EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000018321 (Gene tree)
Gene ID: 100481843
Gene Symbol: LSM12
Alias: FLJ30656
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 19623 bases
Position: chrGL192699.1:473291-492913
Accession: 26407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000019360	AD	PF09793.9	1.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000020127	LSM12-201	594	-	ENSAMEP00000019360	198 (aa)	-	G1MJ25

Gene Model

Click here to download ENSAMEG00000018321's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000018321's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000018321	LSM12	100	97.980	ENSG00000161654	LSM12	100	97.980	Homo_sapiens
ENSAMEG00000018321	LSM12	100	84.422	ENSAPOG00000007907	lsm12b	100	84.422	Acanthochromis_polyacanthus
ENSAMEG00000018321	LSM12	100	82.412	ENSACIG00000008538	lsm12b	100	82.412	Amphilophus_citrinellus
ENSAMEG00000018321	LSM12	100	83.920	ENSAOCG00000021847	lsm12b	88	83.920	Amphiprion_ocellaris
ENSAMEG00000018321	LSM12	100	83.920	ENSAPEG00000002252	lsm12b	100	83.920	Amphiprion_percula
ENSAMEG00000018321	LSM12	100	83.417	ENSATEG00000005705	lsm12b	100	83.417	Anabas_testudineus
ENSAMEG00000018321	LSM12	99	91.837	ENSACAG00000004618	LSM12	99	91.837	Anolis_carolinensis
ENSAMEG00000018321	LSM12	100	97.980	ENSANAG00000029011	LSM12	100	100.000	Aotus_nancymaae
ENSAMEG00000018321	LSM12	100	82.915	ENSACLG00000026332	lsm12b	100	82.915	Astatotilapia_calliptera
ENSAMEG00000018321	LSM12	100	82.915	ENSAMXG00000032952	lsm12b	100	82.915	Astyanax_mexicanus
ENSAMEG00000018321	LSM12	100	77.387	ENSAMXG00000036117	lsm12a	91	77.387	Astyanax_mexicanus
ENSAMEG00000018321	LSM12	100	97.980	ENSBTAG00000016252	LSM12	100	97.980	Bos_taurus
ENSAMEG00000018321	LSM12	100	97.980	ENSCJAG00000048480	LSM12	100	100.000	Callithrix_jacchus
ENSAMEG00000018321	LSM12	100	97.980	ENSCAFG00000014379	LSM12	92	97.980	Canis_familiaris
ENSAMEG00000018321	LSM12	100	97.980	ENSCAFG00020012173	LSM12	100	97.980	Canis_lupus_dingo
ENSAMEG00000018321	LSM12	100	97.980	ENSCHIG00000018175	LSM12	100	97.980	Capra_hircus
ENSAMEG00000018321	LSM12	100	97.980	ENSTSYG00000036361	LSM12	100	97.980	Carlito_syrichta
ENSAMEG00000018321	LSM12	81	96.875	ENSCAPG00000009647	LSM12	87	96.875	Cavia_aperea
ENSAMEG00000018321	LSM12	100	95.960	ENSCPOG00000012860	LSM12	100	98.165	Cavia_porcellus
ENSAMEG00000018321	LSM12	100	97.980	ENSCCAG00000032905	LSM12	100	100.000	Cebus_capucinus
ENSAMEG00000018321	LSM12	100	97.980	ENSCATG00000030577	-	100	100.000	Cercocebus_atys
ENSAMEG00000018321	LSM12	100	96.970	ENSCLAG00000015759	LSM12	100	98.165	Chinchilla_lanigera
ENSAMEG00000018321	LSM12	100	97.475	ENSCSAG00000003486	LSM12	100	97.475	Chlorocebus_sabaeus
ENSAMEG00000018321	LSM12	55	99.083	ENSCHOG00000001198	LSM12	100	99.083	Choloepus_hoffmanni
ENSAMEG00000018321	LSM12	99	91.327	ENSCPBG00000027105	LSM12	99	91.327	Chrysemys_picta_bellii
ENSAMEG00000018321	LSM12	100	97.980	ENSCANG00000043328	LSM12	100	100.000	Colobus_angolensis_palliatus
ENSAMEG00000018321	LSM12	100	97.980	ENSCGRG00001002094	Lsm12	100	100.000	Cricetulus_griseus_chok1gshd
ENSAMEG00000018321	LSM12	78	99.351	ENSCGRG00000004316	Lsm12	87	99.351	Cricetulus_griseus_crigri
ENSAMEG00000018321	LSM12	100	82.915	ENSCSEG00000008434	lsm12b	100	82.915	Cynoglossus_semilaevis
ENSAMEG00000018321	LSM12	100	82.915	ENSCVAG00000008755	lsm12b	100	82.915	Cyprinodon_variegatus
ENSAMEG00000018321	LSM12	100	83.417	ENSDARG00000109510	lsm12b	100	83.417	Danio_rerio
ENSAMEG00000018321	LSM12	100	75.377	ENSDARG00000028848	lsm12a	100	75.377	Danio_rerio
ENSAMEG00000018321	LSM12	100	97.475	ENSDNOG00000002418	LSM12	91	97.475	Dasypus_novemcinctus
ENSAMEG00000018321	LSM12	100	97.980	ENSDORG00000016381	Lsm12	100	100.000	Dipodomys_ordii
ENSAMEG00000018321	LSM12	74	30.435	FBgn0036057	CG14164	83	30.435	Drosophila_melanogaster
ENSAMEG00000018321	LSM12	83	31.953	FBgn0030364	Lsm12	76	31.765	Drosophila_melanogaster
ENSAMEG00000018321	LSM12	90	85.955	ENSETEG00000011012	-	100	85.955	Echinops_telfairi
ENSAMEG00000018321	LSM12	100	97.475	ENSETEG00000008374	LSM12	100	97.475	Echinops_telfairi
ENSAMEG00000018321	LSM12	84	61.677	ENSEBUG00000016299	lsm12a	92	61.677	Eptatretus_burgeri
ENSAMEG00000018321	LSM12	100	97.980	ENSEASG00005010155	LSM12	100	97.980	Equus_asinus_asinus
ENSAMEG00000018321	LSM12	100	97.980	ENSECAG00000009071	LSM12	100	100.000	Equus_caballus
ENSAMEG00000018321	LSM12	77	98.693	ENSEEUG00000002419	-	100	98.693	Erinaceus_europaeus
ENSAMEG00000018321	LSM12	100	80.402	ENSELUG00000000256	-	100	80.402	Esox_lucius
ENSAMEG00000018321	LSM12	100	82.412	ENSELUG00000015538	lsm12b	100	77.889	Esox_lucius
ENSAMEG00000018321	LSM12	100	97.980	ENSFCAG00000037021	LSM12	100	97.980	Felis_catus
ENSAMEG00000018321	LSM12	75	99.324	ENSFDAG00000008954	LSM12	87	99.324	Fukomys_damarensis
ENSAMEG00000018321	LSM12	100	81.910	ENSFHEG00000019913	lsm12b	100	81.910	Fundulus_heteroclitus
ENSAMEG00000018321	LSM12	80	81.646	ENSGMOG00000015449	lsm12b	100	81.646	Gadus_morhua
ENSAMEG00000018321	LSM12	77	94.118	ENSGALG00000039803	LSM12	100	94.118	Gallus_gallus
ENSAMEG00000018321	LSM12	100	82.412	ENSGAFG00000011829	lsm12b	100	82.412	Gambusia_affinis
ENSAMEG00000018321	LSM12	80	82.278	ENSGACG00000003428	lsm12b	100	82.278	Gasterosteus_aculeatus
ENSAMEG00000018321	LSM12	99	92.347	ENSGAGG00000021965	LSM12	99	92.347	Gopherus_agassizii
ENSAMEG00000018321	LSM12	100	97.980	ENSGGOG00000010589	-	100	100.000	Gorilla_gorilla
ENSAMEG00000018321	LSM12	85	83.529	ENSHBUG00000007667	lsm12b	74	83.529	Haplochromis_burtoni
ENSAMEG00000018321	LSM12	100	97.980	ENSHGLG00000011411	LSM12	100	100.000	Heterocephalus_glaber_female
ENSAMEG00000018321	LSM12	91	88.398	ENSHGLG00100000241	LSM12	96	88.398	Heterocephalus_glaber_male
ENSAMEG00000018321	LSM12	100	82.412	ENSHCOG00000002094	lsm12b	100	82.412	Hippocampus_comes
ENSAMEG00000018321	LSM12	100	83.417	ENSIPUG00000014800	lsm12	100	83.417	Ictalurus_punctatus
ENSAMEG00000018321	LSM12	99	74.112	ENSIPUG00000008936	lsm12a	99	74.112	Ictalurus_punctatus
ENSAMEG00000018321	LSM12	100	97.980	ENSSTOG00000007403	LSM12	100	100.000	Ictidomys_tridecemlineatus
ENSAMEG00000018321	LSM12	100	96.970	ENSJJAG00000004364	-	100	99.083	Jaculus_jaculus
ENSAMEG00000018321	LSM12	81	82.716	ENSJJAG00000014652	-	95	82.716	Jaculus_jaculus
ENSAMEG00000018321	LSM12	97	86.010	ENSJJAG00000011793	-	100	86.010	Jaculus_jaculus
ENSAMEG00000018321	LSM12	86	84.211	ENSKMAG00000007704	lsm12b	57	84.211	Kryptolebias_marmoratus
ENSAMEG00000018321	LSM12	100	83.920	ENSLBEG00000027999	lsm12b	100	83.920	Labrus_bergylta
ENSAMEG00000018321	LSM12	99	88.265	ENSLACG00000015981	LSM12	99	88.265	Latimeria_chalumnae
ENSAMEG00000018321	LSM12	100	81.910	ENSLOCG00000013079	lsm12b	99	81.910	Lepisosteus_oculatus
ENSAMEG00000018321	LSM12	100	97.980	ENSLAFG00000005202	LSM12	100	97.980	Loxodonta_africana
ENSAMEG00000018321	LSM12	100	97.980	ENSMFAG00000031376	LSM12	100	100.000	Macaca_fascicularis
ENSAMEG00000018321	LSM12	64	86.207	ENSMMUG00000038408	-	100	86.207	Macaca_mulatta
ENSAMEG00000018321	LSM12	64	86.207	ENSMMUG00000042106	-	100	86.207	Macaca_mulatta
ENSAMEG00000018321	LSM12	100	97.980	ENSMMUG00000006804	LSM12	100	100.000	Macaca_mulatta
ENSAMEG00000018321	LSM12	100	97.980	ENSMNEG00000030594	-	100	100.000	Macaca_nemestrina
ENSAMEG00000018321	LSM12	100	97.980	ENSMLEG00000039934	LSM12	100	100.000	Mandrillus_leucophaeus
ENSAMEG00000018321	LSM12	100	83.417	ENSMAMG00000004279	lsm12b	100	83.417	Mastacembelus_armatus
ENSAMEG00000018321	LSM12	100	82.915	ENSMZEG00005005754	lsm12b	100	82.915	Maylandia_zebra
ENSAMEG00000018321	LSM12	100	97.475	ENSMICG00000037219	LSM12	100	99.083	Microcebus_murinus
ENSAMEG00000018321	LSM12	100	82.323	ENSMOCG00000017015	-	86	82.323	Microtus_ochrogaster
ENSAMEG00000018321	LSM12	100	97.980	ENSMOCG00000019878	-	100	100.000	Microtus_ochrogaster
ENSAMEG00000018321	LSM12	100	83.417	ENSMMOG00000020848	lsm12b	100	83.417	Mola_mola
ENSAMEG00000018321	LSM12	100	83.417	ENSMALG00000007578	lsm12b	100	83.417	Monopterus_albus
ENSAMEG00000018321	LSM12	100	97.475	MGP_CAROLIEiJ_G0017241	Lsm12	100	99.083	Mus_caroli
ENSAMEG00000018321	LSM12	100	97.980	ENSMUSG00000020922	Lsm12	100	100.000	Mus_musculus
ENSAMEG00000018321	LSM12	100	90.233	MGP_PahariEiJ_G0018371	Lsm12	100	100.000	Mus_pahari
ENSAMEG00000018321	LSM12	100	97.475	MGP_SPRETEiJ_G0018084	Lsm12	99	100.000	Mus_spretus
ENSAMEG00000018321	LSM12	100	97.475	ENSMLUG00000006391	LSM12	100	97.475	Myotis_lucifugus
ENSAMEG00000018321	LSM12	100	66.832	ENSNGAG00000015429	-	100	66.832	Nannospalax_galili
ENSAMEG00000018321	LSM12	100	97.980	ENSNGAG00000001870	Lsm12	100	100.000	Nannospalax_galili
ENSAMEG00000018321	LSM12	100	82.915	ENSNBRG00000006266	lsm12b	100	82.915	Neolamprologus_brichardi
ENSAMEG00000018321	LSM12	100	97.980	ENSNLEG00000005580	-	100	100.000	Nomascus_leucogenys
ENSAMEG00000018321	LSM12	85	95.833	ENSMEUG00000007501	-	100	95.833	Notamacropus_eugenii
ENSAMEG00000018321	LSM12	100	97.980	ENSOPRG00000008552	LSM12	100	97.980	Ochotona_princeps
ENSAMEG00000018321	LSM12	100	86.869	ENSODEG00000007886	-	74	86.869	Octodon_degus
ENSAMEG00000018321	LSM12	100	96.465	ENSODEG00000017998	-	100	98.165	Octodon_degus
ENSAMEG00000018321	LSM12	100	82.915	ENSONIG00000007933	lsm12b	100	82.915	Oreochromis_niloticus
ENSAMEG00000018321	LSM12	100	100.000	ENSOCUG00000008566	-	100	100.000	Oryctolagus_cuniculus
ENSAMEG00000018321	LSM12	99	91.371	ENSOCUG00000021254	-	100	91.371	Oryctolagus_cuniculus
ENSAMEG00000018321	LSM12	99	90.355	ENSOCUG00000024823	-	100	90.355	Oryctolagus_cuniculus
ENSAMEG00000018321	LSM12	99	91.371	ENSOCUG00000027889	-	100	91.371	Oryctolagus_cuniculus
ENSAMEG00000018321	LSM12	100	83.417	ENSORLG00000011310	lsm12b	100	83.417	Oryzias_latipes
ENSAMEG00000018321	LSM12	100	83.417	ENSORLG00020002060	lsm12b	92	83.417	Oryzias_latipes_hni
ENSAMEG00000018321	LSM12	100	83.417	ENSORLG00015001647	lsm12b	92	83.417	Oryzias_latipes_hsok
ENSAMEG00000018321	LSM12	100	83.417	ENSOMEG00000006184	lsm12b	92	83.417	Oryzias_melastigma
ENSAMEG00000018321	LSM12	100	97.475	ENSOGAG00000010489	LSM12	100	97.475	Otolemur_garnettii
ENSAMEG00000018321	LSM12	100	98.507	ENSOARG00000006589	LSM12	100	98.507	Ovis_aries
ENSAMEG00000018321	LSM12	100	88.384	ENSPPAG00000034974	-	92	100.000	Pan_paniscus
ENSAMEG00000018321	LSM12	100	97.980	ENSPPRG00000023420	LSM12	100	97.980	Panthera_pardus
ENSAMEG00000018321	LSM12	77	100.000	ENSPTIG00000012704	-	82	100.000	Panthera_tigris_altaica
ENSAMEG00000018321	LSM12	72	96.396	ENSPTIG00000014850	-	100	96.396	Panthera_tigris_altaica
ENSAMEG00000018321	LSM12	100	97.980	ENSPTRG00000009261	LSM12	100	100.000	Pan_troglodytes
ENSAMEG00000018321	LSM12	100	97.980	ENSPANG00000021315	-	100	100.000	Papio_anubis
ENSAMEG00000018321	LSM12	100	84.422	ENSPKIG00000021058	lsm12b	100	84.422	Paramormyrops_kingsleyae
ENSAMEG00000018321	LSM12	99	75.127	ENSPKIG00000017932	-	99	75.127	Paramormyrops_kingsleyae
ENSAMEG00000018321	LSM12	100	82.915	ENSPMGG00000021344	lsm12b	100	82.915	Periophthalmus_magnuspinnatus
ENSAMEG00000018321	LSM12	100	97.980	ENSPEMG00000012199	Lsm12	100	100.000	Peromyscus_maniculatus_bairdii
ENSAMEG00000018321	LSM12	88	64.571	ENSPMAG00000005461	lsm12a	99	64.571	Petromyzon_marinus
ENSAMEG00000018321	LSM12	100	94.949	ENSPCIG00000020244	LSM12	100	94.949	Phascolarctos_cinereus
ENSAMEG00000018321	LSM12	100	81.407	ENSPFOG00000015930	lsm12b	100	81.407	Poecilia_formosa
ENSAMEG00000018321	LSM12	100	81.407	ENSPLAG00000021089	lsm12b	100	81.407	Poecilia_latipinna
ENSAMEG00000018321	LSM12	100	81.407	ENSPMEG00000012961	lsm12b	100	81.407	Poecilia_mexicana
ENSAMEG00000018321	LSM12	88	83.333	ENSPREG00000010236	lsm12b	95	83.333	Poecilia_reticulata
ENSAMEG00000018321	LSM12	100	97.980	ENSPPYG00000008344	LSM12	100	97.980	Pongo_abelii
ENSAMEG00000018321	LSM12	82	96.914	ENSPCAG00000008790	LSM12	100	96.914	Procavia_capensis
ENSAMEG00000018321	LSM12	100	97.980	ENSPCOG00000027951	LSM12	100	100.000	Propithecus_coquereli
ENSAMEG00000018321	LSM12	100	97.475	ENSPVAG00000013706	LSM12	100	97.475	Pteropus_vampyrus
ENSAMEG00000018321	LSM12	100	82.915	ENSPNYG00000003386	lsm12b	100	82.915	Pundamilia_nyererei
ENSAMEG00000018321	LSM12	100	75.377	ENSPNAG00000018435	lsm12a	100	75.377	Pygocentrus_nattereri
ENSAMEG00000018321	LSM12	100	81.407	ENSPNAG00000004186	lsm12b	100	81.407	Pygocentrus_nattereri
ENSAMEG00000018321	LSM12	100	97.980	ENSRNOG00000020894	Lsm12	100	97.980	Rattus_norvegicus
ENSAMEG00000018321	LSM12	100	97.980	ENSRBIG00000027910	LSM12	100	100.000	Rhinopithecus_bieti
ENSAMEG00000018321	LSM12	81	82.759	ENSRROG00000000537	-	100	82.759	Rhinopithecus_roxellana
ENSAMEG00000018321	LSM12	100	97.980	ENSRROG00000045530	-	100	100.000	Rhinopithecus_roxellana
ENSAMEG00000018321	LSM12	100	97.980	ENSSBOG00000025310	LSM12	100	100.000	Saimiri_boliviensis_boliviensis
ENSAMEG00000018321	LSM12	78	96.104	ENSSHAG00000014914	LSM12	97	96.104	Sarcophilus_harrisii
ENSAMEG00000018321	LSM12	100	84.422	ENSSFOG00015009612	lsm12	100	84.422	Scleropages_formosus
ENSAMEG00000018321	LSM12	100	81.407	ENSSFOG00015020392	lsm12a	100	81.407	Scleropages_formosus
ENSAMEG00000018321	LSM12	100	83.417	ENSSMAG00000008089	lsm12b	100	83.417	Scophthalmus_maximus
ENSAMEG00000018321	LSM12	100	84.422	ENSSDUG00000012711	lsm12b	100	84.422	Seriola_dumerili
ENSAMEG00000018321	LSM12	100	84.422	ENSSLDG00000007404	lsm12b	100	84.422	Seriola_lalandi_dorsalis
ENSAMEG00000018321	LSM12	77	99.346	ENSSARG00000005537	LSM12	100	99.346	Sorex_araneus
ENSAMEG00000018321	LSM12	99	92.857	ENSSPUG00000011984	LSM12	99	92.857	Sphenodon_punctatus
ENSAMEG00000018321	LSM12	100	83.920	ENSSPAG00000017058	lsm12b	100	83.920	Stegastes_partitus
ENSAMEG00000018321	LSM12	100	97.980	ENSSSCG00000032394	LSM12	100	97.980	Sus_scrofa
ENSAMEG00000018321	LSM12	100	82.412	ENSTRUG00000007121	lsm12b	100	82.412	Takifugu_rubripes
ENSAMEG00000018321	LSM12	100	82.915	ENSTNIG00000014436	lsm12b	100	82.915	Tetraodon_nigroviridis
ENSAMEG00000018321	LSM12	100	94.444	ENSTBEG00000012392	-	100	94.444	Tupaia_belangeri
ENSAMEG00000018321	LSM12	100	97.475	ENSTBEG00000012523	-	100	97.475	Tupaia_belangeri
ENSAMEG00000018321	LSM12	100	97.980	ENSTTRG00000010433	LSM12	100	97.980	Tursiops_truncatus
ENSAMEG00000018321	LSM12	100	97.980	ENSUAMG00000006313	LSM12	100	97.980	Ursus_americanus
ENSAMEG00000018321	LSM12	80	98.734	ENSUMAG00000012987	LSM12	90	98.734	Ursus_maritimus
ENSAMEG00000018321	LSM12	100	92.424	ENSVPAG00000011145	LSM12	100	92.424	Vicugna_pacos
ENSAMEG00000018321	LSM12	100	97.980	ENSVVUG00000017581	LSM12	100	97.980	Vulpes_vulpes
ENSAMEG00000018321	LSM12	82	63.804	ENSXETG00000003371	lsm12	77	63.804	Xenopus_tropicalis
ENSAMEG00000018321	LSM12	100	82.412	ENSXCOG00000003994	lsm12b	100	82.412	Xiphophorus_couchianus
ENSAMEG00000018321	LSM12	100	82.412	ENSXMAG00000020950	lsm12b	100	82.412	Xiphophorus_maculatus