EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000000512 (Gene tree)
Gene ID: -
Gene Symbol: prdm14
Alias: fc16b12|wu:fc16b12
Full Name: PR/SET domain 14
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 5989 bases
Position: chr3:30086953-30092941
Accession: 103042843
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000000519	zf-C2H2	PF00096.26	1.3e-20	1	2
ENSAMXP00000000519	zf-C2H2	PF00096.26	1.3e-20	2	2
ENSAMXP00000000519	zf-met	PF12874.7	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000000519	-	1473	XM_022684041	ENSAMXP00000000519	490 (aa)	XP_022539762	W5JYV9

Gene Model

Click here to download ENSAMXG00000000512's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000000512's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000000512	prdm14	74	40.541	ENSAMXG00000008540	PRDM12	81	40.541
ENSAMXG00000000512	prdm14	64	33.333	ENSAMXG00000008771	PRDM15	70	32.278
ENSAMXG00000000512	prdm14	53	37.143	ENSAMXG00000031009	-	87	37.143
ENSAMXG00000000512	prdm14	52	41.830	ENSAMXG00000037760	-	98	41.830
ENSAMXG00000000512	prdm14	59	39.189	ENSAMXG00000041975	-	99	39.189
ENSAMXG00000000512	prdm14	52	35.227	ENSAMXG00000041864	prdm5	98	35.227

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000000512	prdm14	75	57.474	ENSACIG00000022698	prdm14	61	61.856	Amphilophus_citrinellus
ENSAMXG00000000512	prdm14	79	60.680	ENSACLG00000025407	prdm14	61	63.307	Astatotilapia_calliptera
ENSAMXG00000000512	prdm14	85	60.048	ENSBTAG00000000060	PRDM14	66	64.096	Bos_taurus
ENSAMXG00000000512	prdm14	85	60.238	ENSCHIG00000009297	PRDM14	66	64.021	Capra_hircus
ENSAMXG00000000512	prdm14	79	62.500	ENSTSYG00000010610	PRDM14	91	62.500	Carlito_syrichta
ENSAMXG00000000512	prdm14	79	61.436	ENSCPOG00000027176	PRDM14	73	61.436	Cavia_porcellus
ENSAMXG00000000512	prdm14	88	48.416	ENSCCAG00000026032	PRDM14	64	54.787	Cebus_capucinus
ENSAMXG00000000512	prdm14	79	60.630	ENSCLAG00000001937	PRDM14	66	60.630	Chinchilla_lanigera
ENSAMXG00000000512	prdm14	90	62.322	ENSGACG00000002829	prdm14	75	66.667	Gasterosteus_aculeatus
ENSAMXG00000000512	prdm14	90	66.287	ENSHBUG00000019660	prdm14	63	72.944	Haplochromis_burtoni
ENSAMXG00000000512	prdm14	82	69.652	ENSMZEG00005021597	prdm14	63	72.944	Maylandia_zebra
ENSAMXG00000000512	prdm14	79	72.679	ENSNBRG00000023669	prdm14	63	72.679	Neolamprologus_brichardi
ENSAMXG00000000512	prdm14	79	61.170	ENSODEG00000003245	PRDM14	67	61.170	Octodon_degus
ENSAMXG00000000512	prdm14	95	57.173	ENSOARG00000003528	PRDM14	76	64.021	Ovis_aries
ENSAMXG00000000512	prdm14	90	66.287	ENSPNYG00000001938	prdm14	63	72.944	Pundamilia_nyererei
ENSAMXG00000000512	prdm14	77	72.093	ENSSDUG00000013311	prdm14	64	72.093	Seriola_dumerili
ENSAMXG00000000512	prdm14	77	71.835	ENSSLDG00000006506	prdm14	65	71.835	Seriola_lalandi_dorsalis
ENSAMXG00000000512	prdm14	79	72.727	ENSTNIG00000008194	prdm14	99	72.727	Tetraodon_nigroviridis