	83	63.574	ENSGALG00000013005	SNRNP48	89	66.418	Gallus_gallus
ENSAMEG00000017349	SNRNP48	71	49.206	ENSGAFG00000021639	snrnp48	93	44.970	Gambusia_affinis
ENSAMEG00000017349	SNRNP48	69	50.622	ENSGACG00000017756	-	96	44.152	Gasterosteus_aculeatus
ENSAMEG00000017349	SNRNP48	85	63.907	ENSGAGG00000000865	SNRNP48	97	63.907	Gopherus_agassizii
ENSAMEG00000017349	SNRNP48	100	88.761	ENSGGOG00000013220	SNRNP48	99	89.914	Gorilla_gorilla
ENSAMEG00000017349	SNRNP48	73	48.235	ENSHBUG00000017066	snrnp48	95	42.529	Haplochromis_burtoni
ENSAMEG00000017349	SNRNP48	100	86.455	ENSHGLG00000015241	SNRNP48	99	86.455	Heterocephalus_glaber_female
ENSAMEG00000017349	SNRNP48	100	86.455	ENSHGLG00100010027	SNRNP48	99	86.455	Heterocephalus_glaber_male
ENSAMEG00000017349	SNRNP48	72	46.000	ENSHCOG00000014066	snrnp48	94	41.159	Hippocampus_comes
ENSAMEG00000017349	SNRNP48	100	89.625	ENSSTOG00000014635	SNRNP48	99	90.533	Ictidomys_tridecemlineatus
ENSAMEG00000017349	SNRNP48	100	83.573	ENSJJAG00000011495	Snrnp48	99	83.573	Jaculus_jaculus
ENSAMEG00000017349	SNRNP48	72	47.200	ENSKMAG00000016514	snrnp48	73	47.451	Kryptolebias_marmoratus
ENSAMEG00000017349	SNRNP48	74	49.225	ENSLBEG00000026249	snrnp48	95	44.058	Labrus_bergylta
ENSAMEG00000017349	SNRNP48	96	52.507	ENSLACG00000003958	SNRNP48	98	51.906	Latimeria_chalumnae
ENSAMEG00000017349	SNRNP48	84	49.147	ENSLOCG00000004187	snrnp48	95	47.214	Lepisosteus_oculatus
ENSAMEG00000017349	SNRNP48	100	82.997	ENSLAFG00000011152	SNRNP48	99	84.150	Loxodonta_africana
ENSAMEG00000017349	SNRNP48	100	88.473	ENSMFAG00000045216	SNRNP48	99	89.625	Macaca_fascicularis
ENSAMEG00000017349	SNRNP48	100	88.473	ENSMMUG00000014785	SNRNP48	99	89.625	Macaca_mulatta
ENSAMEG00000017349	SNRNP48	100	88.184	ENSMNEG00000042269	SNRNP48	99	89.337	Macaca_nemestrina
ENSAMEG00000017349	SNRNP48	100	88.473	ENSMLEG00000034004	SNRNP48	99	89.625	Mandrillus_leucophaeus
ENSAMEG00000017349	SNRNP48	74	47.104	ENSMAMG00000018673	snrnp48	83	43.988	Mastacembelus_armatus
ENSAMEG00000017349	SNRNP48	84	64.286	ENSMGAG00000006037	SNRNP48	99	64.286	Meleagris_gallopavo
ENSAMEG00000017349	SNRNP48	100	85.879	ENSMAUG00000011944	Snrnp48	99	86.264	Mesocricetus_auratus
ENSAMEG00000017349	SNRNP48	100	86.167	ENSMICG00000012497	SNRNP48	99	87.320	Microcebus_murinus
ENSAMEG00000017349	SNRNP48	100	85.303	ENSMOCG00000015555	Snrnp48	99	85.014	Microtus_ochrogaster
ENSAMEG00000017349	SNRNP48	53	52.432	ENSMMOG00000003072	-	58	52.432	Mola_mola
ENSAMEG00000017349	SNRNP48	99	72.093	ENSMODG00000009996	SNRNP48	93	72.093	Monodelphis_domestica
ENSAMEG00000017349	SNRNP48	73	51.383	ENSMALG00000005725	snrnp48	95	45.930	Monopterus_albus
ENSAMEG00000017349	SNRNP48	100	84.726	MGP_CAROLIEiJ_G0018441	Snrnp48	99	84.726	Mus_caroli
ENSAMEG00000017349	SNRNP48	100	84.438	ENSMUSG00000021431	Snrnp48	99	84.438	Mus_musculus
ENSAMEG00000017349	SNRNP48	100	84.438	MGP_PahariEiJ_G0019509	Snrnp48	99	84.438	Mus_pahari
ENSAMEG00000017349	SNRNP48	100	83.862	MGP_SPRETEiJ_G0019321	Snrnp48	99	83.862	Mus_spretus
ENSAMEG00000017349	SNRNP48	100	83.573	ENSNGAG00000004849	Snrnp48	99	83.573	Nannospalax_galili
ENSAMEG00000017349	SNRNP48	73	47.843	ENSNBRG00000012127	snrnp48	95	42.120	Neolamprologus_brichardi
ENSAMEG00000017349	SNRNP48	100	89.049	ENSNLEG00000011667	SNRNP48	99	90.202	Nomascus_leucogenys
ENSAMEG00000017349	SNRNP48	96	77.039	ENSOPRG00000015471	SNRNP48	100	77.644	Ochotona_princeps
ENSAMEG00000017349	SNRNP48	97	42.151	ENSONIG00000001520	snrnp48	95	43.391	Oreochromis_niloticus
ENSAMEG00000017349	SNRNP48	55	63.942	ENSOANG00000019888	-	100	64.423	Ornithorhynchus_anatinus
ENSAMEG00000017349	SNRNP48	85	85.424	ENSOCUG00000005168	SNRNP48	100	86.262	Oryctolagus_cuniculus
ENSAMEG00000017349	SNRNP48	89	47.742	ENSORLG00000015654	snrnp48	96	46.243	Oryzias_latipes
ENSAMEG00000017349	SNRNP48	89	47.097	ENSORLG00020015976	snrnp48	82	45.665	Oryzias_latipes_hni
ENSAMEG00000017349	SNRNP48	89	47.742	ENSORLG00015022379	snrnp48	82	46.243	Oryzias_latipes_hsok
ENSAMEG00000017349	SNRNP48	84	47.279	ENSOMEG00000022007	snrnp48	95	45.058	Oryzias_melastigma
ENSAMEG00000017349	SNRNP48	92	87.500	ENSOGAG00000005275	SNRNP48	96	87.423	Otolemur_garnettii
ENSAMEG00000017349	SNRNP48	85	86.102	ENSOARG00000017319	SNRNP48	99	86.102	Ovis_aries
ENSAMEG00000017349	SNRNP48	100	89.049	ENSPPAG00000032873	SNRNP48	99	90.202	Pan_paniscus
ENSAMEG00000017349	SNRNP48	100	92.795	ENSPPRG00000004283	SNRNP48	99	92.795	Panthera_pardus
ENSAMEG00000017349	SNRNP48	85	92.881	ENSPTIG00000013502	SNRNP48	99	92.881	Panthera_tigris_altaica
ENSAMEG00000017349	SNRNP48	100	89.049	ENSPTRG00000017703	SNRNP48	99	90.202	Pan_troglodytes
ENSAMEG00000017349	SNRNP48	100	88.473	ENSPANG00000000771	SNRNP48	99	89.625	Papio_anubis
ENSAMEG00000017349	SNRNP48	95	45.536	ENSPKIG00000013703	snrnp48	61	48.980	Paramormyrops_kingsleyae
ENSAMEG00000017349	SNRNP48	89	61.199	ENSPSIG00000002213	SNRNP48	94	61.967	Pelodiscus_sinensis
ENSAMEG00000017349	SNRNP48	70	48.387	ENSPMGG00000008120	snrnp48	86	48.387	Periophthalmus_magnuspinnatus
ENSAMEG00000017349	SNRNP48	100	85.879	ENSPEMG00000008872	Snrnp48	99	86.517	Peromyscus_maniculatus_bairdii
ENSAMEG00000017349	SNRNP48	71	50.607	ENSPFOG00000003578	snrnp48	92	43.844	Poecilia_formosa
ENSAMEG00000017349	SNRNP48	64	49.778	ENSPLAG00000002290	snrnp48	76	49.778	Poecilia_latipinna
ENSAMEG00000017349	SNRNP48	71	49.798	ENSPMEG00000018033	snrnp48	92	43.243	Poecilia_mexicana
ENSAMEG00000017349	SNRNP48	69	50.000	ENSPREG00000018541	snrnp48	93	44.214	Poecilia_reticulata
ENSAMEG00000017349	SNRNP48	100	87.608	ENSPPYG00000016209	SNRNP48	99	88.761	Pongo_abelii
ENSAMEG00000017349	SNRNP48	77	69.288	ENSPCAG00000011991	SNRNP48	99	70.787	Procavia_capensis
ENSAMEG00000017349	SNRNP48	100	87.032	ENSPVAG00000002854	SNRNP48	99	88.184	Pteropus_vampyrus
ENSAMEG00000017349	SNRNP48	74	48.077	ENSPNYG00000015399	snrnp48	90	46.552	Pundamilia_nyererei
ENSAMEG00000017349	SNRNP48	100	85.303	ENSRNOG00000013756	Snrnp48	99	85.303	Rattus_norvegicus
ENSAMEG00000017349	SNRNP48	92	87.774	ENSRBIG00000043856	SNRNP48	97	89.457	Rhinopithecus_bieti
ENSAMEG00000017349	SNRNP48	100	88.184	ENSRROG00000043229	SNRNP48	99	89.337	Rhinopithecus_roxellana
ENSAMEG00000017349	SNRNP48	100	87.608	ENSSBOG00000019486	SNRNP48	99	88.761	Saimiri_boliviensis_boliviensis
ENSAMEG00000017349	SNRNP48	98	71.221	ENSSHAG00000014483	SNRNP48	99	71.221	Sarcophilus_harrisii
ENSAMEG00000017349	SNRNP48	72	49.802	ENSSFOG00015006610	snrnp48	74	47.205	Scleropages_formosus
ENSAMEG00000017349	SNRNP48	80	48.561	ENSSDUG00000014953	snrnp48	92	45.045	Seriola_dumerili
ENSAMEG00000017349	SNRNP48	79	48.375	ENSSLDG00000005989	snrnp48	92	45.482	Seriola_lalandi_dorsalis
ENSAMEG00000017349	SNRNP48	98	58.430	ENSSPUG00000006257	SNRNP48	95	58.430	Sphenodon_punctatus
ENSAMEG00000017349	SNRNP48	78	47.653	ENSSPAG00000006454	snrnp48	92	44.083	Stegastes_partitus
ENSAMEG00000017349	SNRNP48	84	61.616	ENSTGUG00000007575	SNRNP48	93	61.616	Taeniopygia_guttata
ENSAMEG00000017349	SNRNP48	69	52.066	ENSTRUG00000007031	snrnp48	74	51.575	Takifugu_rubripes
ENSAMEG00000017349	SNRNP48	73	46.850	ENSTNIG00000012977	-	75	46.850	Tetraodon_nigroviridis
ENSAMEG00000017349	SNRNP48	76	90.943	ENSTBEG00000015620	SNRNP48	78	90.943	Tupaia_belangeri
ENSAMEG00000017349	SNRNP48	100	86.744	ENSTTRG00000016715	SNRNP48	99	87.608	Tursiops_truncatus
ENSAMEG00000017349	SNRNP48	100	96.243	ENSUAMG00000003690	SNRNP48	99	98.810	Ursus_americanus
ENSAMEG00000017349	SNRNP48	85	85.763	ENSVPAG00000003557	SNRNP48	99	85.763	Vicugna_pacos
ENSAMEG00000017349	SNRNP48	99	93.043	ENSVVUG00000004996	SNRNP48	99	93.043	Vulpes_vulpes
ENSAMEG00000017349	SNRNP48	90	53.355	ENSXETG00000020447	snrnp48	99	50.425	Xenopus_tropicalis
ENSAMEG00000017349	SNRNP48	65	49.558	ENSXCOG00000004478	snrnp48	68	49.558	Xiphophorus_couchianus
ENSAMEG00000017349	SNRNP48	71	50.202	ENSXMAG00000013595	snrnp48	93	44.214	Xiphophorus_maculatus