EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000000297 (Gene tree)
Gene ID: 103037257
Gene Symbol: -
Alias: -
Full Name: hyaluronan binding protein 4
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 28112 bases
Position: chr14:135787-163898
Accession: 103037257
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000042074	HABP4_PAI-RBP1	PF04774.15	1e-28	1	1
ENSAMXP00000000304	HABP4_PAI-RBP1	PF04774.15	1.4e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000000304	-	1608	-	ENSAMXP00000000304	452 (aa)	-	W5JY94
ENSAMXT00000038790	-	4796	XM_007240859	ENSAMXP00000042074	382 (aa)	XP_007240921	UPI000BBDA033

Gene Model

Click here to download ENSAMXG00000000297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000000297's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000000297	-	54	50.000	ENSAMXG00000011483	serbp1a	52	47.368

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000000297	-	96	45.383	ENSAPOG00000018926	-	99	45.430	Acanthochromis_polyacanthus
ENSAMXG00000000297	-	96	45.312	ENSAOCG00000011621	-	99	44.709	Amphiprion_ocellaris
ENSAMXG00000000297	-	96	45.052	ENSAPEG00000006355	-	99	45.013	Amphiprion_percula
ENSAMXG00000000297	-	96	43.041	ENSCSEG00000017753	-	99	43.158	Cynoglossus_semilaevis
ENSAMXG00000000297	-	85	40.541	ENSGAFG00000012163	-	88	40.181	Gambusia_affinis
ENSAMXG00000000297	-	96	40.885	ENSMAMG00000020735	-	97	41.555	Mastacembelus_armatus
ENSAMXG00000000297	-	99	38.369	ENSMODG00000000514	-	99	37.947	Monodelphis_domestica
ENSAMXG00000000297	-	96	37.366	ENSPMGG00000017136	-	73	50.746	Periophthalmus_magnuspinnatus
ENSAMXG00000000297	-	96	42.318	ENSSMAG00000003212	-	99	43.045	Scophthalmus_maximus
ENSAMXG00000000297	-	96	42.895	ENSSDUG00000002625	-	99	43.501	Seriola_dumerili
ENSAMXG00000000297	-	55	50.691	ENSSLDG00000019167	-	80	50.000	Seriola_lalandi_dorsalis
ENSAMXG00000000297	-	96	42.588	ENSSPAG00000009182	-	99	42.063	Stegastes_partitus
ENSAMXG00000000297	-	96	42.593	ENSTRUG00000015277	IHABP	99	43.684	Takifugu_rubripes
ENSAMXG00000000297	-	95	43.415	ENSTTRG00000005786	-	99	39.671	Tursiops_truncatus