EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000017516 (Gene tree)
Gene ID: 100474235
Gene Symbol: MRPS28
Alias: HSPC007|MRP-S28|MRPS35
Full Name: 28S ribosomal protein S28%2C mitochondrial
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 82875 bases
Position: chrGL193697.1:3504-86378
Accession: 100474235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000018499	MRP-S35	PF10246.9	1.3e-52	1	1
ENSAMEP00000018500	MRP-S35	PF10246.9	5.5e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000019243	MRPS28-202	204	-	ENSAMEP00000018500	68 (aa)	-	G1MGL6
ENSAMET00000019242	MRPS28-201	345	-	ENSAMEP00000018499	115 (aa)	XP_002927895	D2HYE7

Gene Model

Click here to download ENSAMEG00000017516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000017516's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000017516	MRPS28	100	89.565	ENSG00000147586	MRPS28	99	92.157	Homo_sapiens
ENSAMEG00000017516	MRPS28	79	65.934	ENSAPOG00000007350	mrps28	77	65.934	Acanthochromis_polyacanthus
ENSAMEG00000017516	MRPS28	91	64.762	ENSACIG00000007839	mrps28	60	64.762	Amphilophus_citrinellus
ENSAMEG00000017516	MRPS28	96	66.364	ENSAOCG00000000705	mrps28	63	66.364	Amphiprion_ocellaris
ENSAMEG00000017516	MRPS28	96	66.364	ENSAPEG00000016051	mrps28	63	66.364	Amphiprion_percula
ENSAMEG00000017516	MRPS28	90	70.192	ENSATEG00000015295	mrps28	57	70.192	Anabas_testudineus
ENSAMEG00000017516	MRPS28	91	83.810	ENSAPLG00000005666	MRPS28	98	83.810	Anas_platyrhynchos
ENSAMEG00000017516	MRPS28	90	60.952	ENSACLG00000003892	mrps28	90	60.952	Astatotilapia_calliptera
ENSAMEG00000017516	MRPS28	96	72.727	ENSAMXG00000026324	mrps28	59	72.727	Astyanax_mexicanus
ENSAMEG00000017516	MRPS28	100	89.565	ENSBTAG00000001302	MRPS28	61	89.565	Bos_taurus
ENSAMEG00000017516	MRPS28	88	43.333	WBGene00012830	mrps-28	54	49.462	Caenorhabditis_elegans
ENSAMEG00000017516	MRPS28	95	92.661	ENSCAFG00000008393	MRPS28	60	93.519	Canis_familiaris
ENSAMEG00000017516	MRPS28	95	92.661	ENSCAFG00020017987	MRPS28	60	93.519	Canis_lupus_dingo
ENSAMEG00000017516	MRPS28	100	90.435	ENSCHIG00000018727	MRPS28	61	90.435	Capra_hircus
ENSAMEG00000017516	MRPS28	99	78.947	ENSTSYG00000031343	-	64	78.947	Carlito_syrichta
ENSAMEG00000017516	MRPS28	90	83.654	ENSCAPG00000006948	-	94	83.654	Cavia_aperea
ENSAMEG00000017516	MRPS28	90	84.615	ENSCPOG00000031885	-	94	84.615	Cavia_porcellus
ENSAMEG00000017516	MRPS28	100	88.696	ENSCCAG00000022534	MRPS28	80	88.660	Cebus_capucinus
ENSAMEG00000017516	MRPS28	82	88.298	ENSCLAG00000003227	-	95	84.615	Chinchilla_lanigera
ENSAMEG00000017516	MRPS28	100	88.696	ENSCHOG00000004885	MRPS28	64	88.696	Choloepus_hoffmanni
ENSAMEG00000017516	MRPS28	94	78.704	ENSCPBG00000007206	MRPS28	54	78.704	Chrysemys_picta_bellii
ENSAMEG00000017516	MRPS28	97	86.607	ENSCGRG00001018741	Mrps28	60	86.607	Cricetulus_griseus_chok1gshd
ENSAMEG00000017516	MRPS28	97	84.821	ENSCGRG00000018208	Mrps28	97	84.821	Cricetulus_griseus_crigri
ENSAMEG00000017516	MRPS28	90	65.049	ENSCSEG00000020947	mrps28	97	65.049	Cynoglossus_semilaevis
ENSAMEG00000017516	MRPS28	94	51.852	ENSCVAG00000007159	mrps28	88	51.852	Cyprinodon_variegatus
ENSAMEG00000017516	MRPS28	90	69.231	ENSDARG00000041538	mrps28	59	69.231	Danio_rerio
ENSAMEG00000017516	MRPS28	97	84.821	ENSDORG00000002762	Mrps28	61	84.821	Dipodomys_ordii
ENSAMEG00000017516	MRPS28	92	51.887	FBgn0034361	mRpS28	55	51.887	Drosophila_melanogaster
ENSAMEG00000017516	MRPS28	84	73.196	ENSEBUG00000010846	mrps28	57	73.196	Eptatretus_burgeri
ENSAMEG00000017516	MRPS28	97	92.857	ENSEASG00005020574	MRPS28	60	92.857	Equus_asinus_asinus
ENSAMEG00000017516	MRPS28	97	93.750	ENSECAG00000015430	MRPS28	60	93.750	Equus_caballus
ENSAMEG00000017516	MRPS28	94	53.704	ENSEEUG00000013471	MRPS28	60	53.704	Erinaceus_europaeus
ENSAMEG00000017516	MRPS28	100	93.913	ENSFCAG00000032510	MRPS28	61	93.913	Felis_catus
ENSAMEG00000017516	MRPS28	94	80.556	ENSFALG00000008608	MRPS28	82	80.556	Ficedula_albicollis
ENSAMEG00000017516	MRPS28	99	80.702	ENSFDAG00000013634	MRPS28	60	80.702	Fukomys_damarensis
ENSAMEG00000017516	MRPS28	94	54.630	ENSFHEG00000006233	mrps28	81	54.630	Fundulus_heteroclitus
ENSAMEG00000017516	MRPS28	95	54.128	ENSGAFG00000014759	mrps28	56	54.128	Gambusia_affinis
ENSAMEG00000017516	MRPS28	93	67.290	ENSGACG00000019939	mrps28	57	67.290	Gasterosteus_aculeatus
ENSAMEG00000017516	MRPS28	94	77.778	ENSGAGG00000025904	MRPS28	63	77.778	Gopherus_agassizii
ENSAMEG00000017516	MRPS28	90	61.538	ENSHBUG00000014315	mrps28	88	61.538	Haplochromis_burtoni
ENSAMEG00000017516	MRPS28	81	63.830	ENSHCOG00000011561	mrps28	53	63.830	Hippocampus_comes
ENSAMEG00000017516	MRPS28	95	71.560	ENSIPUG00000012566	mrps28	59	71.560	Ictalurus_punctatus
ENSAMEG00000017516	MRPS28	91	70.476	ENSKMAG00000006636	mrps28	57	70.093	Kryptolebias_marmoratus
ENSAMEG00000017516	MRPS28	93	73.832	ENSLACG00000014702	MRPS28	59	72.727	Latimeria_chalumnae
ENSAMEG00000017516	MRPS28	91	76.190	ENSLOCG00000017359	mrps28	55	76.190	Lepisosteus_oculatus
ENSAMEG00000017516	MRPS28	79	79.630	ENSMAMG00000017782	mrps28	83	73.958	Mastacembelus_armatus
ENSAMEG00000017516	MRPS28	90	60.952	ENSMZEG00005010529	-	90	60.952	Maylandia_zebra
ENSAMEG00000017516	MRPS28	90	60.952	ENSMZEG00005014997	mrps28	90	60.952	Maylandia_zebra
ENSAMEG00000017516	MRPS28	90	81.731	ENSMGAG00000011622	MRPS28	100	81.731	Meleagris_gallopavo
ENSAMEG00000017516	MRPS28	97	87.500	ENSMAUG00000009465	Mrps28	60	87.500	Mesocricetus_auratus
ENSAMEG00000017516	MRPS28	99	89.474	ENSMICG00000044873	MRPS28	62	89.474	Microcebus_murinus
ENSAMEG00000017516	MRPS28	97	85.714	ENSMOCG00000021930	Mrps28	60	85.714	Microtus_ochrogaster
ENSAMEG00000017516	MRPS28	96	80.909	ENSMODG00000006621	MRPS28	59	80.909	Monodelphis_domestica
ENSAMEG00000017516	MRPS28	93	71.963	ENSMALG00000006494	mrps28	81	71.963	Monopterus_albus
ENSAMEG00000017516	MRPS28	97	83.929	MGP_CAROLIEiJ_G0024833	Mrps28	60	83.929	Mus_caroli
ENSAMEG00000017516	MRPS28	97	83.036	ENSMUSG00000040269	Mrps28	60	83.036	Mus_musculus
ENSAMEG00000017516	MRPS28	97	83.036	MGP_PahariEiJ_G0026281	Mrps28	60	83.036	Mus_pahari
ENSAMEG00000017516	MRPS28	97	83.036	MGP_SPRETEiJ_G0025763	Mrps28	60	83.036	Mus_spretus
ENSAMEG00000017516	MRPS28	100	94.783	ENSMPUG00000001853	MRPS28	61	94.783	Mustela_putorius_furo
ENSAMEG00000017516	MRPS28	100	84.348	ENSMLUG00000015175	MRPS28	61	84.348	Myotis_lucifugus
ENSAMEG00000017516	MRPS28	97	82.143	ENSNGAG00000000216	Mrps28	60	82.143	Nannospalax_galili
ENSAMEG00000017516	MRPS28	86	65.000	ENSNBRG00000021393	mrps28	57	65.000	Neolamprologus_brichardi
ENSAMEG00000017516	MRPS28	97	79.279	ENSMEUG00000007676	MRPS28	61	79.279	Notamacropus_eugenii
ENSAMEG00000017516	MRPS28	97	84.821	ENSODEG00000005701	MRPS28	60	84.821	Octodon_degus
ENSAMEG00000017516	MRPS28	90	62.857	ENSONIG00000020758	mrps28	60	62.857	Oreochromis_niloticus
ENSAMEG00000017516	MRPS28	98	89.381	ENSOCUG00000000867	MRPS28	65	89.381	Oryctolagus_cuniculus
ENSAMEG00000017516	MRPS28	91	62.857	ENSORLG00000026843	mrps28	59	62.857	Oryzias_latipes
ENSAMEG00000017516	MRPS28	91	63.810	ENSORLG00020022089	mrps28	59	63.810	Oryzias_latipes_hni
ENSAMEG00000017516	MRPS28	90	57.692	ENSOMEG00000008250	mrps28	59	57.692	Oryzias_melastigma
ENSAMEG00000017516	MRPS28	99	86.842	ENSOGAG00000016599	MRPS28	61	86.842	Otolemur_garnettii
ENSAMEG00000017516	MRPS28	100	94.783	ENSPPRG00000009220	MRPS28	61	94.783	Panthera_pardus
ENSAMEG00000017516	MRPS28	100	93.913	ENSPTIG00000019934	MRPS28	61	93.913	Panthera_tigris_altaica
ENSAMEG00000017516	MRPS28	95	71.560	ENSPKIG00000022304	mrps28	87	71.560	Paramormyrops_kingsleyae
ENSAMEG00000017516	MRPS28	91	60.000	ENSPMGG00000008007	-	58	60.000	Periophthalmus_magnuspinnatus
ENSAMEG00000017516	MRPS28	97	83.929	ENSPEMG00000012338	Mrps28	60	83.929	Peromyscus_maniculatus_bairdii
ENSAMEG00000017516	MRPS28	89	74.510	ENSPMAG00000002015	mrps28	91	74.510	Petromyzon_marinus
ENSAMEG00000017516	MRPS28	96	80.000	ENSPCIG00000026795	MRPS28	59	80.000	Phascolarctos_cinereus
ENSAMEG00000017516	MRPS28	96	55.856	ENSPFOG00000020828	mrps28	64	53.448	Poecilia_formosa
ENSAMEG00000017516	MRPS28	96	55.856	ENSPLAG00000005387	mrps28	64	53.448	Poecilia_latipinna
ENSAMEG00000017516	MRPS28	87	59.406	ENSPMEG00000022332	mrps28	58	59.406	Poecilia_mexicana
ENSAMEG00000017516	MRPS28	100	53.448	ENSPREG00000005690	mrps28	64	53.448	Poecilia_reticulata
ENSAMEG00000017516	MRPS28	100	86.087	ENSPPYG00000018694	MRPS28	64	86.087	Pongo_abelii
ENSAMEG00000017516	MRPS28	100	86.087	ENSPCAG00000000404	MRPS28	99	86.087	Procavia_capensis
ENSAMEG00000017516	MRPS28	99	90.351	ENSPCOG00000003866	MRPS28	62	90.351	Propithecus_coquereli
ENSAMEG00000017516	MRPS28	99	88.596	ENSPVAG00000007815	MRPS28	63	88.596	Pteropus_vampyrus
ENSAMEG00000017516	MRPS28	90	60.952	ENSPNYG00000016499	mrps28	90	60.952	Pundamilia_nyererei
ENSAMEG00000017516	MRPS28	96	71.818	ENSPNAG00000018621	mrps28	59	71.818	Pygocentrus_nattereri
ENSAMEG00000017516	MRPS28	93	90.476	ENSRNOG00000032630	Mrps28	59	85.586	Rattus_norvegicus
ENSAMEG00000017516	MRPS28	100	88.696	ENSSBOG00000028198	MRPS28	80	89.796	Saimiri_boliviensis_boliviensis
ENSAMEG00000017516	MRPS28	94	71.296	ENSSFOG00015004723	mrps28	53	71.296	Scleropages_formosus
ENSAMEG00000017516	MRPS28	90	66.019	ENSSMAG00000021042	mrps28	55	72.340	Scophthalmus_maximus
ENSAMEG00000017516	MRPS28	86	70.707	ENSSDUG00000021722	mrps28	55	70.707	Seriola_dumerili
ENSAMEG00000017516	MRPS28	83	72.632	ENSSLDG00000013261	mrps28	55	69.608	Seriola_lalandi_dorsalis
ENSAMEG00000017516	MRPS28	100	84.348	ENSSARG00000007429	MRPS28	61	84.348	Sorex_araneus
ENSAMEG00000017516	MRPS28	94	73.148	ENSSPUG00000017502	MRPS28	64	73.148	Sphenodon_punctatus
ENSAMEG00000017516	MRPS28	91	62.857	ENSSPAG00000003194	mrps28	60	62.857	Stegastes_partitus
ENSAMEG00000017516	MRPS28	100	87.826	ENSSSCG00000037782	MRPS28	61	87.826	Sus_scrofa
ENSAMEG00000017516	MRPS28	81	69.892	ENSTRUG00000012758	mrps28	51	69.892	Takifugu_rubripes
ENSAMEG00000017516	MRPS28	99	84.211	ENSTBEG00000010380	MRPS28	63	84.211	Tupaia_belangeri
ENSAMEG00000017516	MRPS28	100	88.696	ENSTTRG00000000087	MRPS28	64	88.696	Tursiops_truncatus
ENSAMEG00000017516	MRPS28	100	96.522	ENSUAMG00000018127	MRPS28	61	96.522	Ursus_americanus
ENSAMEG00000017516	MRPS28	100	96.522	ENSUMAG00000014927	MRPS28	61	96.522	Ursus_maritimus
ENSAMEG00000017516	MRPS28	100	89.565	ENSVPAG00000000652	MRPS28	64	89.565	Vicugna_pacos
ENSAMEG00000017516	MRPS28	95	92.661	ENSVVUG00000000384	MRPS28	60	93.519	Vulpes_vulpes