EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000019854 (Gene tree)
Gene ID: 100465179
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 372 bases
Position: chrGL193227.1:67140-67511
Accession: 100465179
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000020910	LSM	PF01423.22	3.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000021679	LSM10-201	372	-	ENSAMEP00000020910	123 (aa)	XP_019661438	D2HRM9

Gene Model

Click here to download ENSAMEG00000019854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000019854's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000019854	LSM10	55	30.000	ENSAMEG00000006483	LSM2	74	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000019854	LSM10	100	89.431	ENSG00000181817	LSM10	100	89.431	Homo_sapiens
ENSAMEG00000019854	LSM10	94	67.241	ENSACIG00000015420	oscp1a	77	67.241	Amphilophus_citrinellus
ENSAMEG00000019854	LSM10	95	64.103	ENSAOCG00000015607	LSM10	91	64.103	Amphiprion_ocellaris
ENSAMEG00000019854	LSM10	96	69.492	ENSAOCG00000014654	-	98	69.492	Amphiprion_ocellaris
ENSAMEG00000019854	LSM10	96	69.492	ENSAOCG00000015618	LSM10	98	69.492	Amphiprion_ocellaris
ENSAMEG00000019854	LSM10	95	64.103	ENSAPEG00000021851	LSM10	91	64.103	Amphiprion_percula
ENSAMEG00000019854	LSM10	96	69.492	ENSAPEG00000021845	-	98	69.492	Amphiprion_percula
ENSAMEG00000019854	LSM10	94	62.931	ENSATEG00000006310	oscp1a	86	62.931	Anabas_testudineus
ENSAMEG00000019854	LSM10	100	67.480	ENSACAG00000001231	LSM10	100	67.480	Anolis_carolinensis
ENSAMEG00000019854	LSM10	100	90.244	ENSANAG00000018759	-	100	90.244	Aotus_nancymaae
ENSAMEG00000019854	LSM10	98	90.000	ENSANAG00000031489	-	98	90.000	Aotus_nancymaae
ENSAMEG00000019854	LSM10	96	67.797	ENSACLG00000004728	oscp1a	96	67.797	Astatotilapia_calliptera
ENSAMEG00000019854	LSM10	96	67.797	ENSAMXG00000025301	oscp1a	98	67.797	Astyanax_mexicanus
ENSAMEG00000019854	LSM10	98	93.333	ENSBTAG00000024096	LSM10	98	93.333	Bos_taurus
ENSAMEG00000019854	LSM10	100	89.431	ENSCJAG00000044880	LSM10	100	89.431	Callithrix_jacchus
ENSAMEG00000019854	LSM10	100	96.748	ENSCAFG00000003382	LSM10	100	96.748	Canis_familiaris
ENSAMEG00000019854	LSM10	100	96.748	ENSCAFG00020008920	LSM10	100	96.748	Canis_lupus_dingo
ENSAMEG00000019854	LSM10	98	93.333	ENSCHIG00000009398	LSM10	98	93.333	Capra_hircus
ENSAMEG00000019854	LSM10	100	91.870	ENSCAPG00000012567	LSM10	100	91.870	Cavia_aperea
ENSAMEG00000019854	LSM10	100	91.870	ENSCPOG00000039302	LSM10	100	91.870	Cavia_porcellus
ENSAMEG00000019854	LSM10	100	90.244	ENSCCAG00000018913	-	100	90.244	Cebus_capucinus
ENSAMEG00000019854	LSM10	98	90.000	ENSCCAG00000008378	-	98	90.000	Cebus_capucinus
ENSAMEG00000019854	LSM10	100	90.244	ENSCATG00000006589	LSM10	100	90.244	Cercocebus_atys
ENSAMEG00000019854	LSM10	100	94.309	ENSCLAG00000008633	LSM10	100	94.309	Chinchilla_lanigera
ENSAMEG00000019854	LSM10	100	90.244	ENSCSAG00000000134	LSM10	100	90.244	Chlorocebus_sabaeus
ENSAMEG00000019854	LSM10	100	89.600	ENSCHOG00000008615	LSM10	100	89.600	Choloepus_hoffmanni
ENSAMEG00000019854	LSM10	83	30.392	ENSCSAVG00000001896	-	87	30.392	Ciona_savignyi
ENSAMEG00000019854	LSM10	100	90.244	ENSCANG00000019928	LSM10	100	90.244	Colobus_angolensis_palliatus
ENSAMEG00000019854	LSM10	98	91.736	ENSCGRG00001004317	-	99	91.736	Cricetulus_griseus_chok1gshd
ENSAMEG00000019854	LSM10	93	82.051	ENSCGRG00001022673	-	94	82.051	Cricetulus_griseus_chok1gshd
ENSAMEG00000019854	LSM10	93	82.051	ENSCGRG00000015514	-	94	82.051	Cricetulus_griseus_crigri
ENSAMEG00000019854	LSM10	98	91.736	ENSCGRG00000014935	-	99	91.736	Cricetulus_griseus_crigri
ENSAMEG00000019854	LSM10	96	65.254	ENSCSEG00000010374	oscp1a	79	65.254	Cynoglossus_semilaevis
ENSAMEG00000019854	LSM10	97	64.706	ENSCVAG00000001536	oscp1a	90	64.706	Cyprinodon_variegatus
ENSAMEG00000019854	LSM10	69	72.941	ENSDARG00000109563	CABZ01074453.1	99	72.941	Danio_rerio
ENSAMEG00000019854	LSM10	98	72.727	ENSDARG00000101222	oscp1a	100	72.727	Danio_rerio
ENSAMEG00000019854	LSM10	99	93.443	ENSDNOG00000036662	LSM10	99	93.443	Dasypus_novemcinctus
ENSAMEG00000019854	LSM10	100	91.870	ENSDORG00000007579	Lsm10	100	91.870	Dipodomys_ordii
ENSAMEG00000019854	LSM10	100	91.057	ENSETEG00000005703	LSM10	100	91.057	Echinops_telfairi
ENSAMEG00000019854	LSM10	95	52.991	ENSEBUG00000001312	oscp1a	96	52.991	Eptatretus_burgeri
ENSAMEG00000019854	LSM10	100	96.748	ENSEASG00005012194	LSM10	100	96.748	Equus_asinus_asinus
ENSAMEG00000019854	LSM10	100	95.935	ENSECAG00000005071	LSM10	100	95.935	Equus_caballus
ENSAMEG00000019854	LSM10	100	91.057	ENSEEUG00000012032	LSM10	100	91.057	Erinaceus_europaeus
ENSAMEG00000019854	LSM10	98	69.421	ENSELUG00000007452	oscp1a	99	69.421	Esox_lucius
ENSAMEG00000019854	LSM10	100	69.919	ENSFALG00000000851	LSM10	100	69.919	Ficedula_albicollis
ENSAMEG00000019854	LSM10	100	92.683	ENSFDAG00000021056	LSM10	100	92.683	Fukomys_damarensis
ENSAMEG00000019854	LSM10	89	68.182	ENSFHEG00000001058	oscp1a	95	68.182	Fundulus_heteroclitus
ENSAMEG00000019854	LSM10	91	63.717	ENSGMOG00000019832	oscp1a	95	63.717	Gadus_morhua
ENSAMEG00000019854	LSM10	100	73.984	ENSGALG00000002127	LSM10	100	73.984	Gallus_gallus
ENSAMEG00000019854	LSM10	91	60.870	ENSGAFG00000016445	oscp1a	93	60.870	Gambusia_affinis
ENSAMEG00000019854	LSM10	96	64.407	ENSGACG00000002329	oscp1a	97	64.407	Gasterosteus_aculeatus
ENSAMEG00000019854	LSM10	100	72.358	ENSGAGG00000024848	LSM10	100	72.358	Gopherus_agassizii
ENSAMEG00000019854	LSM10	100	91.057	ENSGGOG00000003556	LSM10	100	91.057	Gorilla_gorilla
ENSAMEG00000019854	LSM10	96	67.797	ENSHBUG00000001722	oscp1a	96	67.797	Haplochromis_burtoni
ENSAMEG00000019854	LSM10	100	92.683	ENSHGLG00000011625	LSM10	100	92.683	Heterocephalus_glaber_female
ENSAMEG00000019854	LSM10	100	92.683	ENSHGLG00100001769	LSM10	100	92.683	Heterocephalus_glaber_male
ENSAMEG00000019854	LSM10	91	64.286	ENSIPUG00000005808	oscp1a	97	64.286	Ictalurus_punctatus
ENSAMEG00000019854	LSM10	100	95.935	ENSSTOG00000000606	LSM10	100	95.935	Ictidomys_tridecemlineatus
ENSAMEG00000019854	LSM10	98	66.942	ENSKMAG00000012143	oscp1a	99	66.942	Kryptolebias_marmoratus
ENSAMEG00000019854	LSM10	98	64.167	ENSLBEG00000017764	oscp1a	98	64.167	Labrus_bergylta
ENSAMEG00000019854	LSM10	100	74.797	ENSLACG00000015904	LSM10	95	74.797	Latimeria_chalumnae
ENSAMEG00000019854	LSM10	98	70.000	ENSLOCG00000018277	oscp1a	98	70.000	Lepisosteus_oculatus
ENSAMEG00000019854	LSM10	100	93.496	ENSLAFG00000009600	LSM10	100	93.496	Loxodonta_africana
ENSAMEG00000019854	LSM10	100	90.244	ENSMFAG00000009115	LSM10	100	90.244	Macaca_fascicularis
ENSAMEG00000019854	LSM10	100	90.244	ENSMMUG00000017338	LSM10	100	90.244	Macaca_mulatta
ENSAMEG00000019854	LSM10	100	90.244	ENSMNEG00000020023	LSM10	100	90.244	Macaca_nemestrina
ENSAMEG00000019854	LSM10	100	90.244	ENSMLEG00000025150	LSM10	100	90.244	Mandrillus_leucophaeus
ENSAMEG00000019854	LSM10	98	65.833	ENSMAMG00000004427	oscp1a	98	65.833	Mastacembelus_armatus
ENSAMEG00000019854	LSM10	96	67.797	ENSMZEG00005026307	oscp1a	96	67.797	Maylandia_zebra
ENSAMEG00000019854	LSM10	100	73.171	ENSMGAG00000015707	LSM10	100	73.171	Meleagris_gallopavo
ENSAMEG00000019854	LSM10	98	89.256	ENSMAUG00000016624	Lsm10	99	89.256	Mesocricetus_auratus
ENSAMEG00000019854	LSM10	98	90.083	ENSMOCG00000021943	Lsm10	99	90.083	Microtus_ochrogaster
ENSAMEG00000019854	LSM10	95	64.957	ENSMMOG00000013597	oscp1a	87	64.957	Mola_mola
ENSAMEG00000019854	LSM10	100	83.740	ENSMODG00000023328	LSM10	100	83.740	Monodelphis_domestica
ENSAMEG00000019854	LSM10	58	60.526	ENSMALG00000012661	oscp1a	60	60.526	Monopterus_albus
ENSAMEG00000019854	LSM10	98	91.736	MGP_CAROLIEiJ_G0026467	Lsm10	100	94.624	Mus_caroli
ENSAMEG00000019854	LSM10	98	90.909	ENSMUSG00000050188	Lsm10	100	93.548	Mus_musculus
ENSAMEG00000019854	LSM10	98	90.909	MGP_PahariEiJ_G0028798	Lsm10	100	93.548	Mus_pahari
ENSAMEG00000019854	LSM10	98	90.909	MGP_SPRETEiJ_G0027446	Lsm10	100	93.548	Mus_spretus
ENSAMEG00000019854	LSM10	100	96.748	ENSMPUG00000018593	LSM10	100	96.748	Mustela_putorius_furo
ENSAMEG00000019854	LSM10	100	90.244	ENSMLUG00000023895	LSM10	100	90.244	Myotis_lucifugus
ENSAMEG00000019854	LSM10	100	92.683	ENSNGAG00000015011	Lsm10	100	92.683	Nannospalax_galili
ENSAMEG00000019854	LSM10	96	68.644	ENSNBRG00000014306	oscp1a	96	68.644	Neolamprologus_brichardi
ENSAMEG00000019854	LSM10	100	90.244	ENSNLEG00000033754	LSM10	100	90.244	Nomascus_leucogenys
ENSAMEG00000019854	LSM10	100	83.740	ENSMEUG00000006313	LSM10	100	83.740	Notamacropus_eugenii
ENSAMEG00000019854	LSM10	100	89.431	ENSOPRG00000001699	LSM10	100	89.431	Ochotona_princeps
ENSAMEG00000019854	LSM10	100	94.309	ENSODEG00000019161	LSM10	100	94.309	Octodon_degus
ENSAMEG00000019854	LSM10	96	68.644	ENSONIG00000020904	oscp1a	97	68.644	Oreochromis_niloticus
ENSAMEG00000019854	LSM10	100	78.862	ENSOANG00000002066	LSM10	100	78.862	Ornithorhynchus_anatinus
ENSAMEG00000019854	LSM10	100	88.618	ENSOCUG00000005333	LSM10	100	88.618	Oryctolagus_cuniculus
ENSAMEG00000019854	LSM10	97	65.546	ENSORLG00000009504	oscp1a	98	65.546	Oryzias_latipes
ENSAMEG00000019854	LSM10	97	65.546	ENSORLG00020016201	oscp1a	98	65.546	Oryzias_latipes_hni
ENSAMEG00000019854	LSM10	97	66.387	ENSORLG00015007794	oscp1a	98	66.387	Oryzias_latipes_hsok
ENSAMEG00000019854	LSM10	100	95.122	ENSOGAG00000002653	LSM10	100	95.122	Otolemur_garnettii
ENSAMEG00000019854	LSM10	98	93.333	ENSOARG00000009596	LSM10	98	93.333	Ovis_aries
ENSAMEG00000019854	LSM10	100	89.431	ENSPPAG00000023465	LSM10	100	89.431	Pan_paniscus
ENSAMEG00000019854	LSM10	100	94.309	ENSPPRG00000014619	LSM10	100	94.309	Panthera_pardus
ENSAMEG00000019854	LSM10	100	94.309	ENSPTIG00000004613	LSM10	100	94.309	Panthera_tigris_altaica
ENSAMEG00000019854	LSM10	100	89.431	ENSPTRG00000000539	LSM10	100	89.431	Pan_troglodytes
ENSAMEG00000019854	LSM10	100	90.244	ENSPANG00000023172	LSM10	100	90.244	Papio_anubis
ENSAMEG00000019854	LSM10	98	66.667	ENSPKIG00000003728	oscp1a	97	66.667	Paramormyrops_kingsleyae
ENSAMEG00000019854	LSM10	100	72.358	ENSPSIG00000000590	LSM10	100	72.358	Pelodiscus_sinensis
ENSAMEG00000019854	LSM10	62	64.474	ENSPMGG00000015718	oscp1a	99	64.474	Periophthalmus_magnuspinnatus
ENSAMEG00000019854	LSM10	84	84.466	ENSPCIG00000014865	LSM10	76	84.466	Phascolarctos_cinereus
ENSAMEG00000019854	LSM10	91	67.857	ENSPFOG00000020490	oscp1a	95	67.857	Poecilia_formosa
ENSAMEG00000019854	LSM10	91	67.857	ENSPLAG00000016537	oscp1a	85	67.857	Poecilia_latipinna
ENSAMEG00000019854	LSM10	88	68.519	ENSPMEG00000000174	oscp1a	94	68.519	Poecilia_mexicana
ENSAMEG00000019854	LSM10	91	66.964	ENSPREG00000009899	oscp1a	85	66.964	Poecilia_reticulata
ENSAMEG00000019854	LSM10	100	90.244	ENSPPYG00000001539	LSM10	100	90.244	Pongo_abelii
ENSAMEG00000019854	LSM10	100	90.244	ENSPCAG00000002520	LSM10	100	90.244	Procavia_capensis
ENSAMEG00000019854	LSM10	100	91.870	ENSPVAG00000008644	LSM10	100	91.870	Pteropus_vampyrus
ENSAMEG00000019854	LSM10	96	67.797	ENSPNYG00000003138	oscp1a	96	67.797	Pundamilia_nyererei
ENSAMEG00000019854	LSM10	95	66.667	ENSPNAG00000028829	oscp1a	97	66.667	Pygocentrus_nattereri
ENSAMEG00000019854	LSM10	98	91.736	ENSRNOG00000025716	Lsm10	99	91.736	Rattus_norvegicus
ENSAMEG00000019854	LSM10	100	90.244	ENSRBIG00000001561	LSM10	100	90.244	Rhinopithecus_bieti
ENSAMEG00000019854	LSM10	100	90.244	ENSRROG00000011414	LSM10	100	90.244	Rhinopithecus_roxellana
ENSAMEG00000019854	LSM10	100	90.244	ENSSBOG00000036413	-	100	90.244	Saimiri_boliviensis_boliviensis
ENSAMEG00000019854	LSM10	100	82.927	ENSSHAG00000018056	LSM10	100	82.927	Sarcophilus_harrisii
ENSAMEG00000019854	LSM10	98	67.769	ENSSFOG00015019954	lsm10	99	67.769	Scleropages_formosus
ENSAMEG00000019854	LSM10	93	66.087	ENSSMAG00000001297	oscp1a	98	66.087	Scophthalmus_maximus
ENSAMEG00000019854	LSM10	98	64.463	ENSSDUG00000007090	oscp1a	98	64.463	Seriola_dumerili
ENSAMEG00000019854	LSM10	94	65.517	ENSSLDG00000000800	oscp1a	96	65.517	Seriola_lalandi_dorsalis
ENSAMEG00000019854	LSM10	100	90.400	ENSSARG00000004211	LSM10	100	92.000	Sorex_araneus
ENSAMEG00000019854	LSM10	94	67.241	ENSSPAG00000009229	oscp1a	96	67.241	Stegastes_partitus
ENSAMEG00000019854	LSM10	100	91.870	ENSSSCG00000038916	LSM10	100	91.870	Sus_scrofa
ENSAMEG00000019854	LSM10	99	70.492	ENSTGUG00000001600	-	100	70.492	Taeniopygia_guttata
ENSAMEG00000019854	LSM10	99	70.492	ENSTGUG00000001602	-	100	70.492	Taeniopygia_guttata
ENSAMEG00000019854	LSM10	97	67.227	ENSTRUG00000010531	oscp1a	96	67.227	Takifugu_rubripes
ENSAMEG00000019854	LSM10	100	90.244	ENSTBEG00000016674	LSM10	100	90.244	Tupaia_belangeri
ENSAMEG00000019854	LSM10	100	98.374	ENSUAMG00000020265	LSM10	100	98.374	Ursus_americanus
ENSAMEG00000019854	LSM10	100	98.374	ENSUMAG00000001438	LSM10	57	98.374	Ursus_maritimus
ENSAMEG00000019854	LSM10	100	96.748	ENSVVUG00000023209	LSM10	100	96.748	Vulpes_vulpes
ENSAMEG00000019854	LSM10	100	69.919	ENSXETG00000027631	lsm10	100	69.919	Xenopus_tropicalis
ENSAMEG00000019854	LSM10	96	60.800	ENSXCOG00000018776	oscp1a	79	60.800	Xiphophorus_couchianus
ENSAMEG00000019854	LSM10	88	65.741	ENSXMAG00000019963	oscp1a	86	65.741	Xiphophorus_maculatus