EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000000763 (Gene tree)
Gene ID: -
Gene Symbol: rbm28
Alias: FLJ10377
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 9734 bases
Position: chr18:8910152-8919885
Accession: ZDB-GENE-040426-960
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000000792	RRM_1	PF00076.22	1.1e-20	1	2
ENSAMXP00000000792	RRM_1	PF00076.22	1.1e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000000792	-	1239	-	ENSAMXP00000000792	412 (aa)	-	W5JZN2

Gene Model

Click here to download ENSAMXG00000000763's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000000763's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000000763	rbm28	99	59.284	ENSG00000106344	RBM28	71	58.864	Homo_sapiens
ENSAMXG00000000763	rbm28	98	59.725	ENSAPOG00000015512	rbm28	58	61.573	Acanthochromis_polyacanthus
ENSAMXG00000000763	rbm28	99	58.797	ENSAMEG00000004776	RBM28	55	56.920	Ailuropoda_melanoleuca
ENSAMXG00000000763	rbm28	95	62.010	ENSACIG00000023153	rbm28	91	61.881	Amphilophus_citrinellus
ENSAMXG00000000763	rbm28	98	60.183	ENSAOCG00000000462	rbm28	58	61.036	Amphiprion_ocellaris
ENSAMXG00000000763	rbm28	98	59.954	ENSAPEG00000012996	rbm28	58	61.991	Amphiprion_percula
ENSAMXG00000000763	rbm28	99	57.237	ENSATEG00000001672	rbm28	50	68.401	Anabas_testudineus
ENSAMXG00000000763	rbm28	99	58.998	ENSANAG00000033922	RBM28	71	57.763	Aotus_nancymaae
ENSAMXG00000000763	rbm28	99	58.425	ENSACLG00000025024	rbm28	58	60.714	Astatotilapia_calliptera
ENSAMXG00000000763	rbm28	99	58.998	ENSBTAG00000017001	RBM28	71	58.409	Bos_taurus
ENSAMXG00000000763	rbm28	99	58.087	ENSCJAG00000017731	RBM28	82	56.849	Callithrix_jacchus
ENSAMXG00000000763	rbm28	99	58.691	ENSCAFG00000001667	RBM28	58	58.503	Canis_familiaris
ENSAMXG00000000763	rbm28	99	58.691	ENSCAFG00020021648	RBM28	58	58.503	Canis_lupus_dingo
ENSAMXG00000000763	rbm28	99	58.904	ENSCHIG00000014146	RBM28	58	58.124	Capra_hircus
ENSAMXG00000000763	rbm28	99	58.108	ENSTSYG00000002892	RBM28	71	57.432	Carlito_syrichta
ENSAMXG00000000763	rbm28	85	44.751	ENSCAPG00000013218	RBM28	54	43.175	Cavia_aperea
ENSAMXG00000000763	rbm28	99	59.417	ENSCPOG00000006253	RBM28	57	57.339	Cavia_porcellus
ENSAMXG00000000763	rbm28	99	58.770	ENSCCAG00000035105	RBM28	71	58.770	Cebus_capucinus
ENSAMXG00000000763	rbm28	99	59.864	ENSCATG00000040497	RBM28	70	58.864	Cercocebus_atys
ENSAMXG00000000763	rbm28	99	60.183	ENSCLAG00000003707	RBM28	60	57.175	Chinchilla_lanigera
ENSAMXG00000000763	rbm28	99	59.910	ENSCSAG00000010161	RBM28	58	58.072	Chlorocebus_sabaeus
ENSAMXG00000000763	rbm28	82	53.317	ENSCPBG00000018088	RBM28	56	72.222	Chrysemys_picta_bellii
ENSAMXG00000000763	rbm28	79	42.042	ENSCSAVG00000007149	-	97	42.042	Ciona_savignyi
ENSAMXG00000000763	rbm28	99	51.282	ENSCANG00000038397	RBM28	61	68.545	Colobus_angolensis_palliatus
ENSAMXG00000000763	rbm28	99	58.352	ENSCGRG00001021278	Rbm28	56	57.045	Cricetulus_griseus_chok1gshd
ENSAMXG00000000763	rbm28	99	58.352	ENSCGRG00000005098	Rbm28	57	57.045	Cricetulus_griseus_crigri
ENSAMXG00000000763	rbm28	99	59.911	ENSCSEG00000004212	rbm28	59	59.465	Cynoglossus_semilaevis
ENSAMXG00000000763	rbm28	99	60.899	ENSCVAG00000010493	rbm28	58	60.899	Cyprinodon_variegatus
ENSAMXG00000000763	rbm28	100	62.980	ENSDARG00000025332	rbm28	52	62.022	Danio_rerio
ENSAMXG00000000763	rbm28	99	58.014	ENSDNOG00000001124	RBM28	58	57.753	Dasypus_novemcinctus
ENSAMXG00000000763	rbm28	99	57.079	ENSDORG00000004184	Rbm28	86	57.437	Dipodomys_ordii
ENSAMXG00000000763	rbm28	95	54.087	ENSETEG00000007130	RBM28	55	53.382	Echinops_telfairi
ENSAMXG00000000763	rbm28	99	43.972	ENSEBUG00000004419	rbm28	60	43.972	Eptatretus_burgeri
ENSAMXG00000000763	rbm28	99	59.594	ENSEASG00005008528	RBM28	57	58.409	Equus_asinus_asinus
ENSAMXG00000000763	rbm28	99	59.142	ENSECAG00000007745	RBM28	57	57.500	Equus_caballus
ENSAMXG00000000763	rbm28	99	54.338	ENSEEUG00000002389	RBM28	57	53.425	Erinaceus_europaeus
ENSAMXG00000000763	rbm28	99	60.823	ENSELUG00000020602	rbm28	59	60.390	Esox_lucius
ENSAMXG00000000763	rbm28	99	60.091	ENSFCAG00000000946	RBM28	72	58.182	Felis_catus
ENSAMXG00000000763	rbm28	99	57.859	ENSFDAG00000010169	RBM28	59	56.726	Fukomys_damarensis
ENSAMXG00000000763	rbm28	99	61.520	ENSGMOG00000007091	rbm28	60	61.283	Gadus_morhua
ENSAMXG00000000763	rbm28	99	61.486	ENSGAFG00000004802	rbm28	97	61.937	Gambusia_affinis
ENSAMXG00000000763	rbm28	99	60.563	ENSGACG00000012612	rbm28	74	57.848	Gasterosteus_aculeatus
ENSAMXG00000000763	rbm28	95	47.585	ENSGAGG00000008873	RBM28	51	66.310	Gopherus_agassizii
ENSAMXG00000000763	rbm28	99	59.060	ENSGGOG00000004644	RBM28	59	58.636	Gorilla_gorilla
ENSAMXG00000000763	rbm28	89	62.312	ENSHBUG00000009611	rbm28	55	62.531	Haplochromis_burtoni
ENSAMXG00000000763	rbm28	99	58.810	ENSHGLG00000005409	RBM28	59	58.409	Heterocephalus_glaber_female
ENSAMXG00000000763	rbm28	99	58.810	ENSHGLG00100016458	RBM28	59	58.409	Heterocephalus_glaber_male
ENSAMXG00000000763	rbm28	99	54.106	ENSHCOG00000010597	rbm28	56	54.106	Hippocampus_comes
ENSAMXG00000000763	rbm28	96	60.250	ENSIPUG00000007103	rbm28	81	59.204	Ictalurus_punctatus
ENSAMXG00000000763	rbm28	99	59.039	ENSSTOG00000002169	RBM28	57	58.087	Ictidomys_tridecemlineatus
ENSAMXG00000000763	rbm28	95	58.156	ENSJJAG00000022400	Rbm28	59	55.581	Jaculus_jaculus
ENSAMXG00000000763	rbm28	99	59.864	ENSKMAG00000013348	rbm28	58	59.226	Kryptolebias_marmoratus
ENSAMXG00000000763	rbm28	99	59.226	ENSLBEG00000012998	rbm28	56	58.314	Labrus_bergylta
ENSAMXG00000000763	rbm28	99	63.288	ENSLOCG00000015541	rbm28	52	62.838	Lepisosteus_oculatus
ENSAMXG00000000763	rbm28	99	59.729	ENSLAFG00000010717	RBM28	58	58.145	Loxodonta_africana
ENSAMXG00000000763	rbm28	99	59.508	ENSMFAG00000031036	RBM28	70	59.318	Macaca_fascicularis
ENSAMXG00000000763	rbm28	99	59.508	ENSMMUG00000007250	RBM28	70	59.318	Macaca_mulatta
ENSAMXG00000000763	rbm28	99	59.508	ENSMNEG00000036970	RBM28	70	59.318	Macaca_nemestrina
ENSAMXG00000000763	rbm28	99	62.700	ENSMAMG00000008525	rbm28	58	62.471	Mastacembelus_armatus
ENSAMXG00000000763	rbm28	99	58.425	ENSMZEG00005019625	rbm28	63	60.714	Maylandia_zebra
ENSAMXG00000000763	rbm28	99	59.722	ENSMAUG00000002263	Rbm28	56	59.259	Mesocricetus_auratus
ENSAMXG00000000763	rbm28	99	57.596	ENSMICG00000000107	RBM28	60	57.240	Microcebus_murinus
ENSAMXG00000000763	rbm28	99	59.132	ENSMOCG00000014615	Rbm28	58	57.991	Microtus_ochrogaster
ENSAMXG00000000763	rbm28	99	62.836	ENSMMOG00000008600	rbm28	90	61.951	Mola_mola
ENSAMXG00000000763	rbm28	99	58.581	ENSMODG00000015151	RBM28	57	56.600	Monodelphis_domestica
ENSAMXG00000000763	rbm28	99	60.870	ENSMALG00000006419	rbm28	57	60.183	Monopterus_albus
ENSAMXG00000000763	rbm28	99	58.676	MGP_CAROLIEiJ_G0028162	Rbm28	58	57.534	Mus_caroli
ENSAMXG00000000763	rbm28	99	59.453	ENSMUSG00000029701	Rbm28	58	58.219	Mus_musculus
ENSAMXG00000000763	rbm28	99	58.447	MGP_PahariEiJ_G0021920	Rbm28	58	55.705	Mus_pahari
ENSAMXG00000000763	rbm28	99	58.998	MGP_SPRETEiJ_G0029162	Rbm28	58	57.763	Mus_spretus
ENSAMXG00000000763	rbm28	99	58.542	ENSMPUG00000006511	RBM28	58	57.631	Mustela_putorius_furo
ENSAMXG00000000763	rbm28	99	59.009	ENSMLUG00000002186	RBM28	57	58.636	Myotis_lucifugus
ENSAMXG00000000763	rbm28	99	58.756	ENSNGAG00000006480	-	59	58.756	Nannospalax_galili
ENSAMXG00000000763	rbm28	99	59.427	ENSNGAG00000017946	-	57	57.981	Nannospalax_galili
ENSAMXG00000000763	rbm28	99	59.184	ENSNLEG00000012307	RBM28	70	58.864	Nomascus_leucogenys
ENSAMXG00000000763	rbm28	99	55.324	ENSMEUG00000009611	RBM28	60	53.636	Notamacropus_eugenii
ENSAMXG00000000763	rbm28	99	56.019	ENSODEG00000003213	-	57	55.140	Octodon_degus
ENSAMXG00000000763	rbm28	85	62.842	ENSODEG00000013217	-	55	61.035	Octodon_degus
ENSAMXG00000000763	rbm28	99	60.360	ENSONIG00000014924	rbm28	58	61.573	Oreochromis_niloticus
ENSAMXG00000000763	rbm28	99	52.796	ENSOANG00000000815	-	59	50.877	Ornithorhynchus_anatinus
ENSAMXG00000000763	rbm28	99	59.545	ENSOCUG00000003009	RBM28	57	59.453	Oryctolagus_cuniculus
ENSAMXG00000000763	rbm28	99	61.312	ENSORLG00000009636	rbm28	58	60.820	Oryzias_latipes
ENSAMXG00000000763	rbm28	99	61.959	ENSORLG00020002123	rbm28	61	61.731	Oryzias_latipes_hni
ENSAMXG00000000763	rbm28	99	63.615	ENSORLG00015015030	rbm28	65	62.911	Oryzias_latipes_hsok
ENSAMXG00000000763	rbm28	99	62.444	ENSOMEG00000007801	rbm28	59	61.830	Oryzias_melastigma
ENSAMXG00000000763	rbm28	99	58.087	ENSOGAG00000006011	RBM28	70	57.403	Otolemur_garnettii
ENSAMXG00000000763	rbm28	99	58.676	ENSOARG00000002547	RBM28	58	57.666	Ovis_aries
ENSAMXG00000000763	rbm28	99	59.009	ENSPPAG00000041730	RBM28	70	59.268	Pan_paniscus
ENSAMXG00000000763	rbm28	99	59.909	ENSPPRG00000004420	RBM28	72	58.314	Panthera_pardus
ENSAMXG00000000763	rbm28	99	60.407	ENSPTIG00000008550	RBM28	72	58.277	Panthera_tigris_altaica
ENSAMXG00000000763	rbm28	99	59.284	ENSPTRG00000019659	RBM28	70	58.864	Pan_troglodytes
ENSAMXG00000000763	rbm28	99	59.685	ENSPANG00000022295	RBM28	70	59.318	Papio_anubis
ENSAMXG00000000763	rbm28	99	56.432	ENSPKIG00000023453	rbm28	62	55.187	Paramormyrops_kingsleyae
ENSAMXG00000000763	rbm28	96	60.957	ENSPMGG00000012840	rbm28	58	61.209	Periophthalmus_magnuspinnatus
ENSAMXG00000000763	rbm28	98	59.302	ENSPEMG00000020673	Rbm28	60	57.078	Peromyscus_maniculatus_bairdii
ENSAMXG00000000763	rbm28	81	41.114	ENSPMAG00000002948	-	99	40.751	Petromyzon_marinus
ENSAMXG00000000763	rbm28	99	57.674	ENSPCIG00000012810	RBM28	58	57.773	Phascolarctos_cinereus
ENSAMXG00000000763	rbm28	99	61.937	ENSPFOG00000018209	rbm28	58	61.937	Poecilia_formosa
ENSAMXG00000000763	rbm28	96	62.558	ENSPLAG00000016078	rbm28	55	62.093	Poecilia_latipinna
ENSAMXG00000000763	rbm28	99	61.798	ENSPMEG00000004292	rbm28	58	61.798	Poecilia_mexicana
ENSAMXG00000000763	rbm28	97	61.982	ENSPREG00000014287	rbm28	72	61.982	Poecilia_reticulata
ENSAMXG00000000763	rbm28	99	59.060	ENSPPYG00000017975	RBM28	58	58.636	Pongo_abelii
ENSAMXG00000000763	rbm28	82	55.775	ENSPCAG00000008223	RBM28	53	52.747	Procavia_capensis
ENSAMXG00000000763	rbm28	99	58.559	ENSPCOG00000016797	RBM28	70	57.727	Propithecus_coquereli
ENSAMXG00000000763	rbm28	99	58.643	ENSPNYG00000014003	rbm28	58	60.714	Pundamilia_nyererei
ENSAMXG00000000763	rbm28	99	57.763	ENSRNOG00000005468	Rbm28	58	54.933	Rattus_norvegicus
ENSAMXG00000000763	rbm28	99	59.284	ENSRBIG00000033990	RBM28	70	59.091	Rhinopithecus_bieti
ENSAMXG00000000763	rbm28	99	59.060	ENSRROG00000040747	RBM28	70	58.864	Rhinopithecus_roxellana
ENSAMXG00000000763	rbm28	99	57.175	ENSSHAG00000017017	RBM28	60	55.862	Sarcophilus_harrisii
ENSAMXG00000000763	rbm28	98	61.593	ENSSFOG00015001231	rbm28	60	61.111	Scleropages_formosus
ENSAMXG00000000763	rbm28	99	59.666	ENSSMAG00000003885	rbm28	89	58.571	Scophthalmus_maximus
ENSAMXG00000000763	rbm28	99	60.179	ENSSDUG00000014270	rbm28	87	60.179	Seriola_dumerili
ENSAMXG00000000763	rbm28	99	59.284	ENSSLDG00000020099	rbm28	58	59.284	Seriola_lalandi_dorsalis
ENSAMXG00000000763	rbm28	85	62.162	ENSSARG00000008303	RBM28	51	61.308	Sorex_araneus
ENSAMXG00000000763	rbm28	99	55.245	ENSSPUG00000000838	RBM28	82	54.608	Sphenodon_punctatus
ENSAMXG00000000763	rbm28	99	60.407	ENSSPAG00000023305	rbm28	61	60.762	Stegastes_partitus
ENSAMXG00000000763	rbm28	99	59.491	ENSSSCG00000031847	RBM28	58	59.453	Sus_scrofa
ENSAMXG00000000763	rbm28	99	60.000	ENSTRUG00000013311	rbm28	57	59.775	Takifugu_rubripes
ENSAMXG00000000763	rbm28	99	62.727	ENSTNIG00000017962	rbm28	59	62.045	Tetraodon_nigroviridis
ENSAMXG00000000763	rbm28	99	58.542	ENSTTRG00000013647	RBM28	58	58.087	Tursiops_truncatus
ENSAMXG00000000763	rbm28	99	54.091	ENSUAMG00000006949	RBM28	60	52.822	Ursus_americanus
ENSAMXG00000000763	rbm28	99	58.352	ENSUMAG00000005997	RBM28	58	57.045	Ursus_maritimus
ENSAMXG00000000763	rbm28	99	52.982	ENSVPAG00000008304	RBM28	58	51.835	Vicugna_pacos
ENSAMXG00000000763	rbm28	99	58.465	ENSVVUG00000007270	RBM28	58	58.050	Vulpes_vulpes
ENSAMXG00000000763	rbm28	99	53.483	ENSXETG00000009271	rbm28	58	52.222	Xenopus_tropicalis
ENSAMXG00000000763	rbm28	99	59.080	ENSXCOG00000020357	rbm28	91	59.633	Xiphophorus_couchianus
ENSAMXG00000000763	rbm28	99	59.955	ENSXMAG00000004415	rbm28	59	60.407	Xiphophorus_maculatus