EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000000436 (Gene tree)
Gene ID: 103027193
Gene Symbol: rnaseh2a
Alias: zgc:56307
Full Name: ribonuclease H2 subunit A
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 7184 bases
Position: chr12:5479020-5486203
Accession: 103027193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000000448	RNase_HII	PF01351.18	2.9e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000000448	-	831	XM_022674582	ENSAMXP00000000448	276 (aa)	XP_022530303	W5JYN8

Gene Model

Click here to download ENSAMXG00000000436's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000000436's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000000436	rnaseh2a	100	52.475	ENSG00000104889	RNASEH2A	100	52.475	Homo_sapiens
ENSAMXG00000000436	rnaseh2a	100	76.299	ENSAPOG00000004101	rnaseh2a	100	76.299	Acanthochromis_polyacanthus
ENSAMXG00000000436	rnaseh2a	100	53.311	ENSAMEG00000012323	RNASEH2A	100	53.311	Ailuropoda_melanoleuca
ENSAMXG00000000436	rnaseh2a	83	80.556	ENSACIG00000002658	rnaseh2a	99	80.556	Amphilophus_citrinellus
ENSAMXG00000000436	rnaseh2a	100	75.000	ENSAOCG00000009217	rnaseh2a	100	75.000	Amphiprion_ocellaris
ENSAMXG00000000436	rnaseh2a	100	75.649	ENSAPEG00000022937	rnaseh2a	100	75.649	Amphiprion_percula
ENSAMXG00000000436	rnaseh2a	100	74.675	ENSATEG00000000908	rnaseh2a	100	74.675	Anabas_testudineus
ENSAMXG00000000436	rnaseh2a	100	63.366	ENSACAG00000003338	RNASEH2A	100	63.366	Anolis_carolinensis
ENSAMXG00000000436	rnaseh2a	100	41.924	ENSANAG00000037932	RNASEH2A	100	41.924	Aotus_nancymaae
ENSAMXG00000000436	rnaseh2a	100	73.377	ENSACLG00000009169	rnaseh2a	100	73.377	Astatotilapia_calliptera
ENSAMXG00000000436	rnaseh2a	100	55.629	ENSBTAG00000009661	RNASEH2A	100	55.629	Bos_taurus
ENSAMXG00000000436	rnaseh2a	90	42.857	WBGene00004383	rnh-2	93	42.857	Caenorhabditis_elegans
ENSAMXG00000000436	rnaseh2a	100	52.318	ENSCJAG00000004873	RNASEH2A	100	52.318	Callithrix_jacchus
ENSAMXG00000000436	rnaseh2a	100	52.318	ENSCAFG00000017159	RNASEH2A	100	52.318	Canis_familiaris
ENSAMXG00000000436	rnaseh2a	100	52.318	ENSCAFG00020005190	RNASEH2A	60	52.318	Canis_lupus_dingo
ENSAMXG00000000436	rnaseh2a	100	55.921	ENSCHIG00000014460	RNASEH2A	100	55.921	Capra_hircus
ENSAMXG00000000436	rnaseh2a	100	54.636	ENSTSYG00000025418	RNASEH2A	100	54.636	Carlito_syrichta
ENSAMXG00000000436	rnaseh2a	69	52.604	ENSCAPG00000003411	RNASEH2A	99	52.604	Cavia_aperea
ENSAMXG00000000436	rnaseh2a	100	51.987	ENSCPOG00000038877	RNASEH2A	100	51.987	Cavia_porcellus
ENSAMXG00000000436	rnaseh2a	100	53.465	ENSCCAG00000030453	RNASEH2A	100	53.465	Cebus_capucinus
ENSAMXG00000000436	rnaseh2a	100	52.980	ENSCATG00000029609	RNASEH2A	100	52.980	Cercocebus_atys
ENSAMXG00000000436	rnaseh2a	100	53.311	ENSCLAG00000014930	RNASEH2A	100	53.311	Chinchilla_lanigera
ENSAMXG00000000436	rnaseh2a	100	52.980	ENSCSAG00000006567	RNASEH2A	100	52.980	Chlorocebus_sabaeus
ENSAMXG00000000436	rnaseh2a	100	64.000	ENSCPBG00000023909	RNASEH2A	100	64.000	Chrysemys_picta_bellii
ENSAMXG00000000436	rnaseh2a	99	46.801	ENSCING00000006190	-	99	46.801	Ciona_intestinalis
ENSAMXG00000000436	rnaseh2a	100	45.000	ENSCSAVG00000010904	-	100	45.000	Ciona_savignyi
ENSAMXG00000000436	rnaseh2a	100	53.268	ENSCANG00000027433	RNASEH2A	100	53.268	Colobus_angolensis_palliatus
ENSAMXG00000000436	rnaseh2a	100	53.795	ENSCGRG00001005021	Rnaseh2a	100	53.795	Cricetulus_griseus_chok1gshd
ENSAMXG00000000436	rnaseh2a	100	53.795	ENSCGRG00000016602	Rnaseh2a	100	53.795	Cricetulus_griseus_crigri
ENSAMXG00000000436	rnaseh2a	100	73.941	ENSCSEG00000009842	rnaseh2a	100	73.941	Cynoglossus_semilaevis
ENSAMXG00000000436	rnaseh2a	98	66.780	ENSCVAG00000021203	rnaseh2a	98	66.780	Cyprinodon_variegatus
ENSAMXG00000000436	rnaseh2a	100	77.850	ENSDARG00000018891	rnaseh2a	100	77.850	Danio_rerio
ENSAMXG00000000436	rnaseh2a	86	57.806	ENSDNOG00000036532	RNASEH2A	92	57.806	Dasypus_novemcinctus
ENSAMXG00000000436	rnaseh2a	100	55.776	ENSDORG00000009008	Rnaseh2a	100	55.776	Dipodomys_ordii
ENSAMXG00000000436	rnaseh2a	98	46.205	FBgn0031252	CG13690	87	46.205	Drosophila_melanogaster
ENSAMXG00000000436	rnaseh2a	68	47.887	ENSETEG00000001956	-	100	47.887	Echinops_telfairi
ENSAMXG00000000436	rnaseh2a	94	50.519	ENSEBUG00000003380	rnaseh2a	89	50.865	Eptatretus_burgeri
ENSAMXG00000000436	rnaseh2a	82	58.800	ENSEASG00005004118	RNASEH2A	90	58.800	Equus_asinus_asinus
ENSAMXG00000000436	rnaseh2a	100	53.642	ENSECAG00000007013	RNASEH2A	100	53.642	Equus_caballus
ENSAMXG00000000436	rnaseh2a	100	51.475	ENSEEUG00000008222	RNASEH2A	100	51.475	Erinaceus_europaeus
ENSAMXG00000000436	rnaseh2a	99	74.671	ENSELUG00000023079	rnaseh2a	96	69.841	Esox_lucius
ENSAMXG00000000436	rnaseh2a	100	52.649	ENSFCAG00000000474	RNASEH2A	100	52.649	Felis_catus
ENSAMXG00000000436	rnaseh2a	100	52.649	ENSFDAG00000003595	RNASEH2A	100	52.649	Fukomys_damarensis
ENSAMXG00000000436	rnaseh2a	100	72.638	ENSFHEG00000007682	rnaseh2a	100	72.638	Fundulus_heteroclitus
ENSAMXG00000000436	rnaseh2a	100	72.258	ENSGMOG00000005650	rnaseh2a	100	72.258	Gadus_morhua
ENSAMXG00000000436	rnaseh2a	100	54.276	ENSGALG00000052002	RNASEH2A	73	54.276	Gallus_gallus
ENSAMXG00000000436	rnaseh2a	100	71.987	ENSGAFG00000009624	rnaseh2a	100	71.987	Gambusia_affinis
ENSAMXG00000000436	rnaseh2a	100	72.816	ENSGACG00000016019	rnaseh2a	100	72.816	Gasterosteus_aculeatus
ENSAMXG00000000436	rnaseh2a	100	63.036	ENSGAGG00000013859	RNASEH2A	100	63.036	Gopherus_agassizii
ENSAMXG00000000436	rnaseh2a	100	52.649	ENSGGOG00000005846	RNASEH2A	100	52.649	Gorilla_gorilla
ENSAMXG00000000436	rnaseh2a	89	76.619	ENSHBUG00000005267	rnaseh2a	96	76.619	Haplochromis_burtoni
ENSAMXG00000000436	rnaseh2a	100	50.993	ENSHGLG00000018801	RNASEH2A	100	50.993	Heterocephalus_glaber_female
ENSAMXG00000000436	rnaseh2a	100	51.325	ENSHGLG00100015773	RNASEH2A	100	51.325	Heterocephalus_glaber_male
ENSAMXG00000000436	rnaseh2a	100	73.941	ENSHCOG00000016593	rnaseh2a	100	73.941	Hippocampus_comes
ENSAMXG00000000436	rnaseh2a	100	79.479	ENSIPUG00000024299	rnaseh2a	100	79.479	Ictalurus_punctatus
ENSAMXG00000000436	rnaseh2a	100	52.980	ENSSTOG00000006224	RNASEH2A	97	59.200	Ictidomys_tridecemlineatus
ENSAMXG00000000436	rnaseh2a	100	53.247	ENSJJAG00000017547	Rnaseh2a	100	53.247	Jaculus_jaculus
ENSAMXG00000000436	rnaseh2a	100	80.212	ENSKMAG00000019829	rnaseh2a	100	80.212	Kryptolebias_marmoratus
ENSAMXG00000000436	rnaseh2a	100	72.492	ENSLBEG00000020494	rnaseh2a	100	72.492	Labrus_bergylta
ENSAMXG00000000436	rnaseh2a	82	60.400	ENSLACG00000007789	RNASEH2A	97	60.400	Latimeria_chalumnae
ENSAMXG00000000436	rnaseh2a	100	73.290	ENSLOCG00000007890	rnaseh2a	99	73.290	Lepisosteus_oculatus
ENSAMXG00000000436	rnaseh2a	100	53.642	ENSLAFG00000015571	RNASEH2A	100	53.642	Loxodonta_africana
ENSAMXG00000000436	rnaseh2a	100	52.980	ENSMFAG00000002011	RNASEH2A	100	52.980	Macaca_fascicularis
ENSAMXG00000000436	rnaseh2a	100	52.980	ENSMMUG00000005690	RNASEH2A	100	52.980	Macaca_mulatta
ENSAMXG00000000436	rnaseh2a	100	52.980	ENSMNEG00000033054	RNASEH2A	100	52.980	Macaca_nemestrina
ENSAMXG00000000436	rnaseh2a	100	52.980	ENSMLEG00000043654	RNASEH2A	100	52.980	Mandrillus_leucophaeus
ENSAMXG00000000436	rnaseh2a	100	73.633	ENSMAMG00000003062	rnaseh2a	97	76.259	Mastacembelus_armatus
ENSAMXG00000000436	rnaseh2a	100	72.727	ENSMZEG00005023857	rnaseh2a	100	72.727	Maylandia_zebra
ENSAMXG00000000436	rnaseh2a	59	55.152	ENSMAUG00000021740	-	100	55.152	Mesocricetus_auratus
ENSAMXG00000000436	rnaseh2a	100	53.311	ENSMICG00000016430	RNASEH2A	100	53.311	Microcebus_murinus
ENSAMXG00000000436	rnaseh2a	100	53.465	ENSMOCG00000017408	Rnaseh2a	100	53.465	Microtus_ochrogaster
ENSAMXG00000000436	rnaseh2a	83	76.587	ENSMMOG00000008447	rnaseh2a	99	76.587	Mola_mola
ENSAMXG00000000436	rnaseh2a	100	62.701	ENSMODG00000006997	RNASEH2A	100	62.701	Monodelphis_domestica
ENSAMXG00000000436	rnaseh2a	100	73.052	ENSMALG00000021607	rnaseh2a	98	76.113	Monopterus_albus
ENSAMXG00000000436	rnaseh2a	100	36.928	MGP_CAROLIEiJ_G0031319	-	99	53.237	Mus_caroli
ENSAMXG00000000436	rnaseh2a	100	53.135	ENSMUSG00000052926	Rnaseh2a	98	58.800	Mus_musculus
ENSAMXG00000000436	rnaseh2a	100	52.667	MGP_PahariEiJ_G0022924	Rnaseh2a	98	58.800	Mus_pahari
ENSAMXG00000000436	rnaseh2a	100	54.455	MGP_SPRETEiJ_G0032438	Rnaseh2a	100	54.455	Mus_spretus
ENSAMXG00000000436	rnaseh2a	100	53.974	ENSMPUG00000004586	RNASEH2A	100	53.974	Mustela_putorius_furo
ENSAMXG00000000436	rnaseh2a	100	54.636	ENSMLUG00000012723	RNASEH2A	100	54.636	Myotis_lucifugus
ENSAMXG00000000436	rnaseh2a	100	52.475	ENSNGAG00000017988	Rnaseh2a	100	52.475	Nannospalax_galili
ENSAMXG00000000436	rnaseh2a	100	73.701	ENSNBRG00000018731	rnaseh2a	100	73.701	Neolamprologus_brichardi
ENSAMXG00000000436	rnaseh2a	100	52.980	ENSNLEG00000012806	RNASEH2A	100	52.980	Nomascus_leucogenys
ENSAMXG00000000436	rnaseh2a	68	67.136	ENSMEUG00000006001	RNASEH2A	100	67.136	Notamacropus_eugenii
ENSAMXG00000000436	rnaseh2a	100	44.702	ENSOPRG00000004811	RNASEH2A	100	44.702	Ochotona_princeps
ENSAMXG00000000436	rnaseh2a	100	53.642	ENSODEG00000009772	RNASEH2A	100	53.642	Octodon_degus
ENSAMXG00000000436	rnaseh2a	100	74.026	ENSONIG00000018033	rnaseh2a	99	74.026	Oreochromis_niloticus
ENSAMXG00000000436	rnaseh2a	100	58.416	ENSOANG00000009079	RNASEH2A	100	58.416	Ornithorhynchus_anatinus
ENSAMXG00000000436	rnaseh2a	100	71.987	ENSORLG00000004042	rnaseh2a	100	71.987	Oryzias_latipes
ENSAMXG00000000436	rnaseh2a	100	71.987	ENSORLG00020009483	rnaseh2a	100	71.987	Oryzias_latipes_hni
ENSAMXG00000000436	rnaseh2a	100	72.403	ENSORLG00015007548	rnaseh2a	100	72.403	Oryzias_latipes_hsok
ENSAMXG00000000436	rnaseh2a	100	72.403	ENSOMEG00000016454	rnaseh2a	100	72.403	Oryzias_melastigma
ENSAMXG00000000436	rnaseh2a	100	51.987	ENSOGAG00000012214	RNASEH2A	100	51.987	Otolemur_garnettii
ENSAMXG00000000436	rnaseh2a	100	55.298	ENSOARG00000010721	RNASEH2A	100	55.298	Ovis_aries
ENSAMXG00000000436	rnaseh2a	100	52.649	ENSPPAG00000028092	RNASEH2A	100	52.649	Pan_paniscus
ENSAMXG00000000436	rnaseh2a	100	52.649	ENSPPRG00000010585	RNASEH2A	100	52.649	Panthera_pardus
ENSAMXG00000000436	rnaseh2a	100	52.318	ENSPTIG00000013366	RNASEH2A	100	52.318	Panthera_tigris_altaica
ENSAMXG00000000436	rnaseh2a	100	52.318	ENSPTRG00000010542	RNASEH2A	100	52.318	Pan_troglodytes
ENSAMXG00000000436	rnaseh2a	100	52.980	ENSPANG00000034495	RNASEH2A	100	52.980	Papio_anubis
ENSAMXG00000000436	rnaseh2a	100	72.964	ENSPKIG00000009756	rnaseh2a	100	72.964	Paramormyrops_kingsleyae
ENSAMXG00000000436	rnaseh2a	71	68.182	ENSPSIG00000012039	RNASEH2A	100	68.182	Pelodiscus_sinensis
ENSAMXG00000000436	rnaseh2a	82	77.600	ENSPMGG00000023392	rnaseh2a	98	77.600	Periophthalmus_magnuspinnatus
ENSAMXG00000000436	rnaseh2a	100	53.135	ENSPEMG00000018009	Rnaseh2a	100	53.135	Peromyscus_maniculatus_bairdii
ENSAMXG00000000436	rnaseh2a	98	56.106	ENSPMAG00000009060	rnaseh2a	98	56.721	Petromyzon_marinus
ENSAMXG00000000436	rnaseh2a	100	62.258	ENSPCIG00000014119	RNASEH2A	100	62.258	Phascolarctos_cinereus
ENSAMXG00000000436	rnaseh2a	100	72.638	ENSPFOG00000012627	rnaseh2a	100	70.968	Poecilia_formosa
ENSAMXG00000000436	rnaseh2a	73	75.481	ENSPLAG00000018723	-	90	75.481	Poecilia_latipinna
ENSAMXG00000000436	rnaseh2a	82	77.689	ENSPLAG00000015901	rnaseh2a	98	77.689	Poecilia_latipinna
ENSAMXG00000000436	rnaseh2a	82	78.088	ENSPMEG00000000647	rnaseh2a	98	78.088	Poecilia_mexicana
ENSAMXG00000000436	rnaseh2a	73	75.962	ENSPMEG00000009032	-	93	75.962	Poecilia_mexicana
ENSAMXG00000000436	rnaseh2a	100	71.617	ENSPREG00000015015	rnaseh2a	100	71.617	Poecilia_reticulata
ENSAMXG00000000436	rnaseh2a	100	52.475	ENSPPYG00000009608	RNASEH2A	100	52.475	Pongo_abelii
ENSAMXG00000000436	rnaseh2a	100	55.298	ENSPCAG00000015319	RNASEH2A	100	55.298	Procavia_capensis
ENSAMXG00000000436	rnaseh2a	100	54.305	ENSPCOG00000003686	RNASEH2A	100	54.305	Propithecus_coquereli
ENSAMXG00000000436	rnaseh2a	100	41.391	ENSPVAG00000014703	RNASEH2A	100	41.391	Pteropus_vampyrus
ENSAMXG00000000436	rnaseh2a	100	66.774	ENSPNYG00000023986	rnaseh2a	100	66.774	Pundamilia_nyererei
ENSAMXG00000000436	rnaseh2a	100	81.433	ENSPNAG00000021017	rnaseh2a	100	81.433	Pygocentrus_nattereri
ENSAMXG00000000436	rnaseh2a	100	53.465	ENSRNOG00000003504	Rnaseh2a	100	53.465	Rattus_norvegicus
ENSAMXG00000000436	rnaseh2a	100	53.311	ENSRBIG00000023554	RNASEH2A	100	53.311	Rhinopithecus_bieti
ENSAMXG00000000436	rnaseh2a	100	53.311	ENSRROG00000043799	RNASEH2A	100	53.311	Rhinopithecus_roxellana
ENSAMXG00000000436	rnaseh2a	71	39.912	YNL072W	RNH201	73	39.912	Saccharomyces_cerevisiae
ENSAMXG00000000436	rnaseh2a	100	52.980	ENSSBOG00000033164	RNASEH2A	100	52.980	Saimiri_boliviensis_boliviensis
ENSAMXG00000000436	rnaseh2a	100	60.256	ENSSHAG00000015552	RNASEH2A	100	60.256	Sarcophilus_harrisii
ENSAMXG00000000436	rnaseh2a	100	74.593	ENSSFOG00015009692	rnaseh2a	100	74.593	Scleropages_formosus
ENSAMXG00000000436	rnaseh2a	100	73.701	ENSSMAG00000013986	rnaseh2a	100	73.701	Scophthalmus_maximus
ENSAMXG00000000436	rnaseh2a	92	75.789	ENSSDUG00000005280	rnaseh2a	98	75.789	Seriola_dumerili
ENSAMXG00000000436	rnaseh2a	100	74.026	ENSSLDG00000023766	rnaseh2a	100	74.026	Seriola_lalandi_dorsalis
ENSAMXG00000000436	rnaseh2a	100	75.000	ENSSPAG00000012769	rnaseh2a	100	75.000	Stegastes_partitus
ENSAMXG00000000436	rnaseh2a	100	53.642	ENSSSCG00000013737	RNASEH2A	100	53.642	Sus_scrofa
ENSAMXG00000000436	rnaseh2a	100	71.739	ENSTRUG00000000049	rnaseh2a	100	71.739	Takifugu_rubripes
ENSAMXG00000000436	rnaseh2a	100	70.645	ENSTNIG00000004533	rnaseh2a	99	70.645	Tetraodon_nigroviridis
ENSAMXG00000000436	rnaseh2a	68	59.155	ENSTTRG00000003592	RNASEH2A	100	59.155	Tursiops_truncatus
ENSAMXG00000000436	rnaseh2a	100	52.980	ENSUAMG00000019593	RNASEH2A	100	52.980	Ursus_americanus
ENSAMXG00000000436	rnaseh2a	75	58.621	ENSUMAG00000006254	-	73	58.621	Ursus_maritimus
ENSAMXG00000000436	rnaseh2a	99	63.123	ENSXETG00000004762	rnaseh2a	98	63.123	Xenopus_tropicalis
ENSAMXG00000000436	rnaseh2a	100	71.336	ENSXCOG00000013485	rnaseh2a	100	71.336	Xiphophorus_couchianus
ENSAMXG00000000436	rnaseh2a	100	71.661	ENSXMAG00000006953	rnaseh2a	100	71.661	Xiphophorus_maculatus