EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000017992 (Gene tree)
Gene ID: 100477446
Gene Symbol: DDX50
Alias: GU2|GUB|MGC3199|RH-II/GuB
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 37873 bases
Position: chrGL192368.1:2578451-2616323
Accession: 17906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000019012	GUCT	PF08152.12	5.3e-28	1	1
ENSAMEP00000019012	ResIII	PF04851.15	2.6e-10	1	1
ENSAMEP00000019012	DEAD	PF00270.29	2.4e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000019773	DDX50-201	2217	-	ENSAMEP00000019012	738 (aa)	-	G1MI27

Gene Model

Click here to download ENSAMEG00000017992's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000017992's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000017992	DDX50	50	34.218	ENSAMEG00000009232	DDX10	55	34.218
ENSAMEG00000017992	DDX50	50	31.536	ENSAMEG00000000966	EIF4A2	87	31.536
ENSAMEG00000017992	DDX50	50	32.533	ENSAMEG00000016753	EIF4A1	88	31.989
ENSAMEG00000017992	DDX50	82	67.980	ENSAMEG00000017978	DDX21	63	71.800
ENSAMEG00000017992	DDX50	50	32.723	ENSAMEG00000012626	DDX18	54	32.723
ENSAMEG00000017992	DDX50	55	32.864	ENSAMEG00000013627	DDX27	51	32.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000017992	DDX50	100	97.425	ENSG00000107625	DDX50	100	97.425	Homo_sapiens
ENSAMEG00000017992	DDX50	92	77.168	ENSANAG00000017785	-	92	77.299	Aotus_nancymaae
ENSAMEG00000017992	DDX50	100	97.019	ENSBTAG00000033413	DDX50	100	97.019	Bos_taurus
ENSAMEG00000017992	DDX50	100	97.561	ENSCJAG00000018844	DDX50	100	97.561	Callithrix_jacchus
ENSAMEG00000017992	DDX50	100	98.916	ENSCAFG00000013776	DDX50	100	98.916	Canis_familiaris
ENSAMEG00000017992	DDX50	100	98.916	ENSCAFG00020025977	DDX50	99	98.916	Canis_lupus_dingo
ENSAMEG00000017992	DDX50	100	96.748	ENSCHIG00000000285	DDX50	99	96.748	Capra_hircus
ENSAMEG00000017992	DDX50	100	96.748	ENSTSYG00000004192	DDX50	99	97.861	Carlito_syrichta
ENSAMEG00000017992	DDX50	88	78.362	ENSCAPG00000007230	-	88	78.321	Cavia_aperea
ENSAMEG00000017992	DDX50	91	95.556	ENSCPOG00000002131	-	93	95.461	Cavia_porcellus
ENSAMEG00000017992	DDX50	83	87.084	ENSCCAG00000030543	DDX50	91	87.255	Cebus_capucinus
ENSAMEG00000017992	DDX50	99	94.980	ENSCATG00000032463	DDX50	99	94.980	Cercocebus_atys
ENSAMEG00000017992	DDX50	98	72.061	ENSCATG00000035153	-	90	89.164	Cercocebus_atys
ENSAMEG00000017992	DDX50	99	65.857	ENSCATG00000039259	-	90	67.201	Cercocebus_atys
ENSAMEG00000017992	DDX50	97	70.572	ENSCLAG00000001938	-	92	71.450	Chinchilla_lanigera
ENSAMEG00000017992	DDX50	50	86.992	ENSCLAG00000001553	-	80	88.217	Chinchilla_lanigera
ENSAMEG00000017992	DDX50	100	96.883	ENSCLAG00000012957	-	100	96.883	Chinchilla_lanigera
ENSAMEG00000017992	DDX50	100	97.561	ENSCSAG00000007703	DDX50	100	97.561	Chlorocebus_sabaeus
ENSAMEG00000017992	DDX50	88	94.769	ENSCHOG00000000233	DDX50	98	94.801	Choloepus_hoffmanni
ENSAMEG00000017992	DDX50	100	83.604	ENSCANG00000036450	-	100	83.604	Colobus_angolensis_palliatus
ENSAMEG00000017992	DDX50	96	68.575	ENSCANG00000028077	-	92	68.023	Colobus_angolensis_palliatus
ENSAMEG00000017992	DDX50	86	72.397	ENSCANG00000018820	-	89	73.230	Colobus_angolensis_palliatus
ENSAMEG00000017992	DDX50	92	94.698	ENSCGRG00001020223	Ddx50	93	94.583	Cricetulus_griseus_chok1gshd
ENSAMEG00000017992	DDX50	92	94.822	ENSCGRG00000015884	Ddx50	93	94.575	Cricetulus_griseus_crigri
ENSAMEG00000017992	DDX50	88	89.368	ENSDNOG00000001675	DDX50	100	89.368	Dasypus_novemcinctus
ENSAMEG00000017992	DDX50	92	96.024	ENSDORG00000007310	Ddx50	93	96.047	Dipodomys_ordii
ENSAMEG00000017992	DDX50	90	97.124	ENSETEG00000014069	DDX50	90	97.124	Echinops_telfairi
ENSAMEG00000017992	DDX50	100	97.290	ENSEASG00005015595	DDX50	99	97.290	Equus_asinus_asinus
ENSAMEG00000017992	DDX50	100	97.425	ENSECAG00000023044	DDX50	99	97.425	Equus_caballus
ENSAMEG00000017992	DDX50	89	100.000	ENSEEUG00000005782	DDX50	82	100.000	Erinaceus_europaeus
ENSAMEG00000017992	DDX50	100	98.780	ENSFCAG00000012678	DDX50	99	98.780	Felis_catus
ENSAMEG00000017992	DDX50	92	88.807	ENSFDAG00000016109	-	92	88.873	Fukomys_damarensis
ENSAMEG00000017992	DDX50	52	70.833	ENSGGOG00000022568	-	92	78.419	Gorilla_gorilla
ENSAMEG00000017992	DDX50	51	82.804	ENSGGOG00000041063	-	83	84.830	Gorilla_gorilla
ENSAMEG00000017992	DDX50	100	97.425	ENSGGOG00000010100	DDX50	99	98.930	Gorilla_gorilla
ENSAMEG00000017992	DDX50	92	94.551	ENSHGLG00000013466	DDX50	93	94.583	Heterocephalus_glaber_female
ENSAMEG00000017992	DDX50	82	87.766	ENSHGLG00100006568	-	93	88.021	Heterocephalus_glaber_male
ENSAMEG00000017992	DDX50	92	94.551	ENSHGLG00100017191	DDX50	93	94.583	Heterocephalus_glaber_male
ENSAMEG00000017992	DDX50	100	94.723	ENSSTOG00000021852	-	100	94.452	Ictidomys_tridecemlineatus
ENSAMEG00000017992	DDX50	100	94.173	ENSJJAG00000023928	-	93	94.143	Jaculus_jaculus
ENSAMEG00000017992	DDX50	100	73.046	ENSJJAG00000019626	-	91	73.273	Jaculus_jaculus
ENSAMEG00000017992	DDX50	100	96.748	ENSLAFG00000006186	DDX50	100	96.748	Loxodonta_africana
ENSAMEG00000017992	DDX50	98	71.231	ENSMFAG00000045339	-	90	88.235	Macaca_fascicularis
ENSAMEG00000017992	DDX50	100	97.561	ENSMFAG00000044067	DDX50	100	97.561	Macaca_fascicularis
ENSAMEG00000017992	DDX50	100	97.561	ENSMMUG00000001006	DDX50	100	98.514	Macaca_mulatta
ENSAMEG00000017992	DDX50	88	67.233	ENSMMUG00000045343	-	81	68.182	Macaca_mulatta
ENSAMEG00000017992	DDX50	92	90.574	ENSMNEG00000031664	DDX50	92	90.630	Macaca_nemestrina
ENSAMEG00000017992	DDX50	98	72.452	ENSMNEG00000045530	-	92	87.879	Macaca_nemestrina
ENSAMEG00000017992	DDX50	100	95.664	ENSMLEG00000037313	DDX50	100	95.664	Mandrillus_leucophaeus
ENSAMEG00000017992	DDX50	86	83.879	ENSMLEG00000041988	-	90	87.212	Mandrillus_leucophaeus
ENSAMEG00000017992	DDX50	56	92.512	ENSMAUG00000022192	Ddx50	100	92.512	Mesocricetus_auratus
ENSAMEG00000017992	DDX50	100	89.566	ENSMICG00000017539	DDX50	100	89.566	Microcebus_murinus
ENSAMEG00000017992	DDX50	92	94.420	ENSMOCG00000001676	Ddx50	93	93.869	Microtus_ochrogaster
ENSAMEG00000017992	DDX50	92	79.941	ENSMODG00000010741	DDX50	92	80.290	Monodelphis_domestica
ENSAMEG00000017992	DDX50	92	93.373	MGP_CAROLIEiJ_G0015389	Ddx50	93	94.143	Mus_caroli
ENSAMEG00000017992	DDX50	92	93.814	ENSMUSG00000020076	Ddx50	93	94.436	Mus_musculus
ENSAMEG00000017992	DDX50	92	93.962	MGP_PahariEiJ_G0030805	Ddx50	93	94.583	Mus_pahari
ENSAMEG00000017992	DDX50	92	93.814	MGP_SPRETEiJ_G0016200	Ddx50	93	94.436	Mus_spretus
ENSAMEG00000017992	DDX50	88	98.302	ENSMPUG00000004589	DDX50	99	98.302	Mustela_putorius_furo
ENSAMEG00000017992	DDX50	100	95.528	ENSMLUG00000017590	DDX50	100	95.528	Myotis_lucifugus
ENSAMEG00000017992	DDX50	92	95.582	ENSNGAG00000004283	Ddx50	93	95.608	Nannospalax_galili
ENSAMEG00000017992	DDX50	100	97.425	ENSNLEG00000011631	DDX50	100	97.425	Nomascus_leucogenys
ENSAMEG00000017992	DDX50	87	68.789	ENSNLEG00000035506	-	89	77.846	Nomascus_leucogenys
ENSAMEG00000017992	DDX50	92	93.667	ENSOPRG00000001619	DDX50	93	94.436	Ochotona_princeps
ENSAMEG00000017992	DDX50	92	95.287	ENSODEG00000014597	-	93	95.754	Octodon_degus
ENSAMEG00000017992	DDX50	93	67.239	ENSOANG00000004776	DDX50	76	71.739	Ornithorhynchus_anatinus
ENSAMEG00000017992	DDX50	95	93.696	ENSOCUG00000002879	DDX50	95	95.154	Oryctolagus_cuniculus
ENSAMEG00000017992	DDX50	100	97.019	ENSOGAG00000001844	DDX50	100	97.019	Otolemur_garnettii
ENSAMEG00000017992	DDX50	100	96.748	ENSOARG00000005264	DDX50	99	96.748	Ovis_aries
ENSAMEG00000017992	DDX50	100	97.561	ENSPPAG00000040723	DDX50	100	97.561	Pan_paniscus
ENSAMEG00000017992	DDX50	51	70.789	ENSPPAG00000026788	-	91	78.462	Pan_paniscus
ENSAMEG00000017992	DDX50	100	98.780	ENSPPRG00000015826	DDX50	100	98.780	Panthera_pardus
ENSAMEG00000017992	DDX50	100	98.780	ENSPTIG00000008454	DDX50	100	98.780	Panthera_tigris_altaica
ENSAMEG00000017992	DDX50	51	70.789	ENSPTRG00000044913	-	91	78.769	Pan_troglodytes
ENSAMEG00000017992	DDX50	100	97.561	ENSPTRG00000002562	DDX50	100	97.561	Pan_troglodytes
ENSAMEG00000017992	DDX50	92	89.838	ENSPANG00000022143	-	92	89.898	Papio_anubis
ENSAMEG00000017992	DDX50	92	93.667	ENSPEMG00000020899	-	93	93.558	Peromyscus_maniculatus_bairdii
ENSAMEG00000017992	DDX50	92	79.736	ENSPCIG00000016036	DDX50	95	79.767	Phascolarctos_cinereus
ENSAMEG00000017992	DDX50	91	98.366	ENSPPYG00000002390	DDX50	100	98.366	Pongo_abelii
ENSAMEG00000017992	DDX50	84	82.496	ENSPCAG00000009692	DDX50	100	82.496	Procavia_capensis
ENSAMEG00000017992	DDX50	79	89.552	ENSPCOG00000012574	DDX50	90	90.164	Propithecus_coquereli
ENSAMEG00000017992	DDX50	86	95.330	ENSPVAG00000009519	DDX50	78	95.330	Pteropus_vampyrus
ENSAMEG00000017992	DDX50	92	93.225	ENSRNOG00000000396	Ddx50	98	97.861	Rattus_norvegicus
ENSAMEG00000017992	DDX50	99	66.622	ENSRBIG00000039673	-	90	65.889	Rhinopithecus_bieti
ENSAMEG00000017992	DDX50	87	95.807	ENSRBIG00000042841	-	98	97.942	Rhinopithecus_bieti
ENSAMEG00000017992	DDX50	99	67.575	ENSRBIG00000036573	-	92	67.747	Rhinopithecus_bieti
ENSAMEG00000017992	DDX50	100	97.290	ENSRROG00000032158	DDX50	100	98.071	Rhinopithecus_roxellana
ENSAMEG00000017992	DDX50	99	64.858	ENSRROG00000022853	-	92	64.516	Rhinopithecus_roxellana
ENSAMEG00000017992	DDX50	52	70.757	ENSRROG00000031940	-	88	74.772	Rhinopithecus_roxellana
ENSAMEG00000017992	DDX50	92	85.862	ENSSBOG00000014441	DDX50	99	87.322	Saimiri_boliviensis_boliviensis
ENSAMEG00000017992	DDX50	88	80.880	ENSSHAG00000005690	DDX50	92	80.873	Sarcophilus_harrisii
ENSAMEG00000017992	DDX50	79	67.613	ENSSHAG00000005334	-	80	67.430	Sarcophilus_harrisii
ENSAMEG00000017992	DDX50	100	80.217	ENSSARG00000013553	DDX50	88	87.926	Sorex_araneus
ENSAMEG00000017992	DDX50	100	96.206	ENSSSCG00000010246	DDX50	99	96.206	Sus_scrofa
ENSAMEG00000017992	DDX50	96	74.438	ENSTBEG00000001085	DDX50	92	74.378	Tupaia_belangeri
ENSAMEG00000017992	DDX50	100	90.921	ENSTTRG00000012408	DDX50	99	90.921	Tursiops_truncatus
ENSAMEG00000017992	DDX50	100	99.458	ENSUAMG00000010976	DDX50	100	99.458	Ursus_americanus
ENSAMEG00000017992	DDX50	100	99.458	ENSUMAG00000007726	DDX50	99	99.458	Ursus_maritimus
ENSAMEG00000017992	DDX50	100	97.019	ENSVPAG00000000626	DDX50	100	97.019	Vicugna_pacos
ENSAMEG00000017992	DDX50	82	93.201	ENSVVUG00000020366	DDX50	98	99.198	Vulpes_vulpes