EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000019685 (Gene tree)
Gene ID: 100476294
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 2751 bases
Position: chrGL192446.1:714097-716847
Accession: 6601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000020739	RNA_ligase	PF09414.10	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000021508	LIG4-201	2751	-	ENSAMEP00000020739	916 (aa)	-	G1MMZ0

Gene Model

Click here to download ENSAMEG00000019685's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000019685's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000019685	LIG4	99	89.352	ENSG00000174405	LIG4	100	89.810	Homo_sapiens
ENSAMEG00000019685	LIG4	99	64.301	ENSAPOG00000000866	lig4	99	64.629	Acanthochromis_polyacanthus
ENSAMEG00000019685	LIG4	99	64.114	ENSACIG00000018309	lig4	99	64.442	Amphilophus_citrinellus
ENSAMEG00000019685	LIG4	99	64.184	ENSAOCG00000011768	lig4	99	64.513	Amphiprion_ocellaris
ENSAMEG00000019685	LIG4	99	64.294	ENSAPEG00000017815	lig4	99	64.622	Amphiprion_percula
ENSAMEG00000019685	LIG4	99	64.474	ENSATEG00000005583	lig4	99	64.693	Anabas_testudineus
ENSAMEG00000019685	LIG4	96	73.295	ENSAPLG00000001673	LIG4	99	73.295	Anas_platyrhynchos
ENSAMEG00000019685	LIG4	99	72.667	ENSACAG00000014566	LIG4	100	72.667	Anolis_carolinensis
ENSAMEG00000019685	LIG4	99	88.145	ENSANAG00000012446	LIG4	100	88.145	Aotus_nancymaae
ENSAMEG00000019685	LIG4	99	64.372	ENSACLG00000027051	lig4	99	64.372	Astatotilapia_calliptera
ENSAMEG00000019685	LIG4	99	63.388	ENSAMXG00000008192	lig4	94	63.388	Astyanax_mexicanus
ENSAMEG00000019685	LIG4	99	87.925	ENSBTAG00000015868	LIG4	100	87.925	Bos_taurus
ENSAMEG00000019685	LIG4	99	87.377	ENSCJAG00000014689	LIG4	100	87.377	Callithrix_jacchus
ENSAMEG00000019685	LIG4	99	93.524	ENSCAFG00000006031	LIG4	100	93.524	Canis_familiaris
ENSAMEG00000019685	LIG4	99	93.524	ENSCAFG00020021230	LIG4	100	93.524	Canis_lupus_dingo
ENSAMEG00000019685	LIG4	99	87.596	ENSCHIG00000001019	LIG4	100	87.596	Capra_hircus
ENSAMEG00000019685	LIG4	99	87.154	ENSCAPG00000006284	LIG4	99	87.154	Cavia_aperea
ENSAMEG00000019685	LIG4	99	86.937	ENSCPOG00000014266	LIG4	100	86.937	Cavia_porcellus
ENSAMEG00000019685	LIG4	99	87.925	ENSCCAG00000019971	LIG4	100	87.925	Cebus_capucinus
ENSAMEG00000019685	LIG4	99	88.804	ENSCATG00000021075	LIG4	100	88.804	Cercocebus_atys
ENSAMEG00000019685	LIG4	99	87.267	ENSCLAG00000003376	LIG4	100	87.267	Chinchilla_lanigera
ENSAMEG00000019685	LIG4	99	89.243	ENSCSAG00000000211	LIG4	100	89.243	Chlorocebus_sabaeus
ENSAMEG00000019685	LIG4	99	76.354	ENSCPBG00000023291	LIG4	99	75.873	Chrysemys_picta_bellii
ENSAMEG00000019685	LIG4	69	44.844	ENSCING00000009536	-	97	44.844	Ciona_intestinalis
ENSAMEG00000019685	LIG4	83	44.751	ENSCSAVG00000010336	-	98	44.751	Ciona_savignyi
ENSAMEG00000019685	LIG4	99	88.913	ENSCANG00000005805	LIG4	100	88.913	Colobus_angolensis_palliatus
ENSAMEG00000019685	LIG4	99	83.772	ENSCGRG00001012072	Lig4	100	83.772	Cricetulus_griseus_chok1gshd
ENSAMEG00000019685	LIG4	99	83.772	ENSCGRG00000013417	Lig4	100	83.772	Cricetulus_griseus_crigri
ENSAMEG00000019685	LIG4	96	64.966	ENSCSEG00000013905	lig4	95	64.966	Cynoglossus_semilaevis
ENSAMEG00000019685	LIG4	99	64.474	ENSCVAG00000007896	lig4	99	64.474	Cyprinodon_variegatus
ENSAMEG00000019685	LIG4	99	62.732	ENSDARG00000060620	lig4	99	62.732	Danio_rerio
ENSAMEG00000019685	LIG4	99	87.171	ENSDNOG00000000513	LIG4	100	87.171	Dasypus_novemcinctus
ENSAMEG00000019685	LIG4	99	85.291	ENSDORG00000027303	Lig4	100	85.291	Dipodomys_ordii
ENSAMEG00000019685	LIG4	88	31.095	FBgn0030506	Lig4	90	31.095	Drosophila_melanogaster
ENSAMEG00000019685	LIG4	98	83.592	ENSETEG00000015563	LIG4	100	83.925	Echinops_telfairi
ENSAMEG00000019685	LIG4	99	43.783	ENSEBUG00000014243	lig4	99	43.783	Eptatretus_burgeri
ENSAMEG00000019685	LIG4	99	90.340	ENSEASG00005022073	LIG4	100	90.340	Equus_asinus_asinus
ENSAMEG00000019685	LIG4	99	90.121	ENSECAG00000003257	LIG4	100	90.121	Equus_caballus
ENSAMEG00000019685	LIG4	98	65.597	ENSELUG00000006787	lig4	99	65.708	Esox_lucius
ENSAMEG00000019685	LIG4	99	92.975	ENSFCAG00000031985	LIG4	100	92.975	Felis_catus
ENSAMEG00000019685	LIG4	89	73.833	ENSFALG00000004214	LIG4	99	73.833	Ficedula_albicollis
ENSAMEG00000019685	LIG4	99	86.608	ENSFDAG00000008973	LIG4	100	86.608	Fukomys_damarensis
ENSAMEG00000019685	LIG4	99	64.035	ENSFHEG00000007398	lig4	90	64.035	Fundulus_heteroclitus
ENSAMEG00000019685	LIG4	85	63.800	ENSGMOG00000012843	lig4	99	63.800	Gadus_morhua
ENSAMEG00000019685	LIG4	99	72.319	ENSGALG00000016854	LIG4	99	72.319	Gallus_gallus
ENSAMEG00000019685	LIG4	98	64.254	ENSGAFG00000019779	lig4	96	64.333	Gambusia_affinis
ENSAMEG00000019685	LIG4	99	62.118	ENSGACG00000014135	lig4	100	62.242	Gasterosteus_aculeatus
ENSAMEG00000019685	LIG4	99	89.462	ENSGGOG00000027771	LIG4	100	89.462	Gorilla_gorilla
ENSAMEG00000019685	LIG4	99	64.153	ENSHBUG00000006245	lig4	99	64.153	Haplochromis_burtoni
ENSAMEG00000019685	LIG4	99	86.937	ENSHGLG00000000718	LIG4	100	86.937	Heterocephalus_glaber_female
ENSAMEG00000019685	LIG4	99	86.937	ENSHGLG00100003265	LIG4	100	86.937	Heterocephalus_glaber_male
ENSAMEG00000019685	LIG4	99	63.417	ENSHCOG00000012010	lig4	99	63.417	Hippocampus_comes
ENSAMEG00000019685	LIG4	99	64.738	ENSIPUG00000013748	lig4	99	64.738	Ictalurus_punctatus
ENSAMEG00000019685	LIG4	99	86.937	ENSSTOG00000024303	LIG4	100	86.937	Ictidomys_tridecemlineatus
ENSAMEG00000019685	LIG4	99	85.840	ENSJJAG00000006750	Lig4	100	85.840	Jaculus_jaculus
ENSAMEG00000019685	LIG4	99	64.693	ENSKMAG00000001149	lig4	99	64.693	Kryptolebias_marmoratus
ENSAMEG00000019685	LIG4	91	64.663	ENSLBEG00000014578	lig4	100	65.024	Labrus_bergylta
ENSAMEG00000019685	LIG4	99	71.318	ENSLACG00000003282	LIG4	99	71.318	Latimeria_chalumnae
ENSAMEG00000019685	LIG4	100	68.192	ENSLOCG00000008901	lig4	99	68.192	Lepisosteus_oculatus
ENSAMEG00000019685	LIG4	99	85.652	ENSLAFG00000031152	LIG4	100	85.652	Loxodonta_africana
ENSAMEG00000019685	LIG4	99	89.023	ENSMFAG00000037235	LIG4	100	89.023	Macaca_fascicularis
ENSAMEG00000019685	LIG4	99	89.023	ENSMMUG00000008874	LIG4	100	89.023	Macaca_mulatta
ENSAMEG00000019685	LIG4	99	89.023	ENSMNEG00000023575	LIG4	100	89.023	Macaca_nemestrina
ENSAMEG00000019685	LIG4	99	88.913	ENSMLEG00000026720	LIG4	100	88.913	Mandrillus_leucophaeus
ENSAMEG00000019685	LIG4	99	64.474	ENSMAMG00000008472	lig4	99	64.803	Mastacembelus_armatus
ENSAMEG00000019685	LIG4	99	64.784	ENSMZEG00005001855	lig4	99	64.372	Maylandia_zebra
ENSAMEG00000019685	LIG4	99	73.085	ENSMGAG00000015532	LIG4	99	73.085	Meleagris_gallopavo
ENSAMEG00000019685	LIG4	99	82.327	ENSMOCG00000019000	Lig4	100	82.327	Microtus_ochrogaster
ENSAMEG00000019685	LIG4	99	63.606	ENSMMOG00000004390	lig4	99	63.606	Mola_mola
ENSAMEG00000019685	LIG4	99	81.998	ENSMODG00000025064	LIG4	100	82.456	Monodelphis_domestica
ENSAMEG00000019685	LIG4	99	63.925	ENSMALG00000008555	lig4	99	63.925	Monopterus_albus
ENSAMEG00000019685	LIG4	99	83.974	MGP_CAROLIEiJ_G0030809	Lig4	100	83.974	Mus_caroli
ENSAMEG00000019685	LIG4	99	83.425	ENSMUSG00000049717	Lig4	100	83.425	Mus_musculus
ENSAMEG00000019685	LIG4	99	83.644	MGP_PahariEiJ_G0021270	Lig4	100	83.644	Mus_pahari
ENSAMEG00000019685	LIG4	99	83.535	MGP_SPRETEiJ_G0031917	Lig4	100	83.535	Mus_spretus
ENSAMEG00000019685	LIG4	99	93.524	ENSMPUG00000018675	LIG4	100	93.524	Mustela_putorius_furo
ENSAMEG00000019685	LIG4	99	88.913	ENSMLUG00000001267	LIG4	100	88.913	Myotis_lucifugus
ENSAMEG00000019685	LIG4	99	84.413	ENSNGAG00000013258	Lig4	100	84.413	Nannospalax_galili
ENSAMEG00000019685	LIG4	99	64.114	ENSNBRG00000021252	lig4	99	64.114	Neolamprologus_brichardi
ENSAMEG00000019685	LIG4	99	89.462	ENSNLEG00000007888	LIG4	100	89.462	Nomascus_leucogenys
ENSAMEG00000019685	LIG4	99	85.401	ENSOPRG00000005765	LIG4	100	85.401	Ochotona_princeps
ENSAMEG00000019685	LIG4	99	84.852	ENSODEG00000019683	LIG4	100	84.852	Octodon_degus
ENSAMEG00000019685	LIG4	100	63.943	ENSONIG00000011969	lig4	99	64.270	Oreochromis_niloticus
ENSAMEG00000019685	LIG4	99	88.035	ENSOCUG00000015734	LIG4	100	88.035	Oryctolagus_cuniculus
ENSAMEG00000019685	LIG4	99	63.129	ENSORLG00000004041	lig4	99	63.129	Oryzias_latipes
ENSAMEG00000019685	LIG4	99	63.239	ENSORLG00020019607	lig4	99	63.239	Oryzias_latipes_hni
ENSAMEG00000019685	LIG4	99	63.239	ENSORLG00015017754	lig4	99	63.239	Oryzias_latipes_hsok
ENSAMEG00000019685	LIG4	74	68.296	ENSOMEG00000003459	lig4	98	68.296	Oryzias_melastigma
ENSAMEG00000019685	LIG4	99	87.842	ENSOGAG00000032120	LIG4	99	87.842	Otolemur_garnettii
ENSAMEG00000019685	LIG4	81	89.396	ENSOARG00000005590	LIG4	98	89.396	Ovis_aries
ENSAMEG00000019685	LIG4	99	88.913	ENSPPAG00000032998	LIG4	100	88.913	Pan_paniscus
ENSAMEG00000019685	LIG4	99	92.755	ENSPPRG00000017804	LIG4	100	92.755	Panthera_pardus
ENSAMEG00000019685	LIG4	99	92.426	ENSPTIG00000010051	LIG4	100	92.426	Panthera_tigris_altaica
ENSAMEG00000019685	LIG4	99	89.023	ENSPTRG00000006025	LIG4	100	89.023	Pan_troglodytes
ENSAMEG00000019685	LIG4	99	88.913	ENSPANG00000007562	LIG4	100	88.913	Papio_anubis
ENSAMEG00000019685	LIG4	99	65.934	ENSPKIG00000011645	lig4	98	65.934	Paramormyrops_kingsleyae
ENSAMEG00000019685	LIG4	99	75.960	ENSPSIG00000001504	LIG4	99	75.960	Pelodiscus_sinensis
ENSAMEG00000019685	LIG4	98	62.222	ENSPMGG00000013486	lig4	99	61.572	Periophthalmus_magnuspinnatus
ENSAMEG00000019685	LIG4	99	84.320	ENSPEMG00000000076	Lig4	100	84.320	Peromyscus_maniculatus_bairdii
ENSAMEG00000019685	LIG4	99	82.018	ENSPCIG00000021882	LIG4	100	82.018	Phascolarctos_cinereus
ENSAMEG00000019685	LIG4	98	64.850	ENSPFOG00000000797	lig4	99	64.333	Poecilia_formosa
ENSAMEG00000019685	LIG4	98	64.739	ENSPLAG00000001196	lig4	99	64.223	Poecilia_latipinna
ENSAMEG00000019685	LIG4	98	64.850	ENSPMEG00000021353	lig4	99	64.442	Poecilia_mexicana
ENSAMEG00000019685	LIG4	98	64.627	ENSPREG00000007323	lig4	99	64.372	Poecilia_reticulata
ENSAMEG00000019685	LIG4	99	88.804	ENSPPYG00000005540	LIG4	100	88.804	Pongo_abelii
ENSAMEG00000019685	LIG4	99	88.804	ENSPVAG00000016403	LIG4	100	88.804	Pteropus_vampyrus
ENSAMEG00000019685	LIG4	99	64.262	ENSPNYG00000009660	lig4	99	64.262	Pundamilia_nyererei
ENSAMEG00000019685	LIG4	99	63.417	ENSPNAG00000028069	LIG4	100	63.746	Pygocentrus_nattereri
ENSAMEG00000019685	LIG4	99	63.417	ENSPNAG00000028056	lig4	100	63.746	Pygocentrus_nattereri
ENSAMEG00000019685	LIG4	99	82.876	ENSRNOG00000014605	Lig4	100	82.876	Rattus_norvegicus
ENSAMEG00000019685	LIG4	99	87.377	ENSRBIG00000039962	LIG4	100	87.377	Rhinopithecus_bieti
ENSAMEG00000019685	LIG4	99	88.255	ENSRROG00000006040	LIG4	100	88.255	Rhinopithecus_roxellana
ENSAMEG00000019685	LIG4	99	87.596	ENSSBOG00000019029	LIG4	100	87.596	Saimiri_boliviensis_boliviensis
ENSAMEG00000019685	LIG4	99	79.057	ENSSHAG00000009525	LIG4	100	79.057	Sarcophilus_harrisii
ENSAMEG00000019685	LIG4	99	64.673	ENSSFOG00015012835	lig4	99	64.673	Scleropages_formosus
ENSAMEG00000019685	LIG4	99	62.611	ENSSMAG00000011267	lig4	99	62.611	Scophthalmus_maximus
ENSAMEG00000019685	LIG4	98	64.856	ENSSDUG00000010343	lig4	98	64.856	Seriola_dumerili
ENSAMEG00000019685	LIG4	99	62.951	ENSSLDG00000003239	lig4	99	62.951	Seriola_lalandi_dorsalis
ENSAMEG00000019685	LIG4	99	82.166	ENSSARG00000006573	LIG4	100	82.166	Sorex_araneus
ENSAMEG00000019685	LIG4	92	75.000	ENSSPUG00000002444	LIG4	100	75.000	Sphenodon_punctatus
ENSAMEG00000019685	LIG4	99	64.602	ENSSPAG00000001609	lig4	99	64.602	Stegastes_partitus
ENSAMEG00000019685	LIG4	99	87.816	ENSSSCG00000009540	LIG4	100	87.816	Sus_scrofa
ENSAMEG00000019685	LIG4	99	72.979	ENSTGUG00000010795	LIG4	99	72.979	Taeniopygia_guttata
ENSAMEG00000019685	LIG4	99	63.706	ENSTRUG00000009984	lig4	99	63.706	Takifugu_rubripes
ENSAMEG00000019685	LIG4	99	64.673	ENSTNIG00000010348	lig4	99	64.895	Tetraodon_nigroviridis
ENSAMEG00000019685	LIG4	99	87.706	ENSTBEG00000017741	LIG4	100	87.706	Tupaia_belangeri
ENSAMEG00000019685	LIG4	99	89.133	ENSTTRG00000012660	LIG4	100	89.133	Tursiops_truncatus
ENSAMEG00000019685	LIG4	99	98.134	ENSUAMG00000003773	LIG4	100	98.134	Ursus_americanus
ENSAMEG00000019685	LIG4	99	70.210	ENSXETG00000002654	lig4	99	70.210	Xenopus_tropicalis
ENSAMEG00000019685	LIG4	98	64.294	ENSXCOG00000017401	lig4	99	63.956	Xiphophorus_couchianus
ENSAMEG00000019685	LIG4	98	64.889	ENSXMAG00000015142	lig4	99	64.544	Xiphophorus_maculatus