EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000017828 (Gene tree)
Gene ID: 100484930
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 10909 bases
Position: chrGL192492.1:1368553-1379461
Accession: 12950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000018833	KH_1	PF00013.29	2.1e-07	1	1
ENSAMEP00000018833	zf-CCHC	PF00098.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000019586	SF1-201	1929	-	ENSAMEP00000018833	643 (aa)	-	G1MHJ8

Gene Model

Click here to download ENSAMEG00000017828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000017828's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000017828	SF1	91	94.567	ENSANAG00000026664	-	94	99.499	Aotus_nancymaae
ENSAMEG00000017828	SF1	82	87.736	ENSANAG00000022607	-	88	88.767	Aotus_nancymaae
ENSAMEG00000017828	SF1	57	84.282	ENSACLG00000007633	sf1	61	79.562	Astatotilapia_calliptera
ENSAMEG00000017828	SF1	91	94.737	ENSBTAG00000001035	SF1	92	94.737	Bos_taurus
ENSAMEG00000017828	SF1	91	94.737	ENSCJAG00000002780	SF1	99	91.757	Callithrix_jacchus
ENSAMEG00000017828	SF1	83	99.812	ENSCAFG00000014239	SF1	99	91.757	Canis_familiaris
ENSAMEG00000017828	SF1	91	94.737	ENSCAFG00020014381	SF1	99	91.757	Canis_lupus_dingo
ENSAMEG00000017828	SF1	91	94.737	ENSCHIG00000025867	SF1	95	99.424	Capra_hircus
ENSAMEG00000017828	SF1	75	98.864	ENSCAPG00000010762	SF1	87	98.864	Cavia_aperea
ENSAMEG00000017828	SF1	82	99.811	ENSCPOG00000012290	SF1	98	98.286	Cavia_porcellus
ENSAMEG00000017828	SF1	83	85.075	ENSCCAG00000023781	-	88	87.665	Cebus_capucinus
ENSAMEG00000017828	SF1	100	91.756	ENSCCAG00000037881	SF1	94	99.749	Cebus_capucinus
ENSAMEG00000017828	SF1	100	94.216	ENSCATG00000011564	SF1	99	91.757	Cercocebus_atys
ENSAMEG00000017828	SF1	81	99.424	ENSCSAG00000007258	SF1	95	99.424	Chlorocebus_sabaeus
ENSAMEG00000017828	SF1	64	93.447	ENSCHOG00000006008	SF1	79	93.541	Choloepus_hoffmanni
ENSAMEG00000017828	SF1	81	86.486	ENSCPBG00000023763	SF1	66	85.907	Chrysemys_picta_bellii
ENSAMEG00000017828	SF1	58	58.115	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSAMEG00000017828	SF1	88	46.791	ENSCSAVG00000009055	-	56	66.667	Ciona_savignyi
ENSAMEG00000017828	SF1	91	94.737	ENSCANG00000042201	SF1	99	91.757	Colobus_angolensis_palliatus
ENSAMEG00000017828	SF1	99	93.634	ENSCGRG00001003677	Sf1	99	93.634	Cricetulus_griseus_chok1gshd
ENSAMEG00000017828	SF1	82	97.714	ENSCGRG00000001708	Sf1	97	97.714	Cricetulus_griseus_crigri
ENSAMEG00000017828	SF1	58	84.324	ENSCVAG00000001670	sf1	63	78.973	Cyprinodon_variegatus
ENSAMEG00000017828	SF1	60	81.013	ENSDARG00000008188	sf1	70	78.385	Danio_rerio
ENSAMEG00000017828	SF1	82	97.917	ENSDNOG00000001282	SF1	96	97.917	Dasypus_novemcinctus
ENSAMEG00000017828	SF1	99	95.008	ENSDORG00000016334	Sf1	99	95.476	Dipodomys_ordii
ENSAMEG00000017828	SF1	82	91.887	ENSETEG00000012830	SF1	74	90.807	Echinops_telfairi
ENSAMEG00000017828	SF1	81	99.040	ENSEASG00005018272	SF1	95	99.040	Equus_asinus_asinus
ENSAMEG00000017828	SF1	81	99.232	ENSECAG00000024544	SF1	95	99.232	Equus_caballus
ENSAMEG00000017828	SF1	61	99.237	ENSEEUG00000001058	SF1	100	99.237	Erinaceus_europaeus
ENSAMEG00000017828	SF1	57	81.432	ENSELUG00000013225	sf1	54	78.230	Esox_lucius
ENSAMEG00000017828	SF1	83	99.812	ENSFCAG00000012231	SF1	99	91.757	Felis_catus
ENSAMEG00000017828	SF1	99	88.837	ENSFDAG00000009833	SF1	99	90.938	Fukomys_damarensis
ENSAMEG00000017828	SF1	58	82.058	ENSFHEG00000022656	sf1	59	77.251	Fundulus_heteroclitus
ENSAMEG00000017828	SF1	50	87.651	ENSGMOG00000007469	sf1	60	87.651	Gadus_morhua
ENSAMEG00000017828	SF1	57	84.182	ENSGAFG00000019284	sf1	76	79.412	Gambusia_affinis
ENSAMEG00000017828	SF1	71	89.011	ENSGAGG00000021691	SF1	72	85.907	Gopherus_agassizii
ENSAMEG00000017828	SF1	83	99.812	ENSHGLG00000009541	SF1	99	91.602	Heterocephalus_glaber_female
ENSAMEG00000017828	SF1	68	88.966	ENSHGLG00100008076	-	87	86.806	Heterocephalus_glaber_male
ENSAMEG00000017828	SF1	75	98.864	ENSHGLG00100013879	-	87	98.864	Heterocephalus_glaber_male
ENSAMEG00000017828	SF1	70	86.752	ENSHGLG00100008255	-	92	86.325	Heterocephalus_glaber_male
ENSAMEG00000017828	SF1	58	80.829	ENSHCOG00000011388	sf1	58	76.755	Hippocampus_comes
ENSAMEG00000017828	SF1	90	94.710	ENSSTOG00000009790	-	100	91.406	Ictidomys_tridecemlineatus
ENSAMEG00000017828	SF1	72	96.667	ENSSTOG00000024353	-	83	96.667	Ictidomys_tridecemlineatus
ENSAMEG00000017828	SF1	91	94.567	ENSJJAG00000011788	Sf1	99	91.446	Jaculus_jaculus
ENSAMEG00000017828	SF1	58	81.937	ENSLBEG00000019836	sf1	50	86.890	Labrus_bergylta
ENSAMEG00000017828	SF1	64	79.087	ENSLACG00000018493	SF1	74	78.554	Latimeria_chalumnae
ENSAMEG00000017828	SF1	57	84.759	ENSLOCG00000002130	sf1	59	79.803	Lepisosteus_oculatus
ENSAMEG00000017828	SF1	100	94.018	ENSLAFG00000007201	SF1	100	94.574	Loxodonta_africana
ENSAMEG00000017828	SF1	100	94.753	ENSMFAG00000033122	SF1	99	91.757	Macaca_fascicularis
ENSAMEG00000017828	SF1	91	94.728	ENSMMUG00000022606	SF1	99	99.263	Macaca_mulatta
ENSAMEG00000017828	SF1	100	94.216	ENSMNEG00000037901	SF1	89	99.730	Macaca_nemestrina
ENSAMEG00000017828	SF1	99	94.046	ENSMLEG00000040706	SF1	89	99.458	Mandrillus_leucophaeus
ENSAMEG00000017828	SF1	83	99.250	ENSMAUG00000014064	Sf1	99	90.980	Mesocricetus_auratus
ENSAMEG00000017828	SF1	100	92.379	ENSMICG00000001202	SF1	94	99.500	Microcebus_murinus
ENSAMEG00000017828	SF1	83	99.062	ENSMOCG00000022038	Sf1	99	90.980	Microtus_ochrogaster
ENSAMEG00000017828	SF1	57	81.720	ENSMMOG00000020474	sf1	60	76.399	Mola_mola
ENSAMEG00000017828	SF1	70	94.631	ENSMODG00000029407	SF1	97	94.631	Monodelphis_domestica
ENSAMEG00000017828	SF1	100	91.602	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSAMEG00000017828	SF1	100	91.602	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSAMEG00000017828	SF1	100	91.291	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSAMEG00000017828	SF1	100	91.602	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSAMEG00000017828	SF1	91	94.567	ENSMPUG00000012684	SF1	92	94.567	Mustela_putorius_furo
ENSAMEG00000017828	SF1	91	94.567	ENSMLUG00000015217	-	92	94.567	Myotis_lucifugus
ENSAMEG00000017828	SF1	83	99.625	ENSNGAG00000005550	Sf1	99	91.446	Nannospalax_galili
ENSAMEG00000017828	SF1	58	83.690	ENSNBRG00000017606	sf1	60	79.562	Neolamprologus_brichardi
ENSAMEG00000017828	SF1	100	93.712	ENSNLEG00000005236	-	99	94.264	Nomascus_leucogenys
ENSAMEG00000017828	SF1	80	98.051	ENSMEUG00000013424	SF1	97	98.051	Notamacropus_eugenii
ENSAMEG00000017828	SF1	74	98.947	ENSOPRG00000005008	SF1	96	98.947	Ochotona_princeps
ENSAMEG00000017828	SF1	100	87.869	ENSODEG00000006102	-	99	87.247	Octodon_degus
ENSAMEG00000017828	SF1	63	85.222	ENSOANG00000002909	SF1	96	87.724	Ornithorhynchus_anatinus
ENSAMEG00000017828	SF1	83	100.000	ENSOCUG00000026486	SF1	100	91.913	Oryctolagus_cuniculus
ENSAMEG00000017828	SF1	59	80.563	ENSORLG00000011853	sf1	58	76.739	Oryzias_latipes
ENSAMEG00000017828	SF1	59	80.563	ENSORLG00020011834	sf1	58	76.739	Oryzias_latipes_hni
ENSAMEG00000017828	SF1	58	80.366	ENSORLG00015012855	sf1	59	76.499	Oryzias_latipes_hsok
ENSAMEG00000017828	SF1	100	92.535	ENSOGAG00000016196	SF1	99	91.757	Otolemur_garnettii
ENSAMEG00000017828	SF1	81	94.872	ENSOARG00000009166	SF1	80	99.782	Ovis_aries
ENSAMEG00000017828	SF1	100	92.049	ENSPPAG00000002799	-	95	99.749	Pan_paniscus
ENSAMEG00000017828	SF1	88	94.571	ENSPPRG00000013566	SF1	98	91.719	Panthera_pardus
ENSAMEG00000017828	SF1	69	98.871	ENSPTIG00000016141	SF1	80	98.871	Panthera_tigris_altaica
ENSAMEG00000017828	SF1	100	92.049	ENSPTRG00000003846	SF1	97	99.761	Pan_troglodytes
ENSAMEG00000017828	SF1	100	94.216	ENSPANG00000020754	SF1	95	99.424	Papio_anubis
ENSAMEG00000017828	SF1	52	78.235	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSAMEG00000017828	SF1	54	87.179	ENSPSIG00000003610	SF1	84	82.831	Pelodiscus_sinensis
ENSAMEG00000017828	SF1	83	99.250	ENSPEMG00000010463	Sf1	98	94.255	Peromyscus_maniculatus_bairdii
ENSAMEG00000017828	SF1	83	96.623	ENSPCIG00000018173	SF1	99	89.114	Phascolarctos_cinereus
ENSAMEG00000017828	SF1	58	85.445	ENSPFOG00000013683	sf1	66	80.779	Poecilia_formosa
ENSAMEG00000017828	SF1	57	83.862	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSAMEG00000017828	SF1	57	83.862	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSAMEG00000017828	SF1	57	83.333	ENSPREG00000004155	sf1	59	78.708	Poecilia_reticulata
ENSAMEG00000017828	SF1	83	99.812	ENSPPYG00000003098	-	98	99.615	Pongo_abelii
ENSAMEG00000017828	SF1	82	98.099	ENSPCAG00000013631	SF1	78	98.099	Procavia_capensis
ENSAMEG00000017828	SF1	100	92.535	ENSPCOG00000027546	SF1	94	99.500	Propithecus_coquereli
ENSAMEG00000017828	SF1	82	97.909	ENSPVAG00000016938	SF1	79	97.909	Pteropus_vampyrus
ENSAMEG00000017828	SF1	83	99.254	ENSRNOG00000021085	Sf1	91	97.380	Rattus_norvegicus
ENSAMEG00000017828	SF1	78	100.000	ENSRBIG00000042818	SF1	90	99.465	Rhinopithecus_bieti
ENSAMEG00000017828	SF1	99	89.080	ENSRROG00000045655	SF1	98	98.235	Rhinopithecus_roxellana
ENSAMEG00000017828	SF1	64	37.674	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSAMEG00000017828	SF1	83	79.291	ENSSBOG00000022267	-	97	81.373	Saimiri_boliviensis_boliviensis
ENSAMEG00000017828	SF1	62	93.548	ENSSHAG00000006841	SF1	74	94.789	Sarcophilus_harrisii
ENSAMEG00000017828	SF1	64	76.112	ENSSMAG00000007549	sf1	63	76.291	Scophthalmus_maximus
ENSAMEG00000017828	SF1	80	95.551	ENSSARG00000008180	SF1	100	95.551	Sorex_araneus
ENSAMEG00000017828	SF1	78	82.759	ENSSPUG00000012907	SF1	76	85.033	Sphenodon_punctatus
ENSAMEG00000017828	SF1	91	94.737	ENSSSCG00000013021	SF1	95	99.424	Sus_scrofa
ENSAMEG00000017828	SF1	82	62.243	ENSTNIG00000004820	sf1	78	69.451	Tetraodon_nigroviridis
ENSAMEG00000017828	SF1	71	92.358	ENSTBEG00000013133	SF1	66	92.325	Tupaia_belangeri
ENSAMEG00000017828	SF1	81	94.981	ENSTTRG00000008857	SF1	96	95.349	Tursiops_truncatus
ENSAMEG00000017828	SF1	66	96.244	ENSUAMG00000011977	SF1	82	96.270	Ursus_americanus
ENSAMEG00000017828	SF1	79	99.771	ENSUMAG00000007268	SF1	93	99.768	Ursus_maritimus
ENSAMEG00000017828	SF1	55	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSAMEG00000017828	SF1	81	99.424	ENSVVUG00000028585	SF1	95	99.424	Vulpes_vulpes
ENSAMEG00000017828	SF1	85	70.863	ENSXETG00000008434	sf1	68	81.553	Xenopus_tropicalis
ENSAMEG00000017828	SF1	57	84.932	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSAMEG00000017828	SF1	58	83.113	ENSXMAG00000007822	sf1	61	79.426	Xiphophorus_maculatus