EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000001084 (Gene tree)
Gene ID: 103047540
Gene Symbol: npm2a
Alias: im:7155659
Full Name: nucleoplasmin-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 11722 bases
Position: chrAPWO02002340.1:569921-581642
Accession: 103047540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000044103	Nucleoplasmin	PF03066.15	3.4e-26	1	1
ENSAMXP00000001106	Nucleoplasmin	PF03066.15	4.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000041121	-	1977	XM_022664493	ENSAMXP00000044103	145 (aa)	XP_022520214	UPI000BBD7CB0
ENSAMXT00000001106	-	471	-	ENSAMXP00000001106	156 (aa)	-	W5K0J6

Gene Model

Click here to download ENSAMXG00000001084's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000001084's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000001084	npm2a	68	40.000	ENSAMXG00000038475	npm2b	54	39.216
ENSAMXG00000001084	npm2a	66	42.000	ENSAMXG00000039828	npm3	52	42.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000001084	npm2a	76	40.678	ENSG00000158806	NPM2	85	39.655	Homo_sapiens
ENSAMXG00000001084	npm2a	86	39.231	ENSACAG00000000163	-	52	39.806	Anolis_carolinensis
ENSAMXG00000001084	npm2a	76	38.983	ENSANAG00000038138	-	76	39.806	Aotus_nancymaae
ENSAMXG00000001084	npm2a	74	36.283	ENSBTAG00000046918	NPM2	52	39.604	Bos_taurus
ENSAMXG00000001084	npm2a	75	38.462	ENSCJAG00000020389	NPM2	79	39.450	Callithrix_jacchus
ENSAMXG00000001084	npm2a	80	36.885	ENSCAFG00020015227	-	50	40.000	Canis_lupus_dingo
ENSAMXG00000001084	npm2a	83	37.008	ENSCAFG00020015194	-	51	40.000	Canis_lupus_dingo
ENSAMXG00000001084	npm2a	73	38.393	ENSCHIG00000026056	NPM2	51	39.604	Capra_hircus
ENSAMXG00000001084	npm2a	76	38.583	ENSTSYG00000026275	NPM2	83	39.316	Carlito_syrichta
ENSAMXG00000001084	npm2a	64	36.170	ENSCAPG00000006057	NPM2	52	35.789	Cavia_aperea
ENSAMXG00000001084	npm2a	64	36.170	ENSCPOG00000039799	NPM2	52	35.789	Cavia_porcellus
ENSAMXG00000001084	npm2a	76	38.983	ENSCCAG00000035076	NPM2	80	39.640	Cebus_capucinus
ENSAMXG00000001084	npm2a	76	39.831	ENSCATG00000031833	NPM2	76	40.777	Cercocebus_atys
ENSAMXG00000001084	npm2a	73	40.000	ENSCLAG00000013600	NPM2	53	38.462	Chinchilla_lanigera
ENSAMXG00000001084	npm2a	76	38.983	ENSCSAG00000016588	NPM2	53	39.604	Chlorocebus_sabaeus
ENSAMXG00000001084	npm2a	76	38.983	ENSCANG00000040109	NPM2	76	39.806	Colobus_angolensis_palliatus
ENSAMXG00000001084	npm2a	75	77.982	ENSDARG00000076391	npm2a	85	73.485	Danio_rerio
ENSAMXG00000001084	npm2a	68	43.564	ENSDARG00000053963	npm2b	57	43.689	Danio_rerio
ENSAMXG00000001084	npm2a	76	38.136	ENSEASG00005018856	NPM2	53	40.594	Equus_asinus_asinus
ENSAMXG00000001084	npm2a	78	68.966	ENSELUG00000017306	-	87	66.372	Esox_lucius
ENSAMXG00000001084	npm2a	68	43.000	ENSELUG00000004822	npm2b	60	41.748	Esox_lucius
ENSAMXG00000001084	npm2a	78	39.024	ENSFDAG00000007971	NPM2	59	38.739	Fukomys_damarensis
ENSAMXG00000001084	npm2a	69	48.039	ENSGALG00000050870	NPM2	52	48.039	Gallus_gallus
ENSAMXG00000001084	npm2a	82	49.593	ENSGALG00000054664	-	79	47.826	Gallus_gallus
ENSAMXG00000001084	npm2a	76	40.678	ENSGGOG00000007071	NPM2	76	41.748	Gorilla_gorilla
ENSAMXG00000001084	npm2a	72	38.318	ENSIPUG00000013175	npm2b	57	40.816	Ictalurus_punctatus
ENSAMXG00000001084	npm2a	94	80.147	ENSIPUG00000010101	npm2a	86	81.061	Ictalurus_punctatus
ENSAMXG00000001084	npm2a	79	43.089	ENSLACG00000016196	NPM2	62	45.370	Latimeria_chalumnae
ENSAMXG00000001084	npm2a	68	43.137	ENSLOCG00000014878	npm2b	55	41.667	Lepisosteus_oculatus
ENSAMXG00000001084	npm2a	76	39.831	ENSMFAG00000032098	NPM2	76	40.777	Macaca_fascicularis
ENSAMXG00000001084	npm2a	75	40.171	ENSMMUG00000002034	NPM2	76	40.777	Macaca_mulatta
ENSAMXG00000001084	npm2a	76	39.831	ENSMNEG00000010994	NPM2	76	40.777	Macaca_nemestrina
ENSAMXG00000001084	npm2a	76	39.831	ENSMLEG00000030071	NPM2	76	40.777	Mandrillus_leucophaeus
ENSAMXG00000001084	npm2a	78	35.385	ENSMICG00000030722	-	75	38.835	Microcebus_murinus
ENSAMXG00000001084	npm2a	74	35.398	ENSMOCG00000017251	Npm2	53	37.000	Microtus_ochrogaster
ENSAMXG00000001084	npm2a	68	38.462	ENSMODG00000009677	-	53	39.423	Monodelphis_domestica
ENSAMXG00000001084	npm2a	72	38.532	ENSMUSG00000047911	Npm2	57	40.000	Mus_musculus
ENSAMXG00000001084	npm2a	76	38.983	ENSNLEG00000035765	NPM2	76	39.806	Nomascus_leucogenys
ENSAMXG00000001084	npm2a	77	39.516	ENSODEG00000006433	NPM2	51	39.286	Octodon_degus
ENSAMXG00000001084	npm2a	79	38.211	ENSOCUG00000021756	NPM2	51	40.566	Oryctolagus_cuniculus
ENSAMXG00000001084	npm2a	76	40.678	ENSPPAG00000040749	NPM2	76	41.748	Pan_paniscus
ENSAMXG00000001084	npm2a	81	36.567	ENSPPRG00000022157	NPM2	84	38.462	Panthera_pardus
ENSAMXG00000001084	npm2a	71	37.931	ENSPTIG00000011553	NPM2	93	37.931	Panthera_tigris_altaica
ENSAMXG00000001084	npm2a	76	40.678	ENSPTRG00000020045	NPM2	76	41.748	Pan_troglodytes
ENSAMXG00000001084	npm2a	76	39.831	ENSPANG00000031080	NPM2	76	40.777	Papio_anubis
ENSAMXG00000001084	npm2a	75	67.568	ENSPKIG00000007241	npm2a	71	68.269	Paramormyrops_kingsleyae
ENSAMXG00000001084	npm2a	77	40.517	ENSPKIG00000009700	npm2b	53	41.346	Paramormyrops_kingsleyae
ENSAMXG00000001084	npm2a	82	42.742	ENSPSIG00000007722	NPM2	51	46.154	Pelodiscus_sinensis
ENSAMXG00000001084	npm2a	86	37.037	ENSPCIG00000012716	-	50	37.037	Phascolarctos_cinereus
ENSAMXG00000001084	npm2a	78	36.923	ENSPCOG00000018483	-	82	38.261	Propithecus_coquereli
ENSAMXG00000001084	npm2a	91	87.121	ENSPNAG00000018186	npm2a	90	87.121	Pygocentrus_nattereri
ENSAMXG00000001084	npm2a	68	42.574	ENSPNAG00000001303	npm2b	55	42.157	Pygocentrus_nattereri
ENSAMXG00000001084	npm2a	76	38.983	ENSRBIG00000029235	NPM2	76	39.806	Rhinopithecus_bieti
ENSAMXG00000001084	npm2a	76	38.983	ENSRROG00000044119	NPM2	76	39.806	Rhinopithecus_roxellana
ENSAMXG00000001084	npm2a	75	40.171	ENSSBOG00000025301	NPM2	75	41.176	Saimiri_boliviensis_boliviensis
ENSAMXG00000001084	npm2a	68	45.545	ENSSFOG00015010466	npm2b	59	45.631	Scleropages_formosus
ENSAMXG00000001084	npm2a	64	44.330	ENSSPUG00000011509	NPM2	70	44.444	Sphenodon_punctatus
ENSAMXG00000001084	npm2a	76	39.831	ENSSSCG00000009610	NPM2	55	41.584	Sus_scrofa
ENSAMXG00000001084	npm2a	86	44.800	ENSXETG00000016499	-	87	45.946	Xenopus_tropicalis
ENSAMXG00000001084	npm2a	83	40.299	ENSXETG00000010542	npm2	65	44.068	Xenopus_tropicalis