EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000001210 (Gene tree)
Gene ID: 103042299
Gene Symbol: rnaseh2c
Alias: fc08g11|im:5617510|si:dkey-147f20.5|wu:fc08g11
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 2620 bases
Position: chr24:16782121-16784740
Accession: 103042299
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000001231	RNase_H2_suC	PF08615.11	3.1e-21	1	2
ENSAMXP00000001231	RNase_H2_suC	PF08615.11	3.1e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000001231	-	531	XM_007232887	ENSAMXP00000001231	135 (aa)	XP_007232949	W5K0X1

Gene Model

Click here to download ENSAMXG00000001210's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000001210's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000001210	rnaseh2c	100	65.926	ENSAPOG00000012901	rnaseh2c	99	65.926	Acanthochromis_polyacanthus
ENSAMXG00000001210	rnaseh2c	100	62.963	ENSACIG00000022433	rnaseh2c	99	62.963	Amphilophus_citrinellus
ENSAMXG00000001210	rnaseh2c	100	65.926	ENSAOCG00000016855	rnaseh2c	99	65.926	Amphiprion_ocellaris
ENSAMXG00000001210	rnaseh2c	100	66.667	ENSAPEG00000009850	rnaseh2c	99	66.667	Amphiprion_percula
ENSAMXG00000001210	rnaseh2c	100	68.148	ENSATEG00000014395	rnaseh2c	99	68.148	Anabas_testudineus
ENSAMXG00000001210	rnaseh2c	100	65.185	ENSACLG00000016950	rnaseh2c	99	65.185	Astatotilapia_calliptera
ENSAMXG00000001210	rnaseh2c	99	52.985	ENSCPBG00000023408	-	96	52.985	Chrysemys_picta_bellii
ENSAMXG00000001210	rnaseh2c	100	64.444	ENSCSEG00000005808	rnaseh2c	98	64.444	Cynoglossus_semilaevis
ENSAMXG00000001210	rnaseh2c	100	68.148	ENSCVAG00000006337	rnaseh2c	99	68.148	Cyprinodon_variegatus
ENSAMXG00000001210	rnaseh2c	100	74.815	ENSDARG00000089637	rnaseh2c	99	74.815	Danio_rerio
ENSAMXG00000001210	rnaseh2c	89	44.715	ENSEBUG00000014939	rnaseh2c	79	44.715	Eptatretus_burgeri
ENSAMXG00000001210	rnaseh2c	99	70.896	ENSELUG00000007345	rnaseh2c	98	70.896	Esox_lucius
ENSAMXG00000001210	rnaseh2c	95	70.312	ENSFHEG00000002419	rnaseh2c	95	69.231	Fundulus_heteroclitus
ENSAMXG00000001210	rnaseh2c	66	64.045	ENSGMOG00000008727	rnaseh2c	99	64.045	Gadus_morhua
ENSAMXG00000001210	rnaseh2c	100	66.667	ENSGAFG00000016755	rnaseh2c	82	66.667	Gambusia_affinis
ENSAMXG00000001210	rnaseh2c	99	55.056	ENSGAGG00000008193	-	96	52.985	Gopherus_agassizii
ENSAMXG00000001210	rnaseh2c	100	64.444	ENSHBUG00000012806	rnaseh2c	99	64.444	Haplochromis_burtoni
ENSAMXG00000001210	rnaseh2c	100	62.222	ENSHCOG00000007177	rnaseh2c	99	62.222	Hippocampus_comes
ENSAMXG00000001210	rnaseh2c	100	75.556	ENSIPUG00000018044	rnaseh2c	99	75.556	Ictalurus_punctatus
ENSAMXG00000001210	rnaseh2c	100	61.481	ENSKMAG00000004184	rnaseh2c	99	61.481	Kryptolebias_marmoratus
ENSAMXG00000001210	rnaseh2c	100	64.706	ENSLBEG00000005742	rnaseh2c	99	64.706	Labrus_bergylta
ENSAMXG00000001210	rnaseh2c	96	58.140	ENSLACG00000010120	-	92	57.692	Latimeria_chalumnae
ENSAMXG00000001210	rnaseh2c	100	65.185	ENSMAMG00000021610	rnaseh2c	99	65.185	Mastacembelus_armatus
ENSAMXG00000001210	rnaseh2c	100	65.185	ENSMZEG00005004796	rnaseh2c	99	65.185	Maylandia_zebra
ENSAMXG00000001210	rnaseh2c	100	62.963	ENSMMOG00000002869	rnaseh2c	99	62.963	Mola_mola
ENSAMXG00000001210	rnaseh2c	100	66.912	ENSMALG00000012198	rnaseh2c	99	66.912	Monopterus_albus
ENSAMXG00000001210	rnaseh2c	100	64.444	ENSNBRG00000001462	rnaseh2c	99	64.444	Neolamprologus_brichardi
ENSAMXG00000001210	rnaseh2c	100	63.704	ENSONIG00000005338	rnaseh2c	99	63.704	Oreochromis_niloticus
ENSAMXG00000001210	rnaseh2c	100	61.481	ENSORLG00000023473	rnaseh2c	99	61.481	Oryzias_latipes
ENSAMXG00000001210	rnaseh2c	100	60.000	ENSORLG00020019053	rnaseh2c	91	60.000	Oryzias_latipes_hni
ENSAMXG00000001210	rnaseh2c	100	61.481	ENSORLG00015017067	rnaseh2c	91	61.481	Oryzias_latipes_hsok
ENSAMXG00000001210	rnaseh2c	100	61.481	ENSOMEG00000018607	rnaseh2c	99	61.481	Oryzias_melastigma
ENSAMXG00000001210	rnaseh2c	100	62.963	ENSPKIG00000019331	rnaseh2c	99	62.963	Paramormyrops_kingsleyae
ENSAMXG00000001210	rnaseh2c	100	65.926	ENSPFOG00000009415	rnaseh2c	99	65.926	Poecilia_formosa
ENSAMXG00000001210	rnaseh2c	100	66.667	ENSPLAG00000023330	rnaseh2c	99	66.667	Poecilia_latipinna
ENSAMXG00000001210	rnaseh2c	100	65.185	ENSPMEG00000003696	rnaseh2c	99	65.185	Poecilia_mexicana
ENSAMXG00000001210	rnaseh2c	100	61.644	ENSPREG00000015384	rnaseh2c	72	61.644	Poecilia_reticulata
ENSAMXG00000001210	rnaseh2c	100	64.444	ENSPNYG00000014766	rnaseh2c	99	64.444	Pundamilia_nyererei
ENSAMXG00000001210	rnaseh2c	100	85.926	ENSPNAG00000019111	rnaseh2c	99	85.926	Pygocentrus_nattereri
ENSAMXG00000001210	rnaseh2c	100	72.593	ENSSFOG00015005760	rnaseh2c	99	72.593	Scleropages_formosus
ENSAMXG00000001210	rnaseh2c	100	65.926	ENSSMAG00000017738	rnaseh2c	99	65.926	Scophthalmus_maximus
ENSAMXG00000001210	rnaseh2c	100	65.185	ENSSDUG00000017285	rnaseh2c	99	65.185	Seriola_dumerili
ENSAMXG00000001210	rnaseh2c	100	66.667	ENSSLDG00000016030	rnaseh2c	99	66.667	Seriola_lalandi_dorsalis
ENSAMXG00000001210	rnaseh2c	95	51.908	ENSSPUG00000000842	-	86	51.908	Sphenodon_punctatus
ENSAMXG00000001210	rnaseh2c	100	64.444	ENSSPAG00000007536	rnaseh2c	99	64.444	Stegastes_partitus
ENSAMXG00000001210	rnaseh2c	100	59.259	ENSTRUG00000021845	rnaseh2c	99	59.259	Takifugu_rubripes
ENSAMXG00000001210	rnaseh2c	100	62.963	ENSTNIG00000000431	rnaseh2c	99	62.963	Tetraodon_nigroviridis
ENSAMXG00000001210	rnaseh2c	90	51.639	ENSXETG00000032466	-	89	51.639	Xenopus_tropicalis
ENSAMXG00000001210	rnaseh2c	100	67.407	ENSXCOG00000001611	rnaseh2c	99	67.407	Xiphophorus_couchianus
ENSAMXG00000001210	rnaseh2c	100	68.148	ENSXMAG00000003147	rnaseh2c	82	68.148	Xiphophorus_maculatus