EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000001172 (Gene tree)
Gene ID: 103024403
Gene Symbol: esf1
Alias: fe06g12|im:7138472|wu:fe06g12|zgc:66241
Full Name: ESF1 nucleolar pre-rRNA processing protein homolog
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 16576 bases
Position: chr12:3438864-3455439
Accession: 103024403
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000043397	NUC153	PF08159.12	1.2e-12	1	1
ENSAMXP00000001196	NUC153	PF08159.12	6.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000036445	-	2205	-	ENSAMXP00000043397	734 (aa)	-	-
ENSAMXT00000001196	-	2145	XM_022674535	ENSAMXP00000001196	714 (aa)	XP_022530256	W5K0T6

Gene Model

Click here to download ENSAMXG00000001172's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000001172's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000001172	esf1	91	63.668	ENSG00000089048	ESF1	73	66.279	Homo_sapiens
ENSAMXG00000001172	esf1	70	64.000	ENSAPOG00000003004	esf1	99	63.602	Acanthochromis_polyacanthus
ENSAMXG00000001172	esf1	89	65.278	ENSAMEG00000008830	ESF1	74	64.103	Ailuropoda_melanoleuca
ENSAMXG00000001172	esf1	99	63.950	ENSACIG00000018305	esf1	80	67.714	Amphilophus_citrinellus
ENSAMXG00000001172	esf1	99	63.477	ENSAOCG00000006033	esf1	99	68.390	Amphiprion_ocellaris
ENSAMXG00000001172	esf1	99	60.336	ENSAPEG00000022385	esf1	79	64.883	Amphiprion_percula
ENSAMXG00000001172	esf1	99	56.576	ENSATEG00000016321	esf1	76	64.677	Anabas_testudineus
ENSAMXG00000001172	esf1	91	61.484	ENSAPLG00000012113	ESF1	76	60.601	Anas_platyrhynchos
ENSAMXG00000001172	esf1	90	67.949	ENSACAG00000000963	ESF1	76	67.949	Anolis_carolinensis
ENSAMXG00000001172	esf1	91	63.415	ENSANAG00000036778	ESF1	75	62.500	Aotus_nancymaae
ENSAMXG00000001172	esf1	99	62.933	ENSACLG00000002972	esf1	78	66.041	Astatotilapia_calliptera
ENSAMXG00000001172	esf1	89	63.316	ENSBTAG00000007130	ESF1	74	62.787	Bos_taurus
ENSAMXG00000001172	esf1	98	62.787	ENSCJAG00000004640	ESF1	75	62.324	Callithrix_jacchus
ENSAMXG00000001172	esf1	89	63.889	ENSCAFG00000005587	ESF1	75	62.982	Canis_familiaris
ENSAMXG00000001172	esf1	89	63.889	ENSCAFG00020027530	ESF1	75	62.982	Canis_lupus_dingo
ENSAMXG00000001172	esf1	92	62.500	ENSCHIG00000021188	ESF1	76	63.139	Capra_hircus
ENSAMXG00000001172	esf1	89	63.889	ENSTSYG00000009956	ESF1	75	62.852	Carlito_syrichta
ENSAMXG00000001172	esf1	92	65.278	ENSCAPG00000010466	-	68	53.274	Cavia_aperea
ENSAMXG00000001172	esf1	100	54.772	ENSCAPG00000010333	-	78	51.379	Cavia_aperea
ENSAMXG00000001172	esf1	92	63.889	ENSCPOG00000014027	-	76	63.204	Cavia_porcellus
ENSAMXG00000001172	esf1	90	63.316	ENSCCAG00000024521	ESF1	75	62.500	Cebus_capucinus
ENSAMXG00000001172	esf1	89	63.889	ENSCATG00000042792	ESF1	74	63.380	Cercocebus_atys
ENSAMXG00000001172	esf1	96	63.251	ENSCLAG00000013266	-	76	62.821	Chinchilla_lanigera
ENSAMXG00000001172	esf1	89	63.889	ENSCSAG00000011777	ESF1	74	63.380	Chlorocebus_sabaeus
ENSAMXG00000001172	esf1	92	37.719	ENSCING00000020446	-	52	46.547	Ciona_intestinalis
ENSAMXG00000001172	esf1	99	39.612	ENSCSAVG00000009015	-	78	40.035	Ciona_savignyi
ENSAMXG00000001172	esf1	89	64.085	ENSCANG00000030674	ESF1	74	63.556	Colobus_angolensis_palliatus
ENSAMXG00000001172	esf1	89	63.889	ENSCGRG00001018257	Esf1	76	63.316	Cricetulus_griseus_chok1gshd
ENSAMXG00000001172	esf1	79	63.242	ENSCSEG00000001159	esf1	78	57.711	Cynoglossus_semilaevis
ENSAMXG00000001172	esf1	99	63.165	ENSCVAG00000007894	esf1	81	65.979	Cyprinodon_variegatus
ENSAMXG00000001172	esf1	100	67.539	ENSDARG00000008740	esf1	76	72.806	Danio_rerio
ENSAMXG00000001172	esf1	94	63.380	ENSDNOG00000019409	ESF1	75	62.963	Dasypus_novemcinctus
ENSAMXG00000001172	esf1	89	64.261	ENSDORG00000016313	Esf1	76	63.556	Dipodomys_ordii
ENSAMXG00000001172	esf1	98	39.073	FBgn0024364	CG11417	77	37.908	Drosophila_melanogaster
ENSAMXG00000001172	esf1	76	62.500	ENSETEG00000004471	ESF1	56	65.476	Echinops_telfairi
ENSAMXG00000001172	esf1	88	68.657	ENSEBUG00000015161	esf1	77	64.865	Eptatretus_burgeri
ENSAMXG00000001172	esf1	93	63.668	ENSEASG00005001777	ESF1	74	63.204	Equus_asinus_asinus
ENSAMXG00000001172	esf1	93	63.668	ENSECAG00000019188	ESF1	74	63.204	Equus_caballus
ENSAMXG00000001172	esf1	79	43.739	ENSEEUG00000015837	-	75	50.000	Erinaceus_europaeus
ENSAMXG00000001172	esf1	75	63.383	ENSELUG00000000408	esf1	73	62.255	Esox_lucius
ENSAMXG00000001172	esf1	89	64.789	ENSFCAG00000000919	ESF1	74	64.103	Felis_catus
ENSAMXG00000001172	esf1	89	61.661	ENSFALG00000010914	ESF1	75	61.039	Ficedula_albicollis
ENSAMXG00000001172	esf1	92	63.889	ENSFDAG00000014777	ESF1	77	62.832	Fukomys_damarensis
ENSAMXG00000001172	esf1	70	66.798	ENSFHEG00000014984	esf1	99	67.583	Fundulus_heteroclitus
ENSAMXG00000001172	esf1	91	60.424	ENSGALG00000034768	ESF1	74	60.000	Gallus_gallus
ENSAMXG00000001172	esf1	99	59.572	ENSGAFG00000000540	esf1	81	63.423	Gambusia_affinis
ENSAMXG00000001172	esf1	98	63.492	ENSGGOG00000006692	ESF1	74	64.103	Gorilla_gorilla
ENSAMXG00000001172	esf1	99	63.648	ENSHBUG00000001890	esf1	78	66.780	Haplochromis_burtoni
ENSAMXG00000001172	esf1	96	62.917	ENSHGLG00000011505	ESF1	77	64.103	Heterocephalus_glaber_female
ENSAMXG00000001172	esf1	96	62.917	ENSHGLG00100015045	ESF1	77	64.103	Heterocephalus_glaber_male
ENSAMXG00000001172	esf1	100	68.782	ENSIPUG00000006507	esf1	100	66.156	Ictalurus_punctatus
ENSAMXG00000001172	esf1	89	63.908	ENSSTOG00000009846	ESF1	76	63.380	Ictidomys_tridecemlineatus
ENSAMXG00000001172	esf1	95	63.428	ENSJJAG00000012570	Esf1	75	64.103	Jaculus_jaculus
ENSAMXG00000001172	esf1	90	65.823	ENSLACG00000016439	ESF1	75	65.823	Latimeria_chalumnae
ENSAMXG00000001172	esf1	79	64.494	ENSLOCG00000015979	esf1	83	70.370	Lepisosteus_oculatus
ENSAMXG00000001172	esf1	93	62.500	ENSLAFG00000005479	ESF1	80	63.230	Loxodonta_africana
ENSAMXG00000001172	esf1	89	63.889	ENSMFAG00000036841	ESF1	74	63.556	Macaca_fascicularis
ENSAMXG00000001172	esf1	89	63.889	ENSMNEG00000044042	ESF1	74	63.556	Macaca_nemestrina
ENSAMXG00000001172	esf1	89	64.021	ENSMLEG00000037121	ESF1	74	63.556	Mandrillus_leucophaeus
ENSAMXG00000001172	esf1	99	64.800	ENSMAMG00000018648	esf1	99	68.911	Mastacembelus_armatus
ENSAMXG00000001172	esf1	70	67.327	ENSMZEG00005013912	esf1	99	65.941	Maylandia_zebra
ENSAMXG00000001172	esf1	100	58.974	ENSMGAG00000004291	ESF1	75	60.177	Meleagris_gallopavo
ENSAMXG00000001172	esf1	89	65.278	ENSMAUG00000015975	Esf1	75	64.425	Mesocricetus_auratus
ENSAMXG00000001172	esf1	89	65.278	ENSMICG00000010711	ESF1	74	64.103	Microcebus_murinus
ENSAMXG00000001172	esf1	92	63.889	ENSMOCG00000005902	Esf1	76	62.821	Microtus_ochrogaster
ENSAMXG00000001172	esf1	70	67.181	ENSMMOG00000018693	esf1	99	66.602	Mola_mola
ENSAMXG00000001172	esf1	79	62.787	ENSMODG00000005066	ESF1	68	63.139	Monodelphis_domestica
ENSAMXG00000001172	esf1	91	58.174	ENSMALG00000007338	esf1	70	64.892	Monopterus_albus
ENSAMXG00000001172	esf1	99	64.737	MGP_CAROLIEiJ_G0024365	Esf1	75	64.261	Mus_caroli
ENSAMXG00000001172	esf1	89	66.667	ENSMUSG00000045624	Esf1	75	66.234	Mus_musculus
ENSAMXG00000001172	esf1	89	65.278	MGP_PahariEiJ_G0025810	Esf1	75	64.437	Mus_pahari
ENSAMXG00000001172	esf1	89	66.667	MGP_SPRETEiJ_G0025285	Esf1	75	65.385	Mus_spretus
ENSAMXG00000001172	esf1	89	65.278	ENSMPUG00000001450	ESF1	74	64.103	Mustela_putorius_furo
ENSAMXG00000001172	esf1	89	65.278	ENSMLUG00000013080	ESF1	75	64.103	Myotis_lucifugus
ENSAMXG00000001172	esf1	89	65.278	ENSNLEG00000014563	ESF1	74	64.103	Nomascus_leucogenys
ENSAMXG00000001172	esf1	71	59.144	ENSOPRG00000004862	ESF1	100	58.755	Ochotona_princeps
ENSAMXG00000001172	esf1	92	62.500	ENSODEG00000006824	ESF1	78	63.204	Octodon_degus
ENSAMXG00000001172	esf1	99	62.418	ENSONIG00000006804	esf1	82	75.949	Oreochromis_niloticus
ENSAMXG00000001172	esf1	94	62.676	ENSOANG00000008432	-	75	69.231	Ornithorhynchus_anatinus
ENSAMXG00000001172	esf1	89	63.889	ENSOCUG00000005414	ESF1	76	62.821	Oryctolagus_cuniculus
ENSAMXG00000001172	esf1	70	62.572	ENSORLG00000018625	esf1	99	60.845	Oryzias_latipes
ENSAMXG00000001172	esf1	99	60.408	ENSORLG00015022826	esf1	81	63.932	Oryzias_latipes_hsok
ENSAMXG00000001172	esf1	70	62.692	ENSOMEG00000009311	esf1	99	62.405	Oryzias_melastigma
ENSAMXG00000001172	esf1	98	62.697	ENSOGAG00000016912	ESF1	77	61.972	Otolemur_garnettii
ENSAMXG00000001172	esf1	89	63.492	ENSOARG00000011158	ESF1	72	62.963	Ovis_aries
ENSAMXG00000001172	esf1	89	63.908	ENSPPAG00000024379	ESF1	75	63.380	Pan_paniscus
ENSAMXG00000001172	esf1	89	64.789	ENSPPRG00000012007	ESF1	74	64.103	Panthera_pardus
ENSAMXG00000001172	esf1	89	64.789	ENSPTIG00000020063	ESF1	74	64.103	Panthera_tigris_altaica
ENSAMXG00000001172	esf1	89	63.889	ENSPTRG00000013258	ESF1	74	63.380	Pan_troglodytes
ENSAMXG00000001172	esf1	100	56.707	ENSPKIG00000024448	esf1	69	62.852	Paramormyrops_kingsleyae
ENSAMXG00000001172	esf1	92	59.740	ENSPMGG00000016911	esf1	82	59.494	Periophthalmus_magnuspinnatus
ENSAMXG00000001172	esf1	92	71.429	ENSPCIG00000019331	ESF1	76	69.565	Phascolarctos_cinereus
ENSAMXG00000001172	esf1	99	58.081	ENSPFOG00000010101	esf1	79	62.375	Poecilia_formosa
ENSAMXG00000001172	esf1	70	66.206	ENSPLAG00000006452	esf1	99	65.810	Poecilia_latipinna
ENSAMXG00000001172	esf1	99	58.653	ENSPMEG00000000713	esf1	79	64.237	Poecilia_mexicana
ENSAMXG00000001172	esf1	99	58.917	ENSPREG00000004431	esf1	77	64.346	Poecilia_reticulata
ENSAMXG00000001172	esf1	89	65.278	ENSPPYG00000010715	ESF1	74	64.103	Pongo_abelii
ENSAMXG00000001172	esf1	89	63.889	ENSPCAG00000006881	ESF1	67	65.015	Procavia_capensis
ENSAMXG00000001172	esf1	81	66.667	ENSPVAG00000001295	ESF1	75	63.855	Pteropus_vampyrus
ENSAMXG00000001172	esf1	99	63.989	ENSPNYG00000015735	esf1	78	66.610	Pundamilia_nyererei
ENSAMXG00000001172	esf1	100	68.278	ENSPNAG00000014721	esf1	75	77.534	Pygocentrus_nattereri
ENSAMXG00000001172	esf1	89	65.278	ENSRNOG00000004777	Esf1	75	65.256	Rattus_norvegicus
ENSAMXG00000001172	esf1	89	63.889	ENSRBIG00000035763	ESF1	74	63.380	Rhinopithecus_bieti
ENSAMXG00000001172	esf1	89	64.021	ENSRROG00000032022	ESF1	74	63.556	Rhinopithecus_roxellana
ENSAMXG00000001172	esf1	89	63.889	ENSSBOG00000030387	ESF1	74	63.139	Saimiri_boliviensis_boliviensis
ENSAMXG00000001172	esf1	92	66.667	ENSSHAG00000000449	ESF1	77	65.385	Sarcophilus_harrisii
ENSAMXG00000001172	esf1	99	59.644	ENSSDUG00000019460	esf1	93	71.605	Seriola_dumerili
ENSAMXG00000001172	esf1	84	62.114	ENSSPUG00000012635	ESF1	79	66.667	Sphenodon_punctatus
ENSAMXG00000001172	esf1	99	60.875	ENSSPAG00000019077	esf1	78	62.417	Stegastes_partitus
ENSAMXG00000001172	esf1	89	65.278	ENSSSCG00000007077	ESF1	74	64.103	Sus_scrofa
ENSAMXG00000001172	esf1	89	61.111	ENSTGUG00000002450	ESF1	74	59.649	Taeniopygia_guttata
ENSAMXG00000001172	esf1	100	61.141	ENSTRUG00000009445	esf1	88	70.886	Takifugu_rubripes
ENSAMXG00000001172	esf1	65	70.000	ENSTBEG00000008552	ESF1	58	66.667	Tupaia_belangeri
ENSAMXG00000001172	esf1	89	61.444	ENSTTRG00000005335	ESF1	74	61.754	Tursiops_truncatus
ENSAMXG00000001172	esf1	89	63.889	ENSUMAG00000008579	ESF1	74	62.821	Ursus_maritimus
ENSAMXG00000001172	esf1	80	69.841	ENSVPAG00000005291	ESF1	67	69.444	Vicugna_pacos
ENSAMXG00000001172	esf1	89	63.889	ENSVVUG00000014318	ESF1	69	62.982	Vulpes_vulpes
ENSAMXG00000001172	esf1	85	63.889	ENSXETG00000008079	esf1	79	62.821	Xenopus_tropicalis
ENSAMXG00000001172	esf1	99	57.655	ENSXMAG00000017651	esf1	77	62.367	Xiphophorus_maculatus