EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000000859 (Gene tree)
Gene ID: 103023110
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 38179 bases
Position: chr14:22412097-22450275
Accession: 103023110
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000000875	La	PF05383.17	1.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000000875	-	3105	XM_015602156	ENSAMXP00000000875	1034 (aa)	XP_015457642	W5JZW5

Gene Model

Click here to download ENSAMXG00000000859's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000000859's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000000859	larp1	70	55.277	ENSAMXG00000006805	larp1b	85	51.199

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000000859	larp1	86	70.797	ENSG00000155506	LARP1	90	79.394	Homo_sapiens
ENSAMXG00000000859	larp1	89	88.053	ENSAPOG00000020685	larp1	100	88.053	Acanthochromis_polyacanthus
ENSAMXG00000000859	larp1	86	70.829	ENSAMEG00000016673	LARP1	96	71.320	Ailuropoda_melanoleuca
ENSAMXG00000000859	larp1	99	70.293	ENSACIG00000012994	larp1	99	70.199	Amphilophus_citrinellus
ENSAMXG00000000859	larp1	76	83.824	ENSAOCG00000007792	larp1	97	83.946	Amphiprion_ocellaris
ENSAMXG00000000859	larp1	98	78.211	ENSAPEG00000022246	larp1	97	77.683	Amphiprion_percula
ENSAMXG00000000859	larp1	98	75.048	ENSATEG00000013523	larp1	99	75.000	Anabas_testudineus
ENSAMXG00000000859	larp1	83	75.423	ENSAPLG00000007559	LARP1	99	75.423	Anas_platyrhynchos
ENSAMXG00000000859	larp1	85	72.688	ENSACAG00000004071	LARP1	94	76.310	Anolis_carolinensis
ENSAMXG00000000859	larp1	86	70.690	ENSANAG00000029949	LARP1	96	68.108	Aotus_nancymaae
ENSAMXG00000000859	larp1	98	76.714	ENSACLG00000015256	larp1	96	80.359	Astatotilapia_calliptera
ENSAMXG00000000859	larp1	89	70.521	ENSBTAG00000008443	LARP1	86	70.816	Bos_taurus
ENSAMXG00000000859	larp1	89	69.958	ENSCJAG00000004454	LARP1	89	71.304	Callithrix_jacchus
ENSAMXG00000000859	larp1	86	70.905	ENSCAFG00000017639	LARP1	96	71.398	Canis_familiaris
ENSAMXG00000000859	larp1	81	72.590	ENSCAFG00020023860	LARP1	95	73.131	Canis_lupus_dingo
ENSAMXG00000000859	larp1	97	66.068	ENSCHIG00000014414	LARP1	88	68.908	Capra_hircus
ENSAMXG00000000859	larp1	85	71.647	ENSTSYG00000013732	LARP1	95	70.000	Carlito_syrichta
ENSAMXG00000000859	larp1	77	71.463	ENSCAPG00000013865	LARP1	84	71.463	Cavia_aperea
ENSAMXG00000000859	larp1	85	71.770	ENSCPOG00000003377	LARP1	96	71.553	Cavia_porcellus
ENSAMXG00000000859	larp1	89	69.854	ENSCCAG00000025201	LARP1	89	71.196	Cebus_capucinus
ENSAMXG00000000859	larp1	89	68.393	ENSCATG00000030675	LARP1	90	70.829	Cercocebus_atys
ENSAMXG00000000859	larp1	89	69.543	ENSCLAG00000012755	LARP1	96	69.335	Chinchilla_lanigera
ENSAMXG00000000859	larp1	81	70.804	ENSCSAG00000010800	LARP1	96	71.074	Chlorocebus_sabaeus
ENSAMXG00000000859	larp1	81	67.901	ENSCHOG00000012716	LARP1	88	67.901	Choloepus_hoffmanni
ENSAMXG00000000859	larp1	93	73.647	ENSCPBG00000002173	LARP1	92	73.953	Chrysemys_picta_bellii
ENSAMXG00000000859	larp1	86	71.044	ENSCANG00000037418	LARP1	90	70.829	Colobus_angolensis_palliatus
ENSAMXG00000000859	larp1	99	65.242	ENSCGRG00001016913	Larp1	89	69.302	Cricetulus_griseus_chok1gshd
ENSAMXG00000000859	larp1	85	67.728	ENSCGRG00000009916	Larp1	99	67.728	Cricetulus_griseus_crigri
ENSAMXG00000000859	larp1	98	77.926	ENSCSEG00000016431	larp1	99	76.443	Cynoglossus_semilaevis
ENSAMXG00000000859	larp1	98	76.571	ENSCVAG00000022687	larp1	96	77.948	Cyprinodon_variegatus
ENSAMXG00000000859	larp1	92	75.413	ENSDARG00000101722	larp1	96	76.335	Danio_rerio
ENSAMXG00000000859	larp1	88	70.126	ENSDNOG00000012073	LARP1	86	69.843	Dasypus_novemcinctus
ENSAMXG00000000859	larp1	85	69.435	ENSDORG00000002897	Larp1	94	69.546	Dipodomys_ordii
ENSAMXG00000000859	larp1	82	71.654	ENSETEG00000020251	LARP1	100	71.429	Echinops_telfairi
ENSAMXG00000000859	larp1	88	70.607	ENSEASG00005001070	LARP1	86	70.324	Equus_asinus_asinus
ENSAMXG00000000859	larp1	88	70.607	ENSECAG00000017002	LARP1	70	70.462	Equus_caballus
ENSAMXG00000000859	larp1	83	68.380	ENSEEUG00000001065	LARP1	96	68.785	Erinaceus_europaeus
ENSAMXG00000000859	larp1	100	76.385	ENSELUG00000019403	larp1	100	76.040	Esox_lucius
ENSAMXG00000000859	larp1	89	70.062	ENSFCAG00000000592	LARP1	90	69.518	Felis_catus
ENSAMXG00000000859	larp1	77	75.460	ENSFALG00000008335	LARP1	99	73.497	Ficedula_albicollis
ENSAMXG00000000859	larp1	85	71.661	ENSFDAG00000021125	LARP1	96	71.522	Fukomys_damarensis
ENSAMXG00000000859	larp1	64	71.108	ENSFHEG00000020307	larp1	92	76.205	Fundulus_heteroclitus
ENSAMXG00000000859	larp1	99	69.614	ENSGALG00000040109	LARP1	96	74.153	Gallus_gallus
ENSAMXG00000000859	larp1	97	70.946	ENSGAGG00000025113	LARP1	93	77.485	Gopherus_agassizii
ENSAMXG00000000859	larp1	88	69.873	ENSGGOG00000006048	LARP1	91	70.469	Gorilla_gorilla
ENSAMXG00000000859	larp1	98	77.264	ENSHBUG00000020762	larp1	96	80.892	Haplochromis_burtoni
ENSAMXG00000000859	larp1	90	69.199	ENSHGLG00000006267	LARP1	87	69.697	Heterocephalus_glaber_female
ENSAMXG00000000859	larp1	85	71.600	ENSHGLG00100014230	-	96	71.382	Heterocephalus_glaber_male
ENSAMXG00000000859	larp1	88	60.718	ENSHGLG00100003395	-	87	59.451	Heterocephalus_glaber_male
ENSAMXG00000000859	larp1	90	89.086	ENSHCOG00000010786	larp1	99	86.165	Hippocampus_comes
ENSAMXG00000000859	larp1	98	75.930	ENSIPUG00000019105	Larp1	98	77.866	Ictalurus_punctatus
ENSAMXG00000000859	larp1	85	70.276	ENSSTOG00000005678	LARP1	95	70.276	Ictidomys_tridecemlineatus
ENSAMXG00000000859	larp1	89	66.286	ENSJJAG00000016950	Larp1	89	66.423	Jaculus_jaculus
ENSAMXG00000000859	larp1	98	77.810	ENSKMAG00000018468	larp1	97	79.853	Kryptolebias_marmoratus
ENSAMXG00000000859	larp1	99	74.304	ENSLBEG00000027172	larp1	99	73.098	Labrus_bergylta
ENSAMXG00000000859	larp1	96	80.000	ENSLOCG00000012457	larp1	99	79.899	Lepisosteus_oculatus
ENSAMXG00000000859	larp1	88	69.751	ENSLAFG00000008991	LARP1	88	69.447	Loxodonta_africana
ENSAMXG00000000859	larp1	86	70.690	ENSMFAG00000031651	LARP1	90	70.721	Macaca_fascicularis
ENSAMXG00000000859	larp1	86	69.155	ENSMMUG00000009411	LARP1	96	69.408	Macaca_mulatta
ENSAMXG00000000859	larp1	82	71.904	ENSMNEG00000039294	LARP1	96	72.422	Macaca_nemestrina
ENSAMXG00000000859	larp1	86	70.905	ENSMLEG00000035142	LARP1	90	70.936	Mandrillus_leucophaeus
ENSAMXG00000000859	larp1	99	75.827	ENSMAMG00000021788	larp1	99	75.385	Mastacembelus_armatus
ENSAMXG00000000859	larp1	98	76.714	ENSMZEG00005009345	larp1	96	80.359	Maylandia_zebra
ENSAMXG00000000859	larp1	87	74.162	ENSMGAG00000005696	LARP1	98	74.162	Meleagris_gallopavo
ENSAMXG00000000859	larp1	99	65.359	ENSMAUG00000001385	Larp1	89	69.302	Mesocricetus_auratus
ENSAMXG00000000859	larp1	85	70.550	ENSMICG00000000837	LARP1	95	73.333	Microcebus_murinus
ENSAMXG00000000859	larp1	99	65.359	ENSMOCG00000008920	Larp1	89	69.199	Microtus_ochrogaster
ENSAMXG00000000859	larp1	98	58.406	ENSMMOG00000013364	larp1	97	60.915	Mola_mola
ENSAMXG00000000859	larp1	86	71.459	ENSMODG00000008663	LARP1	97	71.459	Monodelphis_domestica
ENSAMXG00000000859	larp1	99	75.340	ENSMALG00000017180	larp1	96	77.964	Monopterus_albus
ENSAMXG00000000859	larp1	97	66.318	MGP_CAROLIEiJ_G0016383	Larp1	88	70.126	Mus_caroli
ENSAMXG00000000859	larp1	97	66.413	ENSMUSG00000037331	Larp1	88	70.440	Mus_musculus
ENSAMXG00000000859	larp1	97	66.350	MGP_PahariEiJ_G0017518	Larp1	88	70.262	Mus_pahari
ENSAMXG00000000859	larp1	97	66.413	MGP_SPRETEiJ_G0017225	Larp1	88	70.440	Mus_spretus
ENSAMXG00000000859	larp1	74	68.210	ENSMPUG00000013564	LARP1	88	67.621	Mustela_putorius_furo
ENSAMXG00000000859	larp1	86	67.310	ENSMLUG00000002608	LARP1	96	67.996	Myotis_lucifugus
ENSAMXG00000000859	larp1	85	69.690	ENSNGAG00000001098	Larp1	94	69.922	Nannospalax_galili
ENSAMXG00000000859	larp1	88	82.829	ENSNBRG00000008963	larp1	95	82.903	Neolamprologus_brichardi
ENSAMXG00000000859	larp1	86	69.838	ENSNLEG00000016588	LARP1	95	69.435	Nomascus_leucogenys
ENSAMXG00000000859	larp1	86	67.179	ENSMEUG00000002957	LARP1	97	67.179	Notamacropus_eugenii
ENSAMXG00000000859	larp1	85	71.227	ENSOPRG00000013014	LARP1	96	71.010	Ochotona_princeps
ENSAMXG00000000859	larp1	87	70.170	ENSODEG00000010824	LARP1	97	70.677	Octodon_degus
ENSAMXG00000000859	larp1	98	75.537	ENSONIG00000017308	larp1	97	76.648	Oreochromis_niloticus
ENSAMXG00000000859	larp1	86	72.641	ENSOANG00000005096	LARP1	96	73.277	Ornithorhynchus_anatinus
ENSAMXG00000000859	larp1	98	65.504	ENSOCUG00000013066	LARP1	96	65.909	Oryctolagus_cuniculus
ENSAMXG00000000859	larp1	99	75.118	ENSORLG00000000824	larp1	98	81.273	Oryzias_latipes
ENSAMXG00000000859	larp1	99	75.213	ENSORLG00020022241	larp1	98	75.070	Oryzias_latipes_hni
ENSAMXG00000000859	larp1	99	73.868	ENSORLG00015007538	larp1	98	75.000	Oryzias_latipes_hsok
ENSAMXG00000000859	larp1	99	73.856	ENSOMEG00000003134	larp1	98	74.674	Oryzias_melastigma
ENSAMXG00000000859	larp1	85	71.584	ENSOGAG00000016750	LARP1	96	71.367	Otolemur_garnettii
ENSAMXG00000000859	larp1	85	70.033	ENSOARG00000009893	LARP1	96	69.598	Ovis_aries
ENSAMXG00000000859	larp1	86	70.797	ENSPPAG00000042993	LARP1	89	71.413	Pan_paniscus
ENSAMXG00000000859	larp1	86	69.280	ENSPPRG00000009780	LARP1	90	69.231	Panthera_pardus
ENSAMXG00000000859	larp1	86	69.504	ENSPTIG00000007013	LARP1	90	69.772	Panthera_tigris_altaica
ENSAMXG00000000859	larp1	89	68.288	ENSPTRG00000017447	LARP1	89	71.304	Pan_troglodytes
ENSAMXG00000000859	larp1	89	68.393	ENSPANG00000008080	LARP1	90	70.829	Papio_anubis
ENSAMXG00000000859	larp1	97	70.543	ENSPKIG00000017153	-	99	70.862	Paramormyrops_kingsleyae
ENSAMXG00000000859	larp1	100	77.757	ENSPKIG00000010096	larp1	100	78.113	Paramormyrops_kingsleyae
ENSAMXG00000000859	larp1	98	75.761	ENSPMGG00000011599	larp1	95	81.926	Periophthalmus_magnuspinnatus
ENSAMXG00000000859	larp1	87	68.290	ENSPEMG00000022523	Larp1	97	68.290	Peromyscus_maniculatus_bairdii
ENSAMXG00000000859	larp1	88	72.377	ENSPCIG00000019242	LARP1	80	72.299	Phascolarctos_cinereus
ENSAMXG00000000859	larp1	98	73.946	ENSPFOG00000005836	larp1	97	73.394	Poecilia_formosa
ENSAMXG00000000859	larp1	98	75.264	ENSPLAG00000008936	larp1	96	74.859	Poecilia_latipinna
ENSAMXG00000000859	larp1	98	74.600	ENSPMEG00000013656	larp1	97	73.303	Poecilia_mexicana
ENSAMXG00000000859	larp1	85	78.846	ENSPREG00000005726	larp1	95	79.572	Poecilia_reticulata
ENSAMXG00000000859	larp1	85	69.651	ENSPCAG00000006407	LARP1	96	69.432	Procavia_capensis
ENSAMXG00000000859	larp1	86	63.853	ENSPCOG00000016949	LARP1	96	66.921	Propithecus_coquereli
ENSAMXG00000000859	larp1	88	70.846	ENSPVAG00000002262	LARP1	86	70.637	Pteropus_vampyrus
ENSAMXG00000000859	larp1	98	76.808	ENSPNYG00000007938	larp1	96	80.465	Pundamilia_nyererei
ENSAMXG00000000859	larp1	100	87.524	ENSPNAG00000021427	larp1	100	88.580	Pygocentrus_nattereri
ENSAMXG00000000859	larp1	85	69.700	ENSRNOG00000031544	Larp1	94	69.700	Rattus_norvegicus
ENSAMXG00000000859	larp1	86	70.797	ENSRBIG00000038005	LARP1	90	70.829	Rhinopithecus_bieti
ENSAMXG00000000859	larp1	86	70.797	ENSRROG00000034073	LARP1	96	72.506	Rhinopithecus_roxellana
ENSAMXG00000000859	larp1	90	68.454	ENSSBOG00000019816	LARP1	96	69.724	Saimiri_boliviensis_boliviensis
ENSAMXG00000000859	larp1	86	72.410	ENSSHAG00000011115	LARP1	97	72.410	Sarcophilus_harrisii
ENSAMXG00000000859	larp1	98	75.728	ENSSFOG00015018058	-	97	74.783	Scleropages_formosus
ENSAMXG00000000859	larp1	89	79.089	ENSSFOG00015020304	larp1	97	76.784	Scleropages_formosus
ENSAMXG00000000859	larp1	95	76.205	ENSSMAG00000007468	larp1	98	76.598	Scophthalmus_maximus
ENSAMXG00000000859	larp1	98	76.230	ENSSDUG00000000268	larp1	95	80.357	Seriola_dumerili
ENSAMXG00000000859	larp1	80	80.238	ENSSLDG00000016505	larp1	95	80.238	Seriola_lalandi_dorsalis
ENSAMXG00000000859	larp1	54	84.836	ENSSARG00000013907	-	83	84.836	Sorex_araneus
ENSAMXG00000000859	larp1	98	68.885	ENSSPUG00000012179	-	96	69.405	Sphenodon_punctatus
ENSAMXG00000000859	larp1	99	76.802	ENSSPAG00000003910	larp1	99	76.710	Stegastes_partitus
ENSAMXG00000000859	larp1	88	70.724	ENSSSCG00000017069	LARP1	95	72.430	Sus_scrofa
ENSAMXG00000000859	larp1	85	74.370	ENSTGUG00000000704	LARP1	99	74.370	Taeniopygia_guttata
ENSAMXG00000000859	larp1	99	74.929	ENSTRUG00000009470	larp1	99	74.741	Takifugu_rubripes
ENSAMXG00000000859	larp1	83	69.765	ENSTBEG00000003381	LARP1	100	69.541	Tupaia_belangeri
ENSAMXG00000000859	larp1	85	70.820	ENSTTRG00000015934	LARP1	97	70.847	Tursiops_truncatus
ENSAMXG00000000859	larp1	88	71.025	ENSUAMG00000019334	LARP1	86	70.521	Ursus_americanus
ENSAMXG00000000859	larp1	85	70.011	ENSUMAG00000002934	LARP1	96	71.972	Ursus_maritimus
ENSAMXG00000000859	larp1	81	72.590	ENSVVUG00000004644	LARP1	95	73.131	Vulpes_vulpes
ENSAMXG00000000859	larp1	91	73.602	ENSXETG00000008413	larp1	98	68.966	Xenopus_tropicalis
ENSAMXG00000000859	larp1	85	82.011	ENSXCOG00000004022	larp1	94	82.077	Xiphophorus_couchianus
ENSAMXG00000000859	larp1	98	74.036	ENSXMAG00000018780	larp1	97	74.157	Xiphophorus_maculatus