EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000017656 (Gene tree)
Gene ID: 100482613
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 126312 bases
Position: chrGL193088.1:234717-361028
Accession: 14957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000018672	PUF	PF00806.19	5.5e-71	1	8
ENSAMEP00000018672	PUF	PF00806.19	5.5e-71	2	8
ENSAMEP00000018672	PUF	PF00806.19	5.5e-71	3	8
ENSAMEP00000018672	PUF	PF00806.19	5.5e-71	4	8
ENSAMEP00000018672	PUF	PF00806.19	5.5e-71	5	8
ENSAMEP00000018672	PUF	PF00806.19	5.5e-71	6	8
ENSAMEP00000018672	PUF	PF00806.19	5.5e-71	7	8
ENSAMEP00000018672	PUF	PF00806.19	5.5e-71	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000019419	PUM1-201	3681	-	ENSAMEP00000018672	1226 (aa)	-	G1MH38

Gene Model

Click here to download ENSAMEG00000017656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000017656's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000017656	PUM1	87	77.016	ENSAMEG00000002823	PUM2	100	77.108

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000017656	PUM1	100	98.940	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSAMEG00000017656	PUM1	87	91.566	ENSAPOG00000021632	pum1	100	91.084	Acanthochromis_polyacanthus
ENSAMEG00000017656	PUM1	97	74.606	ENSACIG00000021013	pum1	100	76.446	Amphilophus_citrinellus
ENSAMEG00000017656	PUM1	87	91.566	ENSAOCG00000003944	pum1	100	91.084	Amphiprion_ocellaris
ENSAMEG00000017656	PUM1	87	91.566	ENSAPEG00000014550	pum1	100	91.084	Amphiprion_percula
ENSAMEG00000017656	PUM1	87	91.566	ENSATEG00000016004	pum1	100	91.084	Anabas_testudineus
ENSAMEG00000017656	PUM1	97	97.647	ENSAPLG00000009351	PUM1	100	97.647	Anas_platyrhynchos
ENSAMEG00000017656	PUM1	97	95.638	ENSACAG00000000682	PUM1	98	95.638	Anolis_carolinensis
ENSAMEG00000017656	PUM1	97	99.160	ENSANAG00000027865	PUM1	100	100.000	Aotus_nancymaae
ENSAMEG00000017656	PUM1	87	76.596	ENSACLG00000019354	pum1	100	78.855	Astatotilapia_calliptera
ENSAMEG00000017656	PUM1	97	78.369	ENSAMXG00000020607	pum1	97	78.952	Astyanax_mexicanus
ENSAMEG00000017656	PUM1	97	99.244	ENSBTAG00000018979	PUM1	100	100.000	Bos_taurus
ENSAMEG00000017656	PUM1	97	99.328	ENSCJAG00000006035	PUM1	100	100.000	Callithrix_jacchus
ENSAMEG00000017656	PUM1	97	97.647	ENSCAFG00000011205	PUM1	100	97.647	Canis_familiaris
ENSAMEG00000017656	PUM1	89	97.818	ENSCAFG00020024616	PUM1	99	99.242	Canis_lupus_dingo
ENSAMEG00000017656	PUM1	97	99.244	ENSCHIG00000012952	PUM1	100	99.517	Capra_hircus
ENSAMEG00000017656	PUM1	97	99.076	ENSTSYG00000008868	PUM1	100	99.306	Carlito_syrichta
ENSAMEG00000017656	PUM1	97	98.908	ENSCPOG00000031613	PUM1	100	99.306	Cavia_porcellus
ENSAMEG00000017656	PUM1	97	97.059	ENSCATG00000017991	PUM1	100	100.000	Cercocebus_atys
ENSAMEG00000017656	PUM1	97	98.992	ENSCLAG00000007662	PUM1	100	99.306	Chinchilla_lanigera
ENSAMEG00000017656	PUM1	97	98.501	ENSCSAG00000001028	PUM1	100	98.501	Chlorocebus_sabaeus
ENSAMEG00000017656	PUM1	91	95.989	ENSCHOG00000010245	PUM1	93	95.989	Choloepus_hoffmanni
ENSAMEG00000017656	PUM1	98	97.005	ENSCPBG00000009288	PUM1	100	98.309	Chrysemys_picta_bellii
ENSAMEG00000017656	PUM1	100	98.858	ENSCANG00000042606	PUM1	100	100.000	Colobus_angolensis_palliatus
ENSAMEG00000017656	PUM1	97	98.487	ENSCGRG00001024949	Pum1	100	99.306	Cricetulus_griseus_chok1gshd
ENSAMEG00000017656	PUM1	97	98.487	ENSCGRG00000014197	Pum1	100	99.306	Cricetulus_griseus_crigri
ENSAMEG00000017656	PUM1	87	76.226	ENSCSEG00000015981	pum1	100	77.911	Cynoglossus_semilaevis
ENSAMEG00000017656	PUM1	97	73.967	ENSCVAG00000007043	pum1	100	75.825	Cyprinodon_variegatus
ENSAMEG00000017656	PUM1	97	79.048	ENSDARG00000099256	pum1	100	79.466	Danio_rerio
ENSAMEG00000017656	PUM1	97	98.992	ENSDNOG00000010939	PUM1	100	98.992	Dasypus_novemcinctus
ENSAMEG00000017656	PUM1	81	98.792	ENSDORG00000001875	Pum1	100	98.792	Dipodomys_ordii
ENSAMEG00000017656	PUM1	88	93.939	ENSETEG00000004355	PUM1	90	93.939	Echinops_telfairi
ENSAMEG00000017656	PUM1	97	99.244	ENSEASG00005010813	PUM1	100	99.244	Equus_asinus_asinus
ENSAMEG00000017656	PUM1	97	99.244	ENSECAG00000021369	PUM1	100	99.244	Equus_caballus
ENSAMEG00000017656	PUM1	77	99.778	ENSEEUG00000003871	PUM1	77	99.778	Erinaceus_europaeus
ENSAMEG00000017656	PUM1	97	76.253	ENSELUG00000002409	pum1	100	83.457	Esox_lucius
ENSAMEG00000017656	PUM1	97	100.000	ENSFCAG00000010374	PUM1	100	100.000	Felis_catus
ENSAMEG00000017656	PUM1	99	95.226	ENSFALG00000001214	PUM1	99	94.239	Ficedula_albicollis
ENSAMEG00000017656	PUM1	97	98.908	ENSFDAG00000011319	PUM1	100	99.306	Fukomys_damarensis
ENSAMEG00000017656	PUM1	97	97.899	ENSGALG00000042598	PUM1	100	97.899	Gallus_gallus
ENSAMEG00000017656	PUM1	87	87.816	ENSGAFG00000015617	pum1	100	90.361	Gambusia_affinis
ENSAMEG00000017656	PUM1	97	74.773	ENSGACG00000005717	pum1	100	76.296	Gasterosteus_aculeatus
ENSAMEG00000017656	PUM1	97	97.479	ENSGAGG00000001290	PUM1	99	98.586	Gopherus_agassizii
ENSAMEG00000017656	PUM1	99	97.699	ENSGGOG00000011983	PUM1	100	100.000	Gorilla_gorilla
ENSAMEG00000017656	PUM1	97	74.298	ENSHBUG00000018718	pum1	100	76.238	Haplochromis_burtoni
ENSAMEG00000017656	PUM1	97	98.739	ENSHGLG00000013819	Pum1	100	98.739	Heterocephalus_glaber_female
ENSAMEG00000017656	PUM1	97	98.739	ENSHGLG00100008621	Pum1	100	98.739	Heterocephalus_glaber_male
ENSAMEG00000017656	PUM1	87	75.139	ENSHCOG00000005149	pum1	100	75.254	Hippocampus_comes
ENSAMEG00000017656	PUM1	97	77.140	ENSIPUG00000020421	pum1	100	78.008	Ictalurus_punctatus
ENSAMEG00000017656	PUM1	97	99.244	ENSSTOG00000010757	PUM1	100	100.000	Ictidomys_tridecemlineatus
ENSAMEG00000017656	PUM1	97	98.824	ENSJJAG00000000530	Pum1	100	100.000	Jaculus_jaculus
ENSAMEG00000017656	PUM1	97	73.967	ENSKMAG00000003481	pum1	100	75.825	Kryptolebias_marmoratus
ENSAMEG00000017656	PUM1	97	73.593	ENSLBEG00000002527	pum1	100	75.785	Labrus_bergylta
ENSAMEG00000017656	PUM1	97	86.567	ENSLACG00000017188	PUM1	100	86.733	Latimeria_chalumnae
ENSAMEG00000017656	PUM1	97	88.020	ENSLOCG00000005210	pum1	100	88.186	Lepisosteus_oculatus
ENSAMEG00000017656	PUM1	97	98.739	ENSLAFG00000003178	PUM1	100	98.739	Loxodonta_africana
ENSAMEG00000017656	PUM1	97	99.327	ENSMFAG00000010291	PUM1	100	100.000	Macaca_fascicularis
ENSAMEG00000017656	PUM1	97	99.079	ENSMMUG00000013520	PUM1	100	100.000	Macaca_mulatta
ENSAMEG00000017656	PUM1	97	99.328	ENSMNEG00000034639	PUM1	100	100.000	Macaca_nemestrina
ENSAMEG00000017656	PUM1	100	99.021	ENSMLEG00000038743	PUM1	100	100.000	Mandrillus_leucophaeus
ENSAMEG00000017656	PUM1	97	74.545	ENSMAMG00000011606	pum1	100	76.485	Mastacembelus_armatus
ENSAMEG00000017656	PUM1	97	74.298	ENSMZEG00005005834	pum1	100	76.238	Maylandia_zebra
ENSAMEG00000017656	PUM1	97	97.647	ENSMGAG00000000724	PUM1	100	97.647	Meleagris_gallopavo
ENSAMEG00000017656	PUM1	97	98.824	ENSMAUG00000022090	Pum1	100	99.306	Mesocricetus_auratus
ENSAMEG00000017656	PUM1	97	99.244	ENSMICG00000007713	-	100	99.306	Microcebus_murinus
ENSAMEG00000017656	PUM1	98	96.758	ENSMICG00000012213	-	100	97.691	Microcebus_murinus
ENSAMEG00000017656	PUM1	97	98.739	ENSMOCG00000015463	Pum1	100	98.739	Microtus_ochrogaster
ENSAMEG00000017656	PUM1	87	88.276	ENSMMOG00000019817	pum1	100	90.843	Mola_mola
ENSAMEG00000017656	PUM1	97	97.567	ENSMODG00000017067	PUM1	100	97.567	Monodelphis_domestica
ENSAMEG00000017656	PUM1	87	88.506	ENSMALG00000016399	pum1	100	91.084	Monopterus_albus
ENSAMEG00000017656	PUM1	97	98.487	MGP_CAROLIEiJ_G0026549	Pum1	100	98.611	Mus_caroli
ENSAMEG00000017656	PUM1	97	98.739	ENSMUSG00000028580	Pum1	100	99.306	Mus_musculus
ENSAMEG00000017656	PUM1	97	98.571	MGP_PahariEiJ_G0028881	Pum1	100	99.306	Mus_pahari
ENSAMEG00000017656	PUM1	97	98.655	MGP_SPRETEiJ_G0027529	Pum1	100	99.306	Mus_spretus
ENSAMEG00000017656	PUM1	97	99.496	ENSMPUG00000015454	PUM1	100	99.496	Mustela_putorius_furo
ENSAMEG00000017656	PUM1	97	99.160	ENSMLUG00000006490	PUM1	100	99.160	Myotis_lucifugus
ENSAMEG00000017656	PUM1	97	99.244	ENSNGAG00000002378	Pum1	100	99.244	Nannospalax_galili
ENSAMEG00000017656	PUM1	77	81.235	ENSNBRG00000010689	pum1	100	83.374	Neolamprologus_brichardi
ENSAMEG00000017656	PUM1	100	97.635	ENSNLEG00000001151	PUM1	100	99.306	Nomascus_leucogenys
ENSAMEG00000017656	PUM1	85	95.181	ENSMEUG00000000976	-	85	95.181	Notamacropus_eugenii
ENSAMEG00000017656	PUM1	81	99.065	ENSOPRG00000001776	PUM1	73	99.065	Ochotona_princeps
ENSAMEG00000017656	PUM1	97	98.739	ENSODEG00000003465	PUM1	100	98.739	Octodon_degus
ENSAMEG00000017656	PUM1	97	74.878	ENSONIG00000002290	pum1	100	76.568	Oreochromis_niloticus
ENSAMEG00000017656	PUM1	79	77.789	ENSOANG00000004902	-	100	77.789	Ornithorhynchus_anatinus
ENSAMEG00000017656	PUM1	97	98.655	ENSOCUG00000008641	PUM1	99	98.655	Oryctolagus_cuniculus
ENSAMEG00000017656	PUM1	97	74.876	ENSORLG00000011482	pum1	100	76.069	Oryzias_latipes
ENSAMEG00000017656	PUM1	97	74.959	ENSORLG00020019461	pum1	100	76.069	Oryzias_latipes_hni
ENSAMEG00000017656	PUM1	97	74.959	ENSORLG00015011375	pum1	100	76.151	Oryzias_latipes_hsok
ENSAMEG00000017656	PUM1	97	96.393	ENSOGAG00000011063	PUM1	100	96.393	Otolemur_garnettii
ENSAMEG00000017656	PUM1	97	98.655	ENSOARG00000001899	PUM1	100	99.517	Ovis_aries
ENSAMEG00000017656	PUM1	99	97.699	ENSPPAG00000044003	PUM1	100	100.000	Pan_paniscus
ENSAMEG00000017656	PUM1	100	99.511	ENSPPRG00000001370	PUM1	100	100.000	Panthera_pardus
ENSAMEG00000017656	PUM1	100	99.347	ENSPTIG00000010798	PUM1	100	100.000	Panthera_tigris_altaica
ENSAMEG00000017656	PUM1	99	97.699	ENSPTRG00000000453	PUM1	100	100.000	Pan_troglodytes
ENSAMEG00000017656	PUM1	97	99.328	ENSPANG00000016338	PUM1	100	100.000	Papio_anubis
ENSAMEG00000017656	PUM1	91	93.478	ENSPKIG00000010578	pum1	100	93.478	Paramormyrops_kingsleyae
ENSAMEG00000017656	PUM1	97	97.899	ENSPSIG00000014118	PUM1	100	97.899	Pelodiscus_sinensis
ENSAMEG00000017656	PUM1	77	79.559	ENSPMGG00000005836	pum1	100	81.807	Periophthalmus_magnuspinnatus
ENSAMEG00000017656	PUM1	97	98.908	ENSPEMG00000010009	Pum1	100	99.306	Peromyscus_maniculatus_bairdii
ENSAMEG00000017656	PUM1	97	97.651	ENSPCIG00000014151	PUM1	100	98.309	Phascolarctos_cinereus
ENSAMEG00000017656	PUM1	92	77.340	ENSPFOG00000007289	pum1	99	82.443	Poecilia_formosa
ENSAMEG00000017656	PUM1	97	73.333	ENSPLAG00000007256	pum1	100	78.180	Poecilia_latipinna
ENSAMEG00000017656	PUM1	87	77.369	ENSPMEG00000019543	pum1	99	78.329	Poecilia_mexicana
ENSAMEG00000017656	PUM1	97	74.380	ENSPREG00000005195	pum1	100	80.895	Poecilia_reticulata
ENSAMEG00000017656	PUM1	97	97.364	ENSPPYG00000001621	PUM1	100	97.364	Pongo_abelii
ENSAMEG00000017656	PUM1	77	99.691	ENSPCAG00000001979	PUM1	76	99.691	Procavia_capensis
ENSAMEG00000017656	PUM1	97	99.244	ENSPCOG00000004398	PUM1	100	99.306	Propithecus_coquereli
ENSAMEG00000017656	PUM1	99	95.993	ENSPVAG00000005207	PUM1	99	95.993	Pteropus_vampyrus
ENSAMEG00000017656	PUM1	97	74.380	ENSPNYG00000009518	pum1	100	81.446	Pundamilia_nyererei
ENSAMEG00000017656	PUM1	97	78.798	ENSPNAG00000026728	pum1	100	80.312	Pygocentrus_nattereri
ENSAMEG00000017656	PUM1	97	98.655	ENSRNOG00000011709	Pum1	100	98.655	Rattus_norvegicus
ENSAMEG00000017656	PUM1	99	97.952	ENSRBIG00000042521	PUM1	100	100.000	Rhinopithecus_bieti
ENSAMEG00000017656	PUM1	99	97.867	ENSRROG00000020156	PUM1	100	100.000	Rhinopithecus_roxellana
ENSAMEG00000017656	PUM1	97	99.412	ENSSBOG00000032037	PUM1	100	100.000	Saimiri_boliviensis_boliviensis
ENSAMEG00000017656	PUM1	97	97.483	ENSSHAG00000010918	PUM1	100	97.483	Sarcophilus_harrisii
ENSAMEG00000017656	PUM1	87	88.506	ENSSMAG00000010918	pum1	100	91.084	Scophthalmus_maximus
ENSAMEG00000017656	PUM1	97	74.380	ENSSDUG00000009021	pum1	100	76.568	Seriola_dumerili
ENSAMEG00000017656	PUM1	93	75.959	ENSSLDG00000009667	pum1	100	78.594	Seriola_lalandi_dorsalis
ENSAMEG00000017656	PUM1	94	98.210	ENSSARG00000003055	PUM1	94	98.210	Sorex_araneus
ENSAMEG00000017656	PUM1	97	97.143	ENSSPUG00000006267	PUM1	100	97.143	Sphenodon_punctatus
ENSAMEG00000017656	PUM1	87	91.566	ENSSPAG00000016636	pum1	100	91.084	Stegastes_partitus
ENSAMEG00000017656	PUM1	97	99.664	ENSSSCG00000003591	PUM1	100	100.000	Sus_scrofa
ENSAMEG00000017656	PUM1	97	74.194	ENSTRUG00000013121	pum1	100	83.005	Takifugu_rubripes
ENSAMEG00000017656	PUM1	97	74.711	ENSTNIG00000016983	pum1	100	76.733	Tetraodon_nigroviridis
ENSAMEG00000017656	PUM1	85	95.122	ENSTBEG00000013810	PUM1	89	95.122	Tupaia_belangeri
ENSAMEG00000017656	PUM1	92	99.271	ENSTTRG00000007436	PUM1	90	99.271	Tursiops_truncatus
ENSAMEG00000017656	PUM1	96	99.355	ENSUAMG00000018262	-	100	99.355	Ursus_americanus
ENSAMEG00000017656	PUM1	97	100.000	ENSUMAG00000009211	PUM1	100	100.000	Ursus_maritimus
ENSAMEG00000017656	PUM1	90	99.627	ENSVPAG00000005902	PUM1	92	99.627	Vicugna_pacos
ENSAMEG00000017656	PUM1	97	100.000	ENSVVUG00000014631	PUM1	100	99.916	Vulpes_vulpes
ENSAMEG00000017656	PUM1	97	87.542	ENSXETG00000012904	pum1	100	86.706	Xenopus_tropicalis
ENSAMEG00000017656	PUM1	97	73.636	ENSXMAG00000002945	pum1	100	77.870	Xiphophorus_maculatus