EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000000911 (Gene tree)
Gene ID: 103032272
Gene Symbol: ddx27
Alias: cb843
Full Name: DEAD-box helicase 27
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 24330 bases
Position: chr13:27320767-27345096
Accession: 103032272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000045593	ResIII	PF04851.15	2.1e-08	1	1
ENSAMXP00000000933	ResIII	PF04851.15	8.3e-08	1	1
ENSAMXP00000045593	DEAD	PF00270.29	3.3e-46	1	1
ENSAMXP00000000933	DEAD	PF00270.29	3.5e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000000933	-	2226	-	ENSAMXP00000000933	741 (aa)	-	W5K023
ENSAMXT00000041749	-	6813	XM_022675618	ENSAMXP00000045593	770 (aa)	XP_022531339	UPI000BBDDF27

Gene Model

Click here to download ENSAMXG00000000911's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000000911's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000000911	ddx27	51	30.343	ENSAMXG00000020882	eif4a3	92	30.343
ENSAMXG00000000911	ddx27	50	33.508	ENSAMXG00000015550	DDX5	71	33.333
ENSAMXG00000000911	ddx27	50	31.536	ENSAMXG00000019553	ddx6	75	31.536
ENSAMXG00000000911	ddx27	52	31.328	ENSAMXG00000040730	eif4a1b	95	31.343
ENSAMXG00000000911	ddx27	56	31.050	ENSAMXG00000017837	ddx39b	85	32.546
ENSAMXG00000000911	ddx27	51	32.546	ENSAMXG00000035102	ddx59	56	32.546
ENSAMXG00000000911	ddx27	51	33.071	ENSAMXG00000018631	DDX39A	87	32.546
ENSAMXG00000000911	ddx27	51	33.858	ENSAMXG00000015256	-	87	33.333
ENSAMXG00000000911	ddx27	51	37.726	ENSAMXG00000016919	ddx49	80	37.726
ENSAMXG00000000911	ddx27	50	37.596	ENSAMXG00000004457	ddx43	51	37.879
ENSAMXG00000000911	ddx27	66	34.195	ENSAMXG00000024269	ddx18	58	36.792
ENSAMXG00000000911	ddx27	50	32.474	ENSAMXG00000019126	eif4a2	95	31.762
ENSAMXG00000000911	ddx27	50	33.163	ENSAMXG00000002956	DDX41	63	33.163
ENSAMXG00000000911	ddx27	52	31.078	ENSAMXG00000024377	ddx52	61	30.827
ENSAMXG00000000911	ddx27	50	30.352	ENSAMXG00000033980	-	73	30.352
ENSAMXG00000000911	ddx27	54	30.769	ENSAMXG00000030251	eif4a1a	92	31.347

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000000911	ddx27	100	72.774	ENSG00000124228	DDX27	95	77.099	Homo_sapiens
ENSAMXG00000000911	ddx27	99	71.204	ENSAPOG00000017645	ddx27	99	71.204	Acanthochromis_polyacanthus
ENSAMXG00000000911	ddx27	99	72.751	ENSAMEG00000013627	DDX27	98	71.907	Ailuropoda_melanoleuca
ENSAMXG00000000911	ddx27	98	68.861	ENSACIG00000014378	ddx27	96	83.770	Amphilophus_citrinellus
ENSAMXG00000000911	ddx27	99	70.964	ENSAOCG00000021035	ddx27	99	71.224	Amphiprion_ocellaris
ENSAMXG00000000911	ddx27	99	70.833	ENSAPEG00000022281	ddx27	99	71.094	Amphiprion_percula
ENSAMXG00000000911	ddx27	99	70.997	ENSATEG00000010093	ddx27	99	71.486	Anabas_testudineus
ENSAMXG00000000911	ddx27	95	70.777	ENSAPLG00000011377	DDX27	100	69.571	Anas_platyrhynchos
ENSAMXG00000000911	ddx27	100	72.000	ENSANAG00000036257	DDX27	99	71.097	Aotus_nancymaae
ENSAMXG00000000911	ddx27	100	72.222	ENSACLG00000014992	ddx27	100	71.705	Astatotilapia_calliptera
ENSAMXG00000000911	ddx27	100	71.871	ENSBTAG00000006671	DDX27	99	71.871	Bos_taurus
ENSAMXG00000000911	ddx27	75	50.643	WBGene00022148	ddx-27	82	50.643	Caenorhabditis_elegans
ENSAMXG00000000911	ddx27	100	71.742	ENSCJAG00000016135	DDX27	99	71.097	Callithrix_jacchus
ENSAMXG00000000911	ddx27	99	72.822	ENSCAFG00000011384	DDX27	99	71.795	Canis_familiaris
ENSAMXG00000000911	ddx27	99	72.822	ENSCAFG00020017143	DDX27	100	71.410	Canis_lupus_dingo
ENSAMXG00000000911	ddx27	100	72.258	ENSCHIG00000007753	DDX27	99	72.258	Capra_hircus
ENSAMXG00000000911	ddx27	100	72.000	ENSTSYG00000030362	DDX27	99	70.968	Carlito_syrichta
ENSAMXG00000000911	ddx27	96	74.194	ENSCAPG00000010800	DDX27	99	73.522	Cavia_aperea
ENSAMXG00000000911	ddx27	100	72.938	ENSCPOG00000002009	DDX27	99	72.165	Cavia_porcellus
ENSAMXG00000000911	ddx27	100	72.387	ENSCCAG00000029782	DDX27	97	71.484	Cebus_capucinus
ENSAMXG00000000911	ddx27	100	72.645	ENSCATG00000034832	DDX27	99	71.613	Cercocebus_atys
ENSAMXG00000000911	ddx27	100	71.871	ENSCLAG00000008075	DDX27	99	71.742	Chinchilla_lanigera
ENSAMXG00000000911	ddx27	100	72.774	ENSCSAG00000014996	DDX27	99	71.613	Chlorocebus_sabaeus
ENSAMXG00000000911	ddx27	100	69.705	ENSCPBG00000026800	DDX27	98	70.308	Chrysemys_picta_bellii
ENSAMXG00000000911	ddx27	75	62.433	ENSCING00000004235	-	75	62.679	Ciona_intestinalis
ENSAMXG00000000911	ddx27	66	64.082	ENSCSAVG00000006949	-	100	64.082	Ciona_savignyi
ENSAMXG00000000911	ddx27	100	68.774	ENSCANG00000038431	DDX27	97	67.742	Colobus_angolensis_palliatus
ENSAMXG00000000911	ddx27	99	72.490	ENSCGRG00001015330	Ddx27	97	71.649	Cricetulus_griseus_chok1gshd
ENSAMXG00000000911	ddx27	99	72.490	ENSCGRG00000008199	Ddx27	99	71.649	Cricetulus_griseus_crigri
ENSAMXG00000000911	ddx27	99	71.669	ENSCSEG00000020260	ddx27	99	70.747	Cynoglossus_semilaevis
ENSAMXG00000000911	ddx27	99	70.413	ENSCVAG00000011736	ddx27	99	69.897	Cyprinodon_variegatus
ENSAMXG00000000911	ddx27	99	83.505	ENSDARG00000091831	ddx27	100	82.345	Danio_rerio
ENSAMXG00000000911	ddx27	100	72.739	ENSDNOG00000019453	DDX27	96	71.447	Dasypus_novemcinctus
ENSAMXG00000000911	ddx27	99	72.977	ENSDORG00000014137	Ddx27	99	71.484	Dipodomys_ordii
ENSAMXG00000000911	ddx27	79	52.174	FBgn0021995	Rs1	75	53.807	Drosophila_melanogaster
ENSAMXG00000000911	ddx27	90	61.007	ENSETEG00000018239	DDX27	86	61.295	Echinops_telfairi
ENSAMXG00000000911	ddx27	79	70.137	ENSEBUG00000004326	ddx27	96	68.760	Eptatretus_burgeri
ENSAMXG00000000911	ddx27	100	72.258	ENSEASG00005023342	DDX27	100	71.111	Equus_asinus_asinus
ENSAMXG00000000911	ddx27	100	72.129	ENSECAG00000020963	DDX27	99	71.871	Equus_caballus
ENSAMXG00000000911	ddx27	72	71.569	ENSEEUG00000012076	DDX27	70	70.980	Erinaceus_europaeus
ENSAMXG00000000911	ddx27	100	80.051	ENSELUG00000014535	ddx27	100	79.846	Esox_lucius
ENSAMXG00000000911	ddx27	100	72.680	ENSFCAG00000001448	DDX27	99	72.036	Felis_catus
ENSAMXG00000000911	ddx27	94	73.077	ENSFALG00000004884	DDX27	98	72.715	Ficedula_albicollis
ENSAMXG00000000911	ddx27	100	71.943	ENSFDAG00000018681	DDX27	99	71.815	Fukomys_damarensis
ENSAMXG00000000911	ddx27	76	78.584	ENSFHEG00000006419	ddx27	92	79.755	Fundulus_heteroclitus
ENSAMXG00000000911	ddx27	62	85.455	ENSGMOG00000016662	ddx27	83	74.827	Gadus_morhua
ENSAMXG00000000911	ddx27	94	72.230	ENSGALG00000006974	DDX27	100	69.459	Gallus_gallus
ENSAMXG00000000911	ddx27	95	70.845	ENSGAFG00000020344	ddx27	96	70.904	Gambusia_affinis
ENSAMXG00000000911	ddx27	99	70.249	ENSGACG00000003177	ddx27	100	69.740	Gasterosteus_aculeatus
ENSAMXG00000000911	ddx27	100	69.705	ENSGAGG00000001296	DDX27	100	70.180	Gopherus_agassizii
ENSAMXG00000000911	ddx27	79	80.135	ENSGGOG00000015474	-	97	79.085	Gorilla_gorilla
ENSAMXG00000000911	ddx27	100	72.351	ENSHBUG00000008119	ddx27	100	71.835	Haplochromis_burtoni
ENSAMXG00000000911	ddx27	100	71.521	ENSHGLG00000008388	DDX27	99	71.521	Heterocephalus_glaber_female
ENSAMXG00000000911	ddx27	100	71.521	ENSHGLG00100000130	DDX27	99	71.521	Heterocephalus_glaber_male
ENSAMXG00000000911	ddx27	100	85.990	ENSIPUG00000024627	ddx27	100	85.476	Ictalurus_punctatus
ENSAMXG00000000911	ddx27	99	71.410	ENSSTOG00000003645	DDX27	99	71.097	Ictidomys_tridecemlineatus
ENSAMXG00000000911	ddx27	100	67.829	ENSJJAG00000009056	Ddx27	100	66.796	Jaculus_jaculus
ENSAMXG00000000911	ddx27	99	71.466	ENSKMAG00000014889	ddx27	99	70.681	Kryptolebias_marmoratus
ENSAMXG00000000911	ddx27	77	78.125	ENSLBEG00000022589	ddx27	100	68.043	Labrus_bergylta
ENSAMXG00000000911	ddx27	100	73.544	ENSLACG00000011592	DDX27	100	73.571	Latimeria_chalumnae
ENSAMXG00000000911	ddx27	99	80.078	ENSLOCG00000002659	ddx27	99	80.078	Lepisosteus_oculatus
ENSAMXG00000000911	ddx27	100	73.325	ENSLAFG00000012190	DDX27	99	72.680	Loxodonta_africana
ENSAMXG00000000911	ddx27	100	72.938	ENSMFAG00000045749	DDX27	99	71.742	Macaca_fascicularis
ENSAMXG00000000911	ddx27	100	72.938	ENSMMUG00000023621	DDX27	99	71.742	Macaca_mulatta
ENSAMXG00000000911	ddx27	100	72.938	ENSMNEG00000043931	DDX27	99	71.742	Macaca_nemestrina
ENSAMXG00000000911	ddx27	100	70.452	ENSMLEG00000028160	DDX27	97	69.419	Mandrillus_leucophaeus
ENSAMXG00000000911	ddx27	99	71.447	ENSMAMG00000009174	ddx27	94	79.328	Mastacembelus_armatus
ENSAMXG00000000911	ddx27	100	72.351	ENSMZEG00005008750	ddx27	100	71.835	Maylandia_zebra
ENSAMXG00000000911	ddx27	90	73.257	ENSMGAG00000008727	DDX27	99	72.973	Meleagris_gallopavo
ENSAMXG00000000911	ddx27	99	73.072	ENSMAUG00000000552	Ddx27	99	71.835	Mesocricetus_auratus
ENSAMXG00000000911	ddx27	100	73.385	ENSMICG00000002005	DDX27	99	72.610	Microcebus_murinus
ENSAMXG00000000911	ddx27	99	73.629	ENSMOCG00000019594	Ddx27	99	72.258	Microtus_ochrogaster
ENSAMXG00000000911	ddx27	98	68.799	ENSMMOG00000012754	ddx27	90	77.888	Mola_mola
ENSAMXG00000000911	ddx27	100	72.833	ENSMODG00000016285	DDX27	99	72.186	Monodelphis_domestica
ENSAMXG00000000911	ddx27	98	70.542	ENSMALG00000020942	ddx27	92	70.118	Monopterus_albus
ENSAMXG00000000911	ddx27	99	72.810	MGP_CAROLIEiJ_G0024700	Ddx27	99	71.835	Mus_caroli
ENSAMXG00000000911	ddx27	99	72.418	ENSMUSG00000017999	Ddx27	99	71.447	Mus_musculus
ENSAMXG00000000911	ddx27	99	72.288	MGP_PahariEiJ_G0026142	Ddx27	99	71.447	Mus_pahari
ENSAMXG00000000911	ddx27	99	72.549	MGP_SPRETEiJ_G0025620	Ddx27	100	71.345	Mus_spretus
ENSAMXG00000000911	ddx27	100	70.747	ENSMPUG00000017572	DDX27	99	70.361	Mustela_putorius_furo
ENSAMXG00000000911	ddx27	100	72.716	ENSMLUG00000003186	DDX27	99	71.943	Myotis_lucifugus
ENSAMXG00000000911	ddx27	100	71.484	ENSNGAG00000023115	Ddx27	100	70.581	Nannospalax_galili
ENSAMXG00000000911	ddx27	100	60.265	ENSNLEG00000006961	DDX27	95	61.757	Nomascus_leucogenys
ENSAMXG00000000911	ddx27	100	69.340	ENSMEUG00000014412	DDX27	98	68.435	Notamacropus_eugenii
ENSAMXG00000000911	ddx27	100	72.258	ENSOPRG00000014589	DDX27	98	71.097	Ochotona_princeps
ENSAMXG00000000911	ddx27	99	72.621	ENSODEG00000006281	DDX27	99	71.778	Octodon_degus
ENSAMXG00000000911	ddx27	100	72.000	ENSONIG00000019473	ddx27	100	71.964	Oreochromis_niloticus
ENSAMXG00000000911	ddx27	99	71.039	ENSOANG00000006395	DDX27	97	70.769	Ornithorhynchus_anatinus
ENSAMXG00000000911	ddx27	100	68.766	ENSOCUG00000016108	DDX27	96	68.380	Oryctolagus_cuniculus
ENSAMXG00000000911	ddx27	99	71.022	ENSORLG00000013059	ddx27	100	71.022	Oryzias_latipes
ENSAMXG00000000911	ddx27	99	71.355	ENSORLG00020021215	ddx27	100	70.930	Oryzias_latipes_hni
ENSAMXG00000000911	ddx27	99	70.930	ENSORLG00015017588	ddx27	100	70.543	Oryzias_latipes_hsok
ENSAMXG00000000911	ddx27	99	71.151	ENSOMEG00000023896	ddx27	99	70.893	Oryzias_melastigma
ENSAMXG00000000911	ddx27	100	72.680	ENSOGAG00000002130	DDX27	99	72.294	Otolemur_garnettii
ENSAMXG00000000911	ddx27	92	74.366	ENSOARG00000012345	DDX27	99	75.070	Ovis_aries
ENSAMXG00000000911	ddx27	100	69.974	ENSPPAG00000035843	DDX27	94	74.856	Pan_paniscus
ENSAMXG00000000911	ddx27	100	72.774	ENSPPRG00000006728	DDX27	99	72.129	Panthera_pardus
ENSAMXG00000000911	ddx27	100	72.774	ENSPTIG00000011662	DDX27	99	72.129	Panthera_tigris_altaica
ENSAMXG00000000911	ddx27	100	72.774	ENSPTRG00000013602	DDX27	99	70.914	Pan_troglodytes
ENSAMXG00000000911	ddx27	100	66.881	ENSPANG00000000820	DDX27	99	65.722	Papio_anubis
ENSAMXG00000000911	ddx27	99	78.389	ENSPKIG00000002802	ddx27	79	84.790	Paramormyrops_kingsleyae
ENSAMXG00000000911	ddx27	90	70.899	ENSPSIG00000014493	DDX27	100	71.184	Pelodiscus_sinensis
ENSAMXG00000000911	ddx27	98	67.806	ENSPMGG00000013002	ddx27	99	66.980	Periophthalmus_magnuspinnatus
ENSAMXG00000000911	ddx27	99	72.810	ENSPEMG00000023215	Ddx27	99	71.447	Peromyscus_maniculatus_bairdii
ENSAMXG00000000911	ddx27	99	63.402	ENSPMAG00000003094	ddx27	96	64.304	Petromyzon_marinus
ENSAMXG00000000911	ddx27	80	80.634	ENSPCIG00000008052	DDX27	98	81.324	Phascolarctos_cinereus
ENSAMXG00000000911	ddx27	96	70.281	ENSPFOG00000012217	ddx27	100	70.013	Poecilia_formosa
ENSAMXG00000000911	ddx27	99	69.650	ENSPLAG00000005431	ddx27	100	69.390	Poecilia_latipinna
ENSAMXG00000000911	ddx27	69	79.020	ENSPMEG00000005563	ddx27	100	78.530	Poecilia_mexicana
ENSAMXG00000000911	ddx27	100	72.903	ENSPPYG00000011113	DDX27	99	72.129	Pongo_abelii
ENSAMXG00000000911	ddx27	100	72.516	ENSPCOG00000025327	DDX27	97	71.742	Propithecus_coquereli
ENSAMXG00000000911	ddx27	100	72.868	ENSPVAG00000006308	DDX27	97	72.610	Pteropus_vampyrus
ENSAMXG00000000911	ddx27	83	73.676	ENSPNYG00000014670	ddx27	98	73.053	Pundamilia_nyererei
ENSAMXG00000000911	ddx27	100	88.645	ENSPNAG00000016043	ddx27	100	88.083	Pygocentrus_nattereri
ENSAMXG00000000911	ddx27	99	71.634	ENSRNOG00000008081	Ddx27	99	70.930	Rattus_norvegicus
ENSAMXG00000000911	ddx27	100	70.145	ENSRBIG00000024112	DDX27	90	81.145	Rhinopithecus_bieti
ENSAMXG00000000911	ddx27	100	72.774	ENSRROG00000024811	DDX27	99	71.742	Rhinopithecus_roxellana
ENSAMXG00000000911	ddx27	68	41.561	YLL008W	-	65	44.828	Saccharomyces_cerevisiae
ENSAMXG00000000911	ddx27	100	72.129	ENSSBOG00000034281	DDX27	99	71.484	Saimiri_boliviensis_boliviensis
ENSAMXG00000000911	ddx27	99	69.974	ENSSMAG00000006972	ddx27	100	69.767	Scophthalmus_maximus
ENSAMXG00000000911	ddx27	99	71.928	ENSSDUG00000018855	ddx27	99	69.292	Seriola_dumerili
ENSAMXG00000000911	ddx27	99	70.274	ENSSLDG00000004114	ddx27	99	70.404	Seriola_lalandi_dorsalis
ENSAMXG00000000911	ddx27	84	75.786	ENSSPUG00000015687	DDX27	92	77.010	Sphenodon_punctatus
ENSAMXG00000000911	ddx27	96	69.565	ENSSPAG00000007670	ddx27	100	69.028	Stegastes_partitus
ENSAMXG00000000911	ddx27	100	72.294	ENSSSCG00000022915	DDX27	96	74.713	Sus_scrofa
ENSAMXG00000000911	ddx27	99	71.429	ENSTGUG00000005649	DDX27	100	70.260	Taeniopygia_guttata
ENSAMXG00000000911	ddx27	92	69.165	ENSTRUG00000002089	ddx27	96	69.622	Takifugu_rubripes
ENSAMXG00000000911	ddx27	92	75.610	ENSTNIG00000002987	ddx27	100	68.564	Tetraodon_nigroviridis
ENSAMXG00000000911	ddx27	100	65.677	ENSTBEG00000005320	DDX27	96	64.387	Tupaia_belangeri
ENSAMXG00000000911	ddx27	100	71.097	ENSTTRG00000004288	DDX27	96	70.065	Tursiops_truncatus
ENSAMXG00000000911	ddx27	85	74.125	ENSUAMG00000025519	DDX27	89	72.876	Ursus_americanus
ENSAMXG00000000911	ddx27	99	73.272	ENSUMAG00000024473	DDX27	99	72.036	Ursus_maritimus
ENSAMXG00000000911	ddx27	86	75.484	ENSVPAG00000001314	DDX27	86	76.206	Vicugna_pacos
ENSAMXG00000000911	ddx27	99	73.342	ENSVVUG00000022331	DDX27	99	72.108	Vulpes_vulpes
ENSAMXG00000000911	ddx27	79	78.741	ENSXETG00000017231	ddx27	99	70.779	Xenopus_tropicalis
ENSAMXG00000000911	ddx27	99	69.737	ENSXCOG00000017180	ddx27	99	69.868	Xiphophorus_couchianus
ENSAMXG00000000911	ddx27	99	69.650	ENSXMAG00000012284	ddx27	99	69.390	Xiphophorus_maculatus