EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000019953 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 53
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 1833 bases
Position: chrGL194402.1:154404-156236
Accession: 100478625
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000021007	KH_1	PF00013.29	4.7e-11	1	1
ENSAMEP00000021007	DEAD	PF00270.29	7.6e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000021776	-	1833	XM_002929909	ENSAMEP00000021007	610 (aa)	XP_002929955	G1MNQ7

Gene Model

Click here to download ENSAMEG00000019953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000019953's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000019953	-	56	33.815	ENSAMEG00000016753	EIF4A1	83	33.815
ENSAMEG00000019953	-	59	30.239	ENSAMEG00000000138	DDX25	76	30.366
ENSAMEG00000019953	-	65	34.414	ENSAMEG00000012596	DDX59	62	34.414
ENSAMEG00000019953	-	58	32.958	ENSAMEG00000006073	DDX6	71	32.958
ENSAMEG00000019953	-	72	42.506	ENSAMEG00000010601	DDX17	60	42.257
ENSAMEG00000019953	-	62	34.336	ENSAMEG00000013159	DDX52	68	34.048
ENSAMEG00000019953	-	56	33.824	ENSAMEG00000015194	EIF4A3	82	33.824
ENSAMEG00000019953	-	56	35.511	ENSAMEG00000011566	DDX49	71	35.511
ENSAMEG00000019953	-	56	30.362	ENSAMEG00000001987	DDX19A	72	30.362
ENSAMEG00000019953	-	58	30.447	ENSAMEG00000009232	DDX10	54	30.447
ENSAMEG00000019953	-	72	42.377	ENSAMEG00000002685	DDX5	66	41.505
ENSAMEG00000019953	-	59	33.151	ENSAMEG00000000966	EIF4A2	88	32.418
ENSAMEG00000019953	-	63	40.097	ENSAMEG00000007123	DDX23	50	40.097
ENSAMEG00000019953	-	57	36.207	ENSAMEG00000010740	DDX47	75	36.207
ENSAMEG00000019953	-	60	30.025	ENSAMEG00000019426	DDX28	74	30.025
ENSAMEG00000019953	-	62	38.107	ENSAMEG00000018051	DDX41	62	38.107
ENSAMEG00000019953	-	64	34.761	ENSAMEG00000013627	DDX27	50	34.761
ENSAMEG00000019953	-	56	30.387	ENSAMEG00000015274	DDX55	60	30.387
ENSAMEG00000019953	-	98	70.100	ENSAMEG00000007851	-	92	70.100
ENSAMEG00000019953	-	66	38.835	ENSAMEG00000013960	DDX4	52	40.106
ENSAMEG00000019953	-	74	41.447	ENSAMEG00000017873	DDX46	53	42.893
ENSAMEG00000019953	-	58	32.172	ENSAMEG00000012626	DDX18	54	32.172
ENSAMEG00000019953	-	61	39.846	ENSAMEG00000006801	DDX3X	59	39.702

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000019953	-	99	73.563	ENSBTAG00000046635	-	97	73.790	Bos_taurus
ENSAMEG00000019953	-	67	77.340	ENSCAFG00020005312	-	88	76.961	Canis_lupus_dingo
ENSAMEG00000019953	-	98	74.037	ENSCHIG00000020582	-	94	76.379	Capra_hircus
ENSAMEG00000019953	-	98	70.413	ENSCPOG00000013960	-	91	70.413	Cavia_porcellus
ENSAMEG00000019953	-	98	70.684	ENSCLAG00000017424	-	91	70.684	Chinchilla_lanigera
ENSAMEG00000019953	-	97	76.819	ENSEASG00005001728	-	91	76.819	Equus_asinus_asinus
ENSAMEG00000019953	-	97	76.988	ENSECAG00000035665	-	95	76.988	Equus_caballus
ENSAMEG00000019953	-	97	76.650	ENSECAG00000037015	DDX53	95	76.650	Equus_caballus
ENSAMEG00000019953	-	53	81.818	ENSEEUG00000008838	-	71	81.818	Erinaceus_europaeus
ENSAMEG00000019953	-	84	67.969	ENSFDAG00000020660	-	99	67.969	Fukomys_damarensis
ENSAMEG00000019953	-	69	67.303	ENSFDAG00000018215	-	88	68.305	Fukomys_damarensis
ENSAMEG00000019953	-	99	74.627	ENSSTOG00000027719	-	79	74.916	Ictidomys_tridecemlineatus
ENSAMEG00000019953	-	99	73.267	ENSLAFG00000011531	-	95	73.913	Loxodonta_africana
ENSAMEG00000019953	-	97	87.899	ENSMPUG00000019441	-	98	87.793	Mustela_putorius_furo
ENSAMEG00000019953	-	95	70.326	ENSMLUG00000022321	-	94	69.767	Myotis_lucifugus
ENSAMEG00000019953	-	97	70.252	ENSMLUG00000022233	-	98	69.833	Myotis_lucifugus
ENSAMEG00000019953	-	97	73.898	ENSOCUG00000004437	-	94	73.244	Oryctolagus_cuniculus
ENSAMEG00000019953	-	97	71.549	ENSOGAG00000026282	-	94	71.477	Otolemur_garnettii
ENSAMEG00000019953	-	95	76.644	ENSOARG00000016525	-	95	76.684	Ovis_aries
ENSAMEG00000019953	-	96	83.219	ENSPPRG00000011327	-	90	82.852	Panthera_pardus
ENSAMEG00000019953	-	96	83.048	ENSPTIG00000001243	-	90	82.683	Panthera_tigris_altaica
ENSAMEG00000019953	-	97	77.311	ENSPVAG00000001484	-	95	76.962	Pteropus_vampyrus
ENSAMEG00000019953	-	98	79.132	ENSSSCG00000012169	-	95	79.132	Sus_scrofa
ENSAMEG00000019953	-	58	52.422	ENSTBEG00000001513	-	88	52.326	Tupaia_belangeri
ENSAMEG00000019953	-	98	72.788	ENSTBEG00000014650	-	94	72.788	Tupaia_belangeri
ENSAMEG00000019953	-	99	67.810	ENSTTRG00000016514	-	95	68.280	Tursiops_truncatus
ENSAMEG00000019953	-	98	92.965	ENSUAMG00000000177	-	94	92.965	Ursus_americanus
ENSAMEG00000019953	-	61	91.957	ENSUMAG00000011448	-	84	91.957	Ursus_maritimus
ENSAMEG00000019953	-	99	78.583	ENSVPAG00000007860	-	95	78.667	Vicugna_pacos
ENSAMEG00000019953	-	98	83.195	ENSVVUG00000012789	-	97	83.445	Vulpes_vulpes