EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000000460 (Gene tree)
Gene ID: 103034537
Gene Symbol: stau2
Alias: zgc:55287
Full Name: staufen double-stranded RNA binding protein 2
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 137565 bases
Position: chr3:29190485-29328049
Accession: 103034537
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000000463	dsrm	PF00035.26	9.6e-49	1	3
ENSAMXP00000000463	dsrm	PF00035.26	9.6e-49	2	3
ENSAMXP00000000463	dsrm	PF00035.26	9.6e-49	3	3
ENSAMXP00000035476	dsrm	PF00035.26	8.1e-44	1	3
ENSAMXP00000035476	dsrm	PF00035.26	8.1e-44	2	3
ENSAMXP00000035476	dsrm	PF00035.26	8.1e-44	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000000463	-	2080	XM_007260098	ENSAMXP00000000463	674 (aa)	XP_007260160	W5JYQ3
ENSAMXT00000029979	-	1963	XM_022683929	ENSAMXP00000035476	635 (aa)	XP_022539650	UPI000BBD6397

Gene Model

Click here to download ENSAMXG00000000460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000000460's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000000460	stau2	70	44.942	ENSAMXG00000016812	stau1	98	45.703

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000000460	stau2	89	73.684	ENSG00000040341	STAU2	100	75.342	Homo_sapiens
ENSAMXG00000000460	stau2	95	78.248	ENSAPOG00000002892	stau2	99	78.852	Acanthochromis_polyacanthus
ENSAMXG00000000460	stau2	89	74.211	ENSAMEG00000001864	STAU2	100	74.386	Ailuropoda_melanoleuca
ENSAMXG00000000460	stau2	90	78.628	ENSACIG00000000839	stau2	100	79.107	Amphilophus_citrinellus
ENSAMXG00000000460	stau2	95	78.248	ENSAOCG00000013358	stau2	99	78.701	Amphiprion_ocellaris
ENSAMXG00000000460	stau2	95	78.248	ENSAPEG00000022162	stau2	99	78.701	Amphiprion_percula
ENSAMXG00000000460	stau2	95	76.471	ENSATEG00000013484	stau2	100	77.929	Anabas_testudineus
ENSAMXG00000000460	stau2	91	71.205	ENSAPLG00000005175	STAU2	100	71.205	Anas_platyrhynchos
ENSAMXG00000000460	stau2	86	69.189	ENSACAG00000012977	STAU2	95	69.189	Anolis_carolinensis
ENSAMXG00000000460	stau2	90	72.906	ENSANAG00000023588	STAU2	99	74.207	Aotus_nancymaae
ENSAMXG00000000460	stau2	95	77.644	ENSACLG00000024336	stau2	100	79.252	Astatotilapia_calliptera
ENSAMXG00000000460	stau2	90	72.742	ENSBTAG00000002076	STAU2	100	72.906	Bos_taurus
ENSAMXG00000000460	stau2	73	73.662	ENSCJAG00000009484	-	94	77.358	Callithrix_jacchus
ENSAMXG00000000460	stau2	89	73.509	ENSCJAG00000007632	STAU2	100	73.684	Callithrix_jacchus
ENSAMXG00000000460	stau2	90	72.964	ENSCAFG00000008077	STAU2	100	74.035	Canis_familiaris
ENSAMXG00000000460	stau2	90	73.235	ENSCAFG00020017809	STAU2	100	73.399	Canis_lupus_dingo
ENSAMXG00000000460	stau2	90	72.906	ENSCHIG00000012254	STAU2	100	73.071	Capra_hircus
ENSAMXG00000000460	stau2	80	66.078	ENSTSYG00000034361	-	90	75.000	Carlito_syrichta
ENSAMXG00000000460	stau2	60	81.643	ENSTSYG00000005247	-	96	81.643	Carlito_syrichta
ENSAMXG00000000460	stau2	79	61.598	ENSCAPG00000017061	-	98	61.793	Cavia_aperea
ENSAMXG00000000460	stau2	89	73.684	ENSCPOG00000015001	-	100	75.147	Cavia_porcellus
ENSAMXG00000000460	stau2	89	73.158	ENSCCAG00000035053	-	100	73.333	Cebus_capucinus
ENSAMXG00000000460	stau2	90	72.906	ENSCATG00000044825	STAU2	100	75.147	Cercocebus_atys
ENSAMXG00000000460	stau2	80	55.577	ENSCATG00000031335	-	99	54.326	Cercocebus_atys
ENSAMXG00000000460	stau2	89	73.814	ENSCLAG00000001824	STAU2	97	81.022	Chinchilla_lanigera
ENSAMXG00000000460	stau2	81	74.135	ENSCSAG00000013572	-	100	74.317	Chlorocebus_sabaeus
ENSAMXG00000000460	stau2	89	55.439	ENSCHOG00000010590	STAU2	100	55.614	Choloepus_hoffmanni
ENSAMXG00000000460	stau2	100	72.874	ENSCPBG00000006987	STAU2	100	73.314	Chrysemys_picta_bellii
ENSAMXG00000000460	stau2	80	53.906	ENSCANG00000031540	-	99	53.438	Colobus_angolensis_palliatus
ENSAMXG00000000460	stau2	61	82.126	ENSCANG00000039699	-	96	82.126	Colobus_angolensis_palliatus
ENSAMXG00000000460	stau2	89	73.158	ENSCGRG00001006522	Stau2	100	73.333	Cricetulus_griseus_chok1gshd
ENSAMXG00000000460	stau2	95	71.579	ENSCSEG00000010050	stau2	98	72.659	Cynoglossus_semilaevis
ENSAMXG00000000460	stau2	95	76.647	ENSCVAG00000009893	stau2	99	77.096	Cyprinodon_variegatus
ENSAMXG00000000460	stau2	100	84.875	ENSDARG00000026801	stau2	100	84.875	Danio_rerio
ENSAMXG00000000460	stau2	89	73.509	ENSDNOG00000039875	STAU2	100	73.684	Dasypus_novemcinctus
ENSAMXG00000000460	stau2	83	73.546	ENSDORG00000014308	Stau2	100	75.734	Dipodomys_ordii
ENSAMXG00000000460	stau2	89	67.018	ENSETEG00000009087	STAU2	100	67.193	Echinops_telfairi
ENSAMXG00000000460	stau2	68	36.569	ENSEBUG00000006591	STAU2	99	36.569	Eptatretus_burgeri
ENSAMXG00000000460	stau2	90	74.042	ENSEASG00005020174	STAU2	100	73.684	Equus_asinus_asinus
ENSAMXG00000000460	stau2	90	73.520	ENSECAG00000000260	STAU2	100	73.684	Equus_caballus
ENSAMXG00000000460	stau2	89	72.632	ENSEEUG00000015102	STAU2	100	72.807	Erinaceus_europaeus
ENSAMXG00000000460	stau2	87	78.058	ENSELUG00000006988	stau2	94	78.058	Esox_lucius
ENSAMXG00000000460	stau2	90	73.563	ENSFCAG00000004917	STAU2	100	73.727	Felis_catus
ENSAMXG00000000460	stau2	100	73.099	ENSFALG00000008552	STAU2	100	73.099	Ficedula_albicollis
ENSAMXG00000000460	stau2	80	74.755	ENSFDAG00000005157	STAU2	100	75.147	Fukomys_damarensis
ENSAMXG00000000460	stau2	55	79.202	ENSFHEG00000018386	stau2	88	79.202	Fundulus_heteroclitus
ENSAMXG00000000460	stau2	74	84.709	ENSGMOG00000005428	stau2	83	84.709	Gadus_morhua
ENSAMXG00000000460	stau2	100	73.520	ENSGALG00000031390	STAU2	100	77.176	Gallus_gallus
ENSAMXG00000000460	stau2	99	73.571	ENSGAFG00000008442	stau2	99	77.108	Gambusia_affinis
ENSAMXG00000000460	stau2	90	78.010	ENSGACG00000002757	stau2	100	78.010	Gasterosteus_aculeatus
ENSAMXG00000000460	stau2	100	73.167	ENSGAGG00000003794	STAU2	100	73.167	Gopherus_agassizii
ENSAMXG00000000460	stau2	89	73.333	ENSGGOG00000026508	STAU2	100	75.147	Gorilla_gorilla
ENSAMXG00000000460	stau2	95	77.492	ENSHBUG00000020209	stau2	100	79.252	Haplochromis_burtoni
ENSAMXG00000000460	stau2	89	73.158	ENSHGLG00000014888	STAU2	100	73.333	Heterocephalus_glaber_female
ENSAMXG00000000460	stau2	89	73.158	ENSHGLG00100005337	STAU2	100	73.333	Heterocephalus_glaber_male
ENSAMXG00000000460	stau2	94	76.772	ENSHCOG00000004724	stau2	98	76.621	Hippocampus_comes
ENSAMXG00000000460	stau2	100	75.731	ENSIPUG00000009105	stau2	100	81.043	Ictalurus_punctatus
ENSAMXG00000000460	stau2	90	73.235	ENSSTOG00000011076	STAU2	100	73.399	Ictidomys_tridecemlineatus
ENSAMXG00000000460	stau2	84	71.881	ENSJJAG00000020228	Stau2	100	75.538	Jaculus_jaculus
ENSAMXG00000000460	stau2	95	76.391	ENSKMAG00000006853	stau2	99	76.391	Kryptolebias_marmoratus
ENSAMXG00000000460	stau2	95	76.877	ENSLBEG00000014492	stau2	100	80.488	Labrus_bergylta
ENSAMXG00000000460	stau2	100	75.216	ENSLACG00000006873	STAU2	100	75.216	Latimeria_chalumnae
ENSAMXG00000000460	stau2	91	67.147	ENSLOCG00000003717	stau2	100	67.147	Lepisosteus_oculatus
ENSAMXG00000000460	stau2	89	74.035	ENSLAFG00000013327	STAU2	100	74.211	Loxodonta_africana
ENSAMXG00000000460	stau2	90	72.906	ENSMFAG00000044834	STAU2	100	75.147	Macaca_fascicularis
ENSAMXG00000000460	stau2	80	59.412	ENSMFAG00000037793	-	99	58.621	Macaca_fascicularis
ENSAMXG00000000460	stau2	89	73.333	ENSMMUG00000021588	-	100	73.509	Macaca_mulatta
ENSAMXG00000000460	stau2	74	58.985	ENSMMUG00000048014	-	97	59.197	Macaca_mulatta
ENSAMXG00000000460	stau2	83	72.233	ENSMNEG00000035325	STAU2	100	75.147	Macaca_nemestrina
ENSAMXG00000000460	stau2	77	59.959	ENSMLEG00000034013	-	97	58.798	Mandrillus_leucophaeus
ENSAMXG00000000460	stau2	91	72.079	ENSMLEG00000044427	STAU2	100	73.684	Mandrillus_leucophaeus
ENSAMXG00000000460	stau2	95	77.458	ENSMAMG00000023036	stau2	100	77.002	Mastacembelus_armatus
ENSAMXG00000000460	stau2	95	77.644	ENSMZEG00005021462	stau2	100	79.252	Maylandia_zebra
ENSAMXG00000000460	stau2	91	71.767	ENSMGAG00000011523	STAU2	100	71.767	Meleagris_gallopavo
ENSAMXG00000000460	stau2	89	64.386	ENSMAUG00000021644	Stau2	98	68.172	Mesocricetus_auratus
ENSAMXG00000000460	stau2	66	75.418	ENSMICG00000032397	-	97	75.597	Microcebus_murinus
ENSAMXG00000000460	stau2	89	73.111	ENSMICG00000002886	-	100	73.286	Microcebus_murinus
ENSAMXG00000000460	stau2	89	71.979	ENSMOCG00000001037	Stau2	100	75.258	Microtus_ochrogaster
ENSAMXG00000000460	stau2	89	78.669	ENSMMOG00000003579	stau2	100	78.669	Mola_mola
ENSAMXG00000000460	stau2	84	75.899	ENSMALG00000001524	stau2	94	76.799	Monopterus_albus
ENSAMXG00000000460	stau2	89	73.333	MGP_CAROLIEiJ_G0013967	Stau2	100	75.342	Mus_caroli
ENSAMXG00000000460	stau2	89	73.158	ENSMUSG00000025920	Stau2	100	75.342	Mus_musculus
ENSAMXG00000000460	stau2	89	73.158	MGP_PahariEiJ_G0023852	Stau2	100	75.342	Mus_pahari
ENSAMXG00000000460	stau2	89	73.158	MGP_SPRETEiJ_G0014772	Stau2	100	75.342	Mus_spretus
ENSAMXG00000000460	stau2	90	73.563	ENSMPUG00000010221	STAU2	100	73.727	Mustela_putorius_furo
ENSAMXG00000000460	stau2	80	75.686	ENSMLUG00000000592	STAU2	100	75.882	Myotis_lucifugus
ENSAMXG00000000460	stau2	89	73.333	ENSNGAG00000017873	Stau2	100	75.342	Nannospalax_galili
ENSAMXG00000000460	stau2	95	77.795	ENSNBRG00000023829	stau2	99	78.097	Neolamprologus_brichardi
ENSAMXG00000000460	stau2	75	64.756	ENSNLEG00000036286	-	99	67.918	Nomascus_leucogenys
ENSAMXG00000000460	stau2	89	73.158	ENSNLEG00000001342	STAU2	100	73.158	Nomascus_leucogenys
ENSAMXG00000000460	stau2	56	76.667	ENSMEUG00000011345	-	62	76.667	Notamacropus_eugenii
ENSAMXG00000000460	stau2	89	67.368	ENSOPRG00000008474	STAU2	100	67.544	Ochotona_princeps
ENSAMXG00000000460	stau2	89	74.035	ENSODEG00000003610	STAU2	100	75.538	Octodon_degus
ENSAMXG00000000460	stau2	92	75.498	ENSONIG00000014300	stau2	100	75.804	Oreochromis_niloticus
ENSAMXG00000000460	stau2	90	73.563	ENSOCUG00000013843	STAU2	100	73.727	Oryctolagus_cuniculus
ENSAMXG00000000460	stau2	95	76.935	ENSORLG00000007943	stau2	94	77.086	Oryzias_latipes
ENSAMXG00000000460	stau2	95	76.631	ENSORLG00020016648	stau2	98	76.783	Oryzias_latipes_hni
ENSAMXG00000000460	stau2	95	76.783	ENSORLG00015016882	stau2	100	80.146	Oryzias_latipes_hsok
ENSAMXG00000000460	stau2	95	76.958	ENSOMEG00000010542	stau2	99	76.958	Oryzias_melastigma
ENSAMXG00000000460	stau2	74	73.190	ENSOGAG00000001112	STAU2	100	73.458	Otolemur_garnettii
ENSAMXG00000000460	stau2	90	72.638	ENSOARG00000006011	STAU2	98	72.801	Ovis_aries
ENSAMXG00000000460	stau2	59	53.947	ENSPPAG00000041507	-	100	54.474	Pan_paniscus
ENSAMXG00000000460	stau2	90	72.906	ENSPPAG00000034287	STAU2	100	75.147	Pan_paniscus
ENSAMXG00000000460	stau2	89	74.211	ENSPPRG00000024814	STAU2	100	74.386	Panthera_pardus
ENSAMXG00000000460	stau2	90	73.563	ENSPTIG00000007856	STAU2	100	75.930	Panthera_tigris_altaica
ENSAMXG00000000460	stau2	75	48.125	ENSPTRG00000045302	-	99	48.333	Pan_troglodytes
ENSAMXG00000000460	stau2	89	73.509	ENSPTRG00000047797	STAU2	100	75.147	Pan_troglodytes
ENSAMXG00000000460	stau2	90	72.906	ENSPANG00000021222	STAU2	100	73.684	Papio_anubis
ENSAMXG00000000460	stau2	83	75.236	ENSPKIG00000006663	stau2	97	75.236	Paramormyrops_kingsleyae
ENSAMXG00000000460	stau2	86	74.530	ENSPSIG00000003686	STAU2	100	74.701	Pelodiscus_sinensis
ENSAMXG00000000460	stau2	83	75.559	ENSPMGG00000009011	stau2	93	75.559	Periophthalmus_magnuspinnatus
ENSAMXG00000000460	stau2	89	73.158	ENSPEMG00000012104	Stau2	100	75.147	Peromyscus_maniculatus_bairdii
ENSAMXG00000000460	stau2	88	58.416	ENSPMAG00000003826	stau2	97	58.416	Petromyzon_marinus
ENSAMXG00000000460	stau2	95	70.230	ENSPCIG00000012872	STAU2	100	68.917	Phascolarctos_cinereus
ENSAMXG00000000460	stau2	95	76.762	ENSPFOG00000013147	stau2	99	77.361	Poecilia_formosa
ENSAMXG00000000460	stau2	56	71.944	ENSPLAG00000009029	stau2	93	71.944	Poecilia_latipinna
ENSAMXG00000000460	stau2	95	76.762	ENSPMEG00000014168	stau2	99	77.361	Poecilia_mexicana
ENSAMXG00000000460	stau2	96	76.409	ENSPREG00000017795	stau2	99	77.477	Poecilia_reticulata
ENSAMXG00000000460	stau2	90	68.679	ENSPPYG00000018674	STAU2	100	68.842	Pongo_abelii
ENSAMXG00000000460	stau2	80	66.667	ENSPCAG00000004679	STAU2	100	66.732	Procavia_capensis
ENSAMXG00000000460	stau2	89	63.576	ENSPCOG00000011840	STAU2	100	63.576	Propithecus_coquereli
ENSAMXG00000000460	stau2	90	65.554	ENSPVAG00000014575	STAU2	100	65.729	Pteropus_vampyrus
ENSAMXG00000000460	stau2	95	77.644	ENSPNYG00000001132	stau2	100	79.252	Pundamilia_nyererei
ENSAMXG00000000460	stau2	100	92.593	ENSPNAG00000023606	stau2	100	93.640	Pygocentrus_nattereri
ENSAMXG00000000460	stau2	80	66.732	ENSRNOG00000042458	AABR07046707.1	99	72.500	Rattus_norvegicus
ENSAMXG00000000460	stau2	90	72.906	ENSRBIG00000034859	-	100	73.071	Rhinopithecus_bieti
ENSAMXG00000000460	stau2	55	61.905	ENSRROG00000029227	-	100	61.905	Rhinopithecus_roxellana
ENSAMXG00000000460	stau2	54	80.466	ENSRROG00000039882	-	89	80.466	Rhinopithecus_roxellana
ENSAMXG00000000460	stau2	90	72.906	ENSSBOG00000032091	STAU2	100	75.342	Saimiri_boliviensis_boliviensis
ENSAMXG00000000460	stau2	89	77.933	ENSSFOG00015012905	stau2	100	77.933	Scleropages_formosus
ENSAMXG00000000460	stau2	95	77.928	ENSSMAG00000016487	stau2	100	78.003	Scophthalmus_maximus
ENSAMXG00000000460	stau2	95	78.550	ENSSDUG00000012535	stau2	100	78.231	Seriola_dumerili
ENSAMXG00000000460	stau2	95	78.550	ENSSLDG00000007156	stau2	100	79.252	Seriola_lalandi_dorsalis
ENSAMXG00000000460	stau2	100	72.070	ENSSPUG00000018208	STAU2	100	74.949	Sphenodon_punctatus
ENSAMXG00000000460	stau2	95	78.097	ENSSPAG00000000291	stau2	99	78.701	Stegastes_partitus
ENSAMXG00000000460	stau2	90	73.565	ENSSSCG00000006179	-	100	75.734	Sus_scrofa
ENSAMXG00000000460	stau2	90	77.544	ENSTGUG00000011535	STAU2	100	77.544	Taeniopygia_guttata
ENSAMXG00000000460	stau2	84	77.496	ENSTRUG00000001905	stau2	100	77.496	Takifugu_rubripes
ENSAMXG00000000460	stau2	80	68.293	ENSTNIG00000008181	stau2	100	67.462	Tetraodon_nigroviridis
ENSAMXG00000000460	stau2	89	73.684	ENSTBEG00000016245	STAU2	100	73.860	Tupaia_belangeri
ENSAMXG00000000460	stau2	89	65.965	ENSTTRG00000009236	STAU2	100	66.140	Tursiops_truncatus
ENSAMXG00000000460	stau2	90	73.290	ENSUMAG00000018908	STAU2	99	73.904	Ursus_maritimus
ENSAMXG00000000460	stau2	89	72.982	ENSVPAG00000001523	STAU2	100	73.158	Vicugna_pacos
ENSAMXG00000000460	stau2	90	73.235	ENSVVUG00000019217	-	100	74.035	Vulpes_vulpes
ENSAMXG00000000460	stau2	100	63.492	ENSXETG00000011826	stau2	100	66.247	Xenopus_tropicalis
ENSAMXG00000000460	stau2	56	85.634	ENSXCOG00000007032	stau2	86	85.634	Xiphophorus_couchianus
ENSAMXG00000000460	stau2	95	77.410	ENSXMAG00000010426	stau2	99	78.876	Xiphophorus_maculatus