EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000000379 (Gene tree)
Gene ID: 103034378
Gene Symbol: arid4a
Alias: fc43f03|fi11g07|fi14h03|wu:fc43f03|wu:fi06c05|wu:fi11g07|wu:fi14h03|zgc:110391
Full Name: AT-rich interaction domain 4A
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 27731 bases
Position: chr9:23875458-23903188
Accession: 103034378
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000000419	Tudor-knot	PF11717.8	2.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000000419	-	9103	XM_007251914	ENSAMXP00000000419	1371 (aa)	XP_007251976	W5JYK9

Gene Model

Click here to download ENSAMXG00000000379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000000379's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000000379	arid4a	50	57.746	ENSAMXG00000003657	tomm20a	54	58.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000000379	arid4a	90	70.600	ENSG00000032219	ARID4A	100	83.333	Homo_sapiens
ENSAMXG00000000379	arid4a	93	62.225	ENSAPOG00000018856	arid4a	71	69.028	Acanthochromis_polyacanthus
ENSAMXG00000000379	arid4a	97	49.344	ENSACIG00000021943	-	94	66.390	Amphilophus_citrinellus
ENSAMXG00000000379	arid4a	93	64.396	ENSATEG00000014386	arid4a	69	68.273	Anabas_testudineus
ENSAMXG00000000379	arid4a	59	70.807	ENSANAG00000037559	ARID4A	63	69.917	Aotus_nancymaae
ENSAMXG00000000379	arid4a	87	59.657	ENSACLG00000005837	arid4a	84	62.963	Astatotilapia_calliptera
ENSAMXG00000000379	arid4a	90	70.455	ENSBTAG00000018898	ARID4A	62	69.151	Bos_taurus
ENSAMXG00000000379	arid4a	59	70.661	ENSCJAG00000018764	ARID4A	63	69.917	Callithrix_jacchus
ENSAMXG00000000379	arid4a	98	51.036	ENSCAFG00020008690	ARID4A	64	67.423	Canis_lupus_dingo
ENSAMXG00000000379	arid4a	90	69.502	ENSTSYG00000013397	ARID4A	62	69.023	Carlito_syrichta
ENSAMXG00000000379	arid4a	55	67.227	ENSCCAG00000019639	ARID4A	59	66.667	Cebus_capucinus
ENSAMXG00000000379	arid4a	90	70.186	ENSCATG00000041635	ARID4A	65	69.151	Cercocebus_atys
ENSAMXG00000000379	arid4a	75	49.244	ENSCSAG00000014425	ARID4A	51	69.444	Chlorocebus_sabaeus
ENSAMXG00000000379	arid4a	98	51.381	ENSCANG00000034778	ARID4A	63	69.087	Colobus_angolensis_palliatus
ENSAMXG00000000379	arid4a	90	68.542	ENSCGRG00001018168	Arid4a	63	67.708	Cricetulus_griseus_chok1gshd
ENSAMXG00000000379	arid4a	87	68.476	ENSCGRG00000005293	Arid4a	59	68.267	Cricetulus_griseus_crigri
ENSAMXG00000000379	arid4a	99	69.458	ENSDARG00000043873	arid4a	73	77.301	Danio_rerio
ENSAMXG00000000379	arid4a	90	69.665	ENSDNOG00000004090	ARID4A	65	69.102	Dasypus_novemcinctus
ENSAMXG00000000379	arid4a	82	68.207	ENSETEG00000014494	ARID4A	77	68.207	Echinops_telfairi
ENSAMXG00000000379	arid4a	79	57.229	ENSEEUG00000001510	ARID4A	63	60.870	Erinaceus_europaeus
ENSAMXG00000000379	arid4a	96	61.874	ENSELUG00000003087	arid4a	100	61.566	Esox_lucius
ENSAMXG00000000379	arid4a	77	62.762	ENSFCAG00000019223	ARID4A	65	69.772	Felis_catus
ENSAMXG00000000379	arid4a	63	66.310	ENSFDAG00000005958	-	63	67.220	Fukomys_damarensis
ENSAMXG00000000379	arid4a	95	59.729	ENSFHEG00000004741	arid4a	70	66.061	Fundulus_heteroclitus
ENSAMXG00000000379	arid4a	98	50.181	ENSGACG00000004018	arid4a	92	75.300	Gasterosteus_aculeatus
ENSAMXG00000000379	arid4a	90	70.600	ENSGGOG00000027092	ARID4A	63	69.565	Gorilla_gorilla
ENSAMXG00000000379	arid4a	64	66.845	ENSJJAG00000016742	Arid4a	55	69.602	Jaculus_jaculus
ENSAMXG00000000379	arid4a	94	58.094	ENSKMAG00000018271	arid4a	72	65.070	Kryptolebias_marmoratus
ENSAMXG00000000379	arid4a	56	44.557	ENSLAFG00000008653	ARID4A	73	43.612	Loxodonta_africana
ENSAMXG00000000379	arid4a	90	70.186	ENSMFAG00000037044	ARID4A	63	69.151	Macaca_fascicularis
ENSAMXG00000000379	arid4a	90	70.186	ENSMMUG00000003514	ARID4A	63	69.151	Macaca_mulatta
ENSAMXG00000000379	arid4a	90	70.186	ENSMNEG00000037476	ARID4A	63	69.151	Macaca_nemestrina
ENSAMXG00000000379	arid4a	90	70.186	ENSMLEG00000043095	ARID4A	65	69.231	Mandrillus_leucophaeus
ENSAMXG00000000379	arid4a	74	55.556	ENSMAMG00000006769	arid4a	81	56.893	Mastacembelus_armatus
ENSAMXG00000000379	arid4a	87	59.657	ENSMZEG00005017186	arid4a	84	62.963	Maylandia_zebra
ENSAMXG00000000379	arid4a	79	65.289	ENSMAUG00000016160	Arid4a	55	64.938	Mesocricetus_auratus
ENSAMXG00000000379	arid4a	90	69.979	ENSMICG00000011761	ARID4A	65	68.958	Microcebus_murinus
ENSAMXG00000000379	arid4a	75	59.945	ENSMOCG00000010098	Arid4a	63	66.736	Microtus_ochrogaster
ENSAMXG00000000379	arid4a	84	62.441	ENSMMOG00000020283	arid4a	82	73.270	Mola_mola
ENSAMXG00000000379	arid4a	90	67.280	MGP_CAROLIEiJ_G0017824	Arid4a	71	68.333	Mus_caroli
ENSAMXG00000000379	arid4a	90	67.629	ENSMUSG00000048118	Arid4a	71	68.542	Mus_musculus
ENSAMXG00000000379	arid4a	90	68.041	MGP_PahariEiJ_G0029580	Arid4a	71	68.958	Mus_pahari
ENSAMXG00000000379	arid4a	98	50.758	MGP_SPRETEiJ_G0018669	Arid4a	71	68.750	Mus_spretus
ENSAMXG00000000379	arid4a	67	70.661	ENSMPUG00000006137	ARID4A	65	70.186	Mustela_putorius_furo
ENSAMXG00000000379	arid4a	98	50.975	ENSNLEG00000013149	ARID4A	63	69.710	Nomascus_leucogenys
ENSAMXG00000000379	arid4a	76	50.929	ENSOANG00000011836	ARID4A	50	68.496	Ornithorhynchus_anatinus
ENSAMXG00000000379	arid4a	68	70.531	ENSORLG00020001443	arid4a	86	65.904	Oryzias_latipes_hni
ENSAMXG00000000379	arid4a	90	70.600	ENSPPAG00000042713	ARID4A	63	69.565	Pan_paniscus
ENSAMXG00000000379	arid4a	77	62.272	ENSPPRG00000009142	ARID4A	65	69.772	Panthera_pardus
ENSAMXG00000000379	arid4a	77	62.272	ENSPTIG00000007597	ARID4A	65	69.917	Panthera_tigris_altaica
ENSAMXG00000000379	arid4a	90	70.600	ENSPTRG00000006393	ARID4A	63	69.565	Pan_troglodytes
ENSAMXG00000000379	arid4a	90	70.186	ENSPANG00000022390	ARID4A	65	69.151	Papio_anubis
ENSAMXG00000000379	arid4a	59	67.695	ENSPEMG00000008231	Arid4a	65	67.012	Peromyscus_maniculatus_bairdii
ENSAMXG00000000379	arid4a	90	70.807	ENSPPYG00000005857	ARID4A	63	69.772	Pongo_abelii
ENSAMXG00000000379	arid4a	50	67.914	ENSPCAG00000002099	ARID4A	53	67.914	Procavia_capensis
ENSAMXG00000000379	arid4a	90	69.979	ENSPCOG00000013924	ARID4A	63	68.958	Propithecus_coquereli
ENSAMXG00000000379	arid4a	97	51.308	ENSPVAG00000003866	ARID4A	65	68.723	Pteropus_vampyrus
ENSAMXG00000000379	arid4a	87	59.657	ENSPNYG00000009221	arid4a	83	63.374	Pundamilia_nyererei
ENSAMXG00000000379	arid4a	99	84.519	ENSPNAG00000000710	arid4a	100	83.556	Pygocentrus_nattereri
ENSAMXG00000000379	arid4a	90	66.053	ENSRNOG00000026239	Arid4a	69	41.744	Rattus_norvegicus
ENSAMXG00000000379	arid4a	90	70.041	ENSRBIG00000032944	ARID4A	63	69.295	Rhinopithecus_bieti
ENSAMXG00000000379	arid4a	90	70.393	ENSRROG00000034002	ARID4A	63	69.502	Rhinopithecus_roxellana
ENSAMXG00000000379	arid4a	59	70.747	ENSSBOG00000027453	ARID4A	63	70.332	Saimiri_boliviensis_boliviensis
ENSAMXG00000000379	arid4a	74	44.309	ENSSLDG00000022684	arid4a	88	67.081	Seriola_lalandi_dorsalis
ENSAMXG00000000379	arid4a	56	45.116	ENSSARG00000006966	ARID4A	55	44.114	Sorex_araneus
ENSAMXG00000000379	arid4a	89	55.689	ENSSPAG00000004467	arid4a	81	61.044	Stegastes_partitus
ENSAMXG00000000379	arid4a	55	60.602	ENSTGUG00000013032	-	64	69.512	Taeniopygia_guttata
ENSAMXG00000000379	arid4a	90	52.119	ENSTNIG00000002593	arid4a	58	76.399	Tetraodon_nigroviridis
ENSAMXG00000000379	arid4a	90	70.370	ENSUAMG00000007706	ARID4A	92	67.769	Ursus_americanus
ENSAMXG00000000379	arid4a	59	66.736	ENSVPAG00000003645	ARID4A	63	66.046	Vicugna_pacos
ENSAMXG00000000379	arid4a	98	50.429	ENSXETG00000011968	arid4a	73	68.399	Xenopus_tropicalis