EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000000733 (Gene tree)
Gene ID: 103033155
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: uncharacterized LOC103033155
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 2658 bases
Position: chrAPWO02000442.1:350826-353483
Accession: 103033155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000000750	zf-CCCH	PF00642.24	8.9e-05	1	1
ENSAMXP00000036865	zf-CCCH	PF00642.24	8.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000000750	-	1404	-	ENSAMXP00000000750	260 (aa)	-	W5JZJ0
ENSAMXT00000052181	-	1537	XM_007240775	ENSAMXP00000036865	260 (aa)	XP_007240837	UPI000BBDBFCA

Gene Model

Click here to download ENSAMXG00000000733's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000000733's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000000733	si:ch211-113e8.11	97	53.383	ENSAPOG00000010990	si:ch211-113e8.11	97	54.511	Acanthochromis_polyacanthus
ENSAMXG00000000733	si:ch211-113e8.11	63	52.761	ENSACIG00000011566	si:ch211-113e8.11	83	46.597	Amphilophus_citrinellus
ENSAMXG00000000733	si:ch211-113e8.11	97	54.167	ENSAOCG00000022156	si:ch211-113e8.11	97	54.167	Amphiprion_ocellaris
ENSAMXG00000000733	si:ch211-113e8.11	99	53.532	ENSAPEG00000018284	si:ch211-113e8.11	99	53.532	Amphiprion_percula
ENSAMXG00000000733	si:ch211-113e8.11	97	50.965	ENSATEG00000018391	si:ch211-113e8.11	97	50.752	Anabas_testudineus
ENSAMXG00000000733	si:ch211-113e8.11	97	50.570	ENSACLG00000017011	si:ch211-113e8.11	97	46.642	Astatotilapia_calliptera
ENSAMXG00000000733	si:ch211-113e8.11	97	50.388	ENSCSEG00000004538	si:ch211-113e8.11	97	50.000	Cynoglossus_semilaevis
ENSAMXG00000000733	si:ch211-113e8.11	97	48.276	ENSCVAG00000020156	si:ch211-113e8.11	97	48.077	Cyprinodon_variegatus
ENSAMXG00000000733	si:ch211-113e8.11	95	47.222	ENSDARG00000076585	si:ch211-113e8.11	97	50.000	Danio_rerio
ENSAMXG00000000733	si:ch211-113e8.11	97	52.985	ENSELUG00000001130	si:ch211-113e8.11	97	53.077	Esox_lucius
ENSAMXG00000000733	si:ch211-113e8.11	97	51.341	ENSFHEG00000007870	si:ch211-113e8.11	97	50.192	Fundulus_heteroclitus
ENSAMXG00000000733	si:ch211-113e8.11	97	49.412	ENSGAFG00000020570	si:ch211-113e8.11	97	50.000	Gambusia_affinis
ENSAMXG00000000733	si:ch211-113e8.11	97	50.385	ENSHBUG00000003552	si:ch211-113e8.11	97	44.286	Haplochromis_burtoni
ENSAMXG00000000733	si:ch211-113e8.11	97	43.922	ENSHCOG00000002041	si:ch211-113e8.11	97	43.529	Hippocampus_comes
ENSAMXG00000000733	si:ch211-113e8.11	95	57.895	ENSIPUG00000002260	si:ch211-113e8.11	93	57.490	Ictalurus_punctatus
ENSAMXG00000000733	si:ch211-113e8.11	97	47.674	ENSKMAG00000000086	si:ch211-113e8.11	97	44.043	Kryptolebias_marmoratus
ENSAMXG00000000733	si:ch211-113e8.11	97	43.956	ENSLBEG00000008353	si:ch211-113e8.11	97	42.754	Labrus_bergylta
ENSAMXG00000000733	si:ch211-113e8.11	60	43.312	ENSLACG00000004304	si:ch211-113e8.11	73	43.312	Latimeria_chalumnae
ENSAMXG00000000733	si:ch211-113e8.11	95	50.775	ENSMAMG00000019098	si:ch211-113e8.11	89	51.965	Mastacembelus_armatus
ENSAMXG00000000733	si:ch211-113e8.11	97	51.575	ENSMZEG00005023658	si:ch211-113e8.11	97	47.104	Maylandia_zebra
ENSAMXG00000000733	si:ch211-113e8.11	97	49.624	ENSMALG00000005110	si:ch211-113e8.11	97	49.416	Monopterus_albus
ENSAMXG00000000733	si:ch211-113e8.11	97	51.145	ENSNBRG00000015060	si:ch211-113e8.11	97	49.810	Neolamprologus_brichardi
ENSAMXG00000000733	si:ch211-113e8.11	97	47.490	ENSORLG00000023699	si:ch211-113e8.11	97	46.538	Oryzias_latipes
ENSAMXG00000000733	si:ch211-113e8.11	97	48.462	ENSORLG00020022094	si:ch211-113e8.11	97	47.308	Oryzias_latipes_hni
ENSAMXG00000000733	si:ch211-113e8.11	97	48.249	ENSORLG00015002588	si:ch211-113e8.11	97	47.674	Oryzias_latipes_hsok
ENSAMXG00000000733	si:ch211-113e8.11	97	51.362	ENSOMEG00000010624	si:ch211-113e8.11	97	49.805	Oryzias_melastigma
ENSAMXG00000000733	si:ch211-113e8.11	53	55.714	ENSPKIG00000023576	si:ch211-113e8.11	93	44.094	Paramormyrops_kingsleyae
ENSAMXG00000000733	si:ch211-113e8.11	96	44.961	ENSPMGG00000018547	si:ch211-113e8.11	97	46.275	Periophthalmus_magnuspinnatus
ENSAMXG00000000733	si:ch211-113e8.11	97	50.391	ENSPFOG00000007950	si:ch211-113e8.11	99	49.618	Poecilia_formosa
ENSAMXG00000000733	si:ch211-113e8.11	97	50.391	ENSPLAG00000002081	si:ch211-113e8.11	97	49.618	Poecilia_latipinna
ENSAMXG00000000733	si:ch211-113e8.11	97	50.588	ENSPMEG00000017505	si:ch211-113e8.11	97	50.980	Poecilia_mexicana
ENSAMXG00000000733	si:ch211-113e8.11	97	50.588	ENSPREG00000008530	si:ch211-113e8.11	97	49.804	Poecilia_reticulata
ENSAMXG00000000733	si:ch211-113e8.11	97	50.763	ENSPNYG00000022856	si:ch211-113e8.11	97	46.442	Pundamilia_nyererei
ENSAMXG00000000733	si:ch211-113e8.11	98	59.846	ENSPNAG00000013782	si:ch211-113e8.11	99	59.144	Pygocentrus_nattereri
ENSAMXG00000000733	si:ch211-113e8.11	95	47.809	ENSSFOG00015000959	si:ch211-113e8.11	95	47.809	Scleropages_formosus
ENSAMXG00000000733	si:ch211-113e8.11	97	45.594	ENSSMAG00000009732	si:ch211-113e8.11	97	48.828	Scophthalmus_maximus
ENSAMXG00000000733	si:ch211-113e8.11	97	46.642	ENSSDUG00000000112	si:ch211-113e8.11	97	50.000	Seriola_dumerili
ENSAMXG00000000733	si:ch211-113e8.11	97	50.000	ENSSLDG00000003287	si:ch211-113e8.11	97	50.379	Seriola_lalandi_dorsalis
ENSAMXG00000000733	si:ch211-113e8.11	97	54.962	ENSSPAG00000001375	si:ch211-113e8.11	97	54.198	Stegastes_partitus
ENSAMXG00000000733	si:ch211-113e8.11	97	45.490	ENSTRUG00000023898	si:ch211-113e8.11	97	43.893	Takifugu_rubripes
ENSAMXG00000000733	si:ch211-113e8.11	97	49.412	ENSXMAG00000024104	si:ch211-113e8.11	97	48.627	Xiphophorus_maculatus