EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000001254 (Gene tree)
Gene ID: 103032308
Gene Symbol: sall4
Alias: cb372|cb614|ik:tdsubc_2c1|sb:cb372|sb:cb614|wu:fa01g03|xx:tdsubc_2c1
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 11448 bases
Position: chr15:12752821-12764268
Accession: 103032308
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000033750	zf-C2H2	PF00096.26	6.7e-29	1	6
ENSAMXP00000033750	zf-C2H2	PF00096.26	6.7e-29	2	6
ENSAMXP00000033750	zf-C2H2	PF00096.26	6.7e-29	3	6
ENSAMXP00000033750	zf-C2H2	PF00096.26	6.7e-29	4	6
ENSAMXP00000033750	zf-C2H2	PF00096.26	6.7e-29	5	6
ENSAMXP00000033750	zf-C2H2	PF00096.26	6.7e-29	6	6
ENSAMXP00000001277	zf-C2H2	PF00096.26	9e-29	1	6
ENSAMXP00000001277	zf-C2H2	PF00096.26	9e-29	2	6
ENSAMXP00000001277	zf-C2H2	PF00096.26	9e-29	3	6
ENSAMXP00000001277	zf-C2H2	PF00096.26	9e-29	4	6
ENSAMXP00000001277	zf-C2H2	PF00096.26	9e-29	5	6
ENSAMXP00000001277	zf-C2H2	PF00096.26	9e-29	6	6
ENSAMXP00000033750	zf-met	PF12874.7	2.1e-15	1	3
ENSAMXP00000033750	zf-met	PF12874.7	2.1e-15	2	3
ENSAMXP00000033750	zf-met	PF12874.7	2.1e-15	3	3
ENSAMXP00000001277	zf-met	PF12874.7	3e-15	1	3
ENSAMXP00000001277	zf-met	PF12874.7	3e-15	2	3
ENSAMXP00000001277	zf-met	PF12874.7	3e-15	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000034890	-	6378	-	ENSAMXP00000033750	1066 (aa)	-	-
ENSAMXT00000001277	-	6184	XM_007258781	ENSAMXP00000001277	1107 (aa)	XP_007258843	W5K117

Gene Model

Click here to download ENSAMXG00000001254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000001254's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000001254	sall4	76	67.308	ENSAMXG00000017702	sall1b	80	67.308
ENSAMXG00000001254	sall4	99	65.385	ENSAMXG00000018599	sall1a	92	65.385
ENSAMXG00000001254	sall4	61	51.020	ENSAMXG00000042746	-	91	51.020
ENSAMXG00000001254	sall4	72	57.895	ENSAMXG00000035442	sall3b	71	70.423
ENSAMXG00000001254	sall4	69	51.020	ENSAMXG00000035127	-	80	57.143
ENSAMXG00000001254	sall4	85	65.385	ENSAMXG00000011185	sall3a	95	53.846
ENSAMXG00000001254	sall4	61	50.943	ENSAMXG00000017959	-	94	50.980
ENSAMXG00000001254	sall4	58	46.296	ENSAMXG00000034958	-	95	52.778
ENSAMXG00000001254	sall4	59	40.278	ENSAMXG00000039752	-	87	56.604
ENSAMXG00000001254	sall4	53	51.020	ENSAMXG00000026143	-	91	51.020
ENSAMXG00000001254	sall4	55	57.143	ENSAMXG00000026142	-	84	57.143
ENSAMXG00000001254	sall4	63	51.020	ENSAMXG00000040630	-	98	53.061
ENSAMXG00000001254	sall4	61	51.020	ENSAMXG00000039016	-	83	51.020
ENSAMXG00000001254	sall4	58	53.061	ENSAMXG00000039879	-	98	55.102
ENSAMXG00000001254	sall4	66	39.474	ENSAMXG00000010930	-	85	45.312
ENSAMXG00000001254	sall4	52	51.852	ENSAMXG00000013492	-	96	55.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000001254	sall4	99	45.909	ENSG00000101115	SALL4	99	53.333	Homo_sapiens
ENSAMXG00000001254	sall4	99	65.768	ENSAPOG00000002465	sall4	99	65.588	Acanthochromis_polyacanthus
ENSAMXG00000001254	sall4	99	47.388	ENSAMEG00000013250	-	99	47.048	Ailuropoda_melanoleuca
ENSAMXG00000001254	sall4	99	62.956	ENSACIG00000017298	sall4	99	62.511	Amphilophus_citrinellus
ENSAMXG00000001254	sall4	99	66.511	ENSAOCG00000023678	sall4	99	66.307	Amphiprion_ocellaris
ENSAMXG00000001254	sall4	99	66.325	ENSAPEG00000000751	sall4	99	66.128	Amphiprion_percula
ENSAMXG00000001254	sall4	99	65.858	ENSATEG00000024480	sall4	99	65.319	Anabas_testudineus
ENSAMXG00000001254	sall4	99	54.743	ENSAPLG00000006498	SALL4	99	54.609	Anas_platyrhynchos
ENSAMXG00000001254	sall4	99	53.533	ENSACAG00000012748	SALL4	99	53.144	Anolis_carolinensis
ENSAMXG00000001254	sall4	99	45.985	ENSANAG00000023352	SALL4	81	64.286	Aotus_nancymaae
ENSAMXG00000001254	sall4	99	64.093	ENSACLG00000017851	sall4	99	63.465	Astatotilapia_calliptera
ENSAMXG00000001254	sall4	99	44.768	ENSBTAG00000003101	SALL4	99	43.766	Bos_taurus
ENSAMXG00000001254	sall4	82	47.603	ENSCJAG00000000591	SALL4	96	47.603	Callithrix_jacchus
ENSAMXG00000001254	sall4	99	47.615	ENSCAFG00000011738	-	99	46.459	Canis_familiaris
ENSAMXG00000001254	sall4	99	47.523	ENSCAFG00020021870	SALL4	99	46.287	Canis_lupus_dingo
ENSAMXG00000001254	sall4	99	45.126	ENSCHIG00000026270	SALL4	99	44.041	Capra_hircus
ENSAMXG00000001254	sall4	99	46.133	ENSTSYG00000007359	SALL4	99	51.667	Carlito_syrichta
ENSAMXG00000001254	sall4	99	46.020	ENSCAPG00000012135	SALL4	95	45.644	Cavia_aperea
ENSAMXG00000001254	sall4	99	42.502	ENSCCAG00000029512	-	99	60.784	Cebus_capucinus
ENSAMXG00000001254	sall4	99	45.513	ENSCATG00000030757	SALL4	81	64.286	Cercocebus_atys
ENSAMXG00000001254	sall4	99	44.658	ENSCLAG00000010479	SALL4	99	44.138	Chinchilla_lanigera
ENSAMXG00000001254	sall4	99	45.788	ENSCSAG00000015269	SALL4	99	45.013	Chlorocebus_sabaeus
ENSAMXG00000001254	sall4	99	55.204	ENSCPBG00000014995	SALL4	99	55.266	Chrysemys_picta_bellii
ENSAMXG00000001254	sall4	99	45.933	ENSCANG00000036463	SALL4	99	45.130	Colobus_angolensis_palliatus
ENSAMXG00000001254	sall4	99	43.891	ENSCGRG00001019569	Sall4	99	54.634	Cricetulus_griseus_chok1gshd
ENSAMXG00000001254	sall4	99	43.982	ENSCGRG00000000462	Sall4	100	79.012	Cricetulus_griseus_crigri
ENSAMXG00000001254	sall4	99	66.099	ENSCSEG00000014604	sall4	99	66.039	Cynoglossus_semilaevis
ENSAMXG00000001254	sall4	99	65.549	ENSCVAG00000010815	sall4	99	64.574	Cyprinodon_variegatus
ENSAMXG00000001254	sall4	100	75.763	ENSDARG00000044485	sall4	100	75.494	Danio_rerio
ENSAMXG00000001254	sall4	99	46.516	ENSDNOG00000040633	SALL4	99	45.593	Dasypus_novemcinctus
ENSAMXG00000001254	sall4	99	43.382	ENSDORG00000012841	Sall4	98	64.286	Dipodomys_ordii
ENSAMXG00000001254	sall4	67	60.000	ENSETEG00000012475	-	55	60.000	Echinops_telfairi
ENSAMXG00000001254	sall4	99	47.291	ENSECAG00000018533	SALL4	99	46.160	Equus_caballus
ENSAMXG00000001254	sall4	99	45.670	ENSEEUG00000003649	SALL4	99	43.723	Erinaceus_europaeus
ENSAMXG00000001254	sall4	99	67.954	ENSELUG00000005696	sall4	99	67.252	Esox_lucius
ENSAMXG00000001254	sall4	99	46.295	ENSFCAG00000002822	SALL4	81	64.286	Felis_catus
ENSAMXG00000001254	sall4	99	53.090	ENSFALG00000013149	SALL4	99	53.043	Ficedula_albicollis
ENSAMXG00000001254	sall4	99	45.496	ENSFDAG00000017812	SALL4	99	45.486	Fukomys_damarensis
ENSAMXG00000001254	sall4	99	65.578	ENSFHEG00000014187	sall4	99	65.049	Fundulus_heteroclitus
ENSAMXG00000001254	sall4	99	64.086	ENSGMOG00000003822	sall4	99	63.971	Gadus_morhua
ENSAMXG00000001254	sall4	99	54.412	ENSGALG00000041365	SALL4	99	54.839	Gallus_gallus
ENSAMXG00000001254	sall4	99	65.610	ENSGAFG00000019925	sall4	99	64.901	Gambusia_affinis
ENSAMXG00000001254	sall4	99	63.636	ENSGACG00000011124	sall4	99	63.271	Gasterosteus_aculeatus
ENSAMXG00000001254	sall4	52	57.094	ENSGAGG00000002297	SALL4	99	54.656	Gopherus_agassizii
ENSAMXG00000001254	sall4	99	45.978	ENSGGOG00000001832	SALL4	81	64.286	Gorilla_gorilla
ENSAMXG00000001254	sall4	99	64.183	ENSHBUG00000007327	sall4	99	63.555	Haplochromis_burtoni
ENSAMXG00000001254	sall4	99	45.297	ENSHGLG00000009043	SALL4	94	44.922	Heterocephalus_glaber_female
ENSAMXG00000001254	sall4	99	45.297	ENSHGLG00100002722	SALL4	94	44.922	Heterocephalus_glaber_male
ENSAMXG00000001254	sall4	99	63.662	ENSHCOG00000008519	sall4	99	62.489	Hippocampus_comes
ENSAMXG00000001254	sall4	100	79.711	ENSIPUG00000019170	sall4	100	79.531	Ictalurus_punctatus
ENSAMXG00000001254	sall4	65	53.333	ENSSTOG00000025002	SALL4	100	87.324	Ictidomys_tridecemlineatus
ENSAMXG00000001254	sall4	99	47.166	ENSJJAG00000020688	Sall4	99	85.915	Jaculus_jaculus
ENSAMXG00000001254	sall4	99	65.392	ENSKMAG00000002501	sall4	99	64.658	Kryptolebias_marmoratus
ENSAMXG00000001254	sall4	99	65.229	ENSLBEG00000019951	sall4	99	64.870	Labrus_bergylta
ENSAMXG00000001254	sall4	99	48.820	ENSLACG00000013898	SALL4	99	63.158	Latimeria_chalumnae
ENSAMXG00000001254	sall4	99	67.008	ENSLOCG00000002427	sall4	99	67.325	Lepisosteus_oculatus
ENSAMXG00000001254	sall4	99	46.260	ENSLAFG00000004309	SALL4	99	45.684	Loxodonta_africana
ENSAMXG00000001254	sall4	99	45.604	ENSMFAG00000027169	SALL4	99	44.840	Macaca_fascicularis
ENSAMXG00000001254	sall4	94	45.375	ENSMMUG00000003870	SALL4	99	53.333	Macaca_mulatta
ENSAMXG00000001254	sall4	94	45.375	ENSMNEG00000035995	SALL4	81	64.286	Macaca_nemestrina
ENSAMXG00000001254	sall4	99	45.696	ENSMLEG00000030467	SALL4	99	45.013	Mandrillus_leucophaeus
ENSAMXG00000001254	sall4	99	65.651	ENSMAMG00000005223	sall4	99	65.125	Mastacembelus_armatus
ENSAMXG00000001254	sall4	99	64.004	ENSMZEG00005023418	sall4	99	63.375	Maylandia_zebra
ENSAMXG00000001254	sall4	76	63.462	ENSMGAG00000009344	SALL4	100	59.615	Meleagris_gallopavo
ENSAMXG00000001254	sall4	99	44.775	ENSMAUG00000015814	Sall4	100	72.727	Mesocricetus_auratus
ENSAMXG00000001254	sall4	99	46.956	ENSMICG00000000027	SALL4	82	64.286	Microcebus_murinus
ENSAMXG00000001254	sall4	99	45.217	ENSMOCG00000018245	Sall4	100	83.562	Microtus_ochrogaster
ENSAMXG00000001254	sall4	99	64.875	ENSMMOG00000014929	sall4	99	65.108	Mola_mola
ENSAMXG00000001254	sall4	99	50.408	ENSMODG00000016387	SALL4	97	49.274	Monodelphis_domestica
ENSAMXG00000001254	sall4	99	66.542	ENSMALG00000018709	sall4	99	66.076	Monopterus_albus
ENSAMXG00000001254	sall4	99	43.486	MGP_CAROLIEiJ_G0024723	Sall4	100	86.111	Mus_caroli
ENSAMXG00000001254	sall4	99	43.728	ENSMUSG00000027547	Sall4	100	86.111	Mus_musculus
ENSAMXG00000001254	sall4	99	42.667	MGP_PahariEiJ_G0026164	Sall4	100	86.111	Mus_pahari
ENSAMXG00000001254	sall4	99	43.649	MGP_SPRETEiJ_G0025643	Sall4	100	86.111	Mus_spretus
ENSAMXG00000001254	sall4	99	46.972	ENSMPUG00000017543	SALL4	96	45.776	Mustela_putorius_furo
ENSAMXG00000001254	sall4	99	43.538	ENSMLUG00000008405	-	99	42.806	Myotis_lucifugus
ENSAMXG00000001254	sall4	99	45.985	ENSMLUG00000007060	-	98	45.496	Myotis_lucifugus
ENSAMXG00000001254	sall4	99	35.031	ENSMLUG00000028073	-	99	34.629	Myotis_lucifugus
ENSAMXG00000001254	sall4	99	43.953	ENSNGAG00000017833	Sall4	83	64.286	Nannospalax_galili
ENSAMXG00000001254	sall4	99	63.971	ENSNBRG00000001829	sall4	99	63.342	Neolamprologus_brichardi
ENSAMXG00000001254	sall4	99	46.679	ENSNLEG00000007013	SALL4	99	45.833	Nomascus_leucogenys
ENSAMXG00000001254	sall4	88	63.462	ENSMEUG00000005793	-	99	63.462	Notamacropus_eugenii
ENSAMXG00000001254	sall4	99	46.941	ENSOPRG00000011640	SALL4	99	45.697	Ochotona_princeps
ENSAMXG00000001254	sall4	99	64.363	ENSONIG00000016557	sall4	99	63.824	Oreochromis_niloticus
ENSAMXG00000001254	sall4	99	54.322	ENSOANG00000008667	SALL4	97	54.283	Ornithorhynchus_anatinus
ENSAMXG00000001254	sall4	99	46.154	ENSOCUG00000011797	SALL4	98	45.852	Oryctolagus_cuniculus
ENSAMXG00000001254	sall4	99	64.651	ENSORLG00000016130	sall4	99	64.126	Oryzias_latipes
ENSAMXG00000001254	sall4	99	64.837	ENSORLG00020007339	sall4	99	64.395	Oryzias_latipes_hni
ENSAMXG00000001254	sall4	99	64.558	ENSORLG00015002265	sall4	99	64.036	Oryzias_latipes_hsok
ENSAMXG00000001254	sall4	99	64.804	ENSOMEG00000017344	sall4	99	64.452	Oryzias_melastigma
ENSAMXG00000001254	sall4	99	47.523	ENSOGAG00000013799	SALL4	99	47.392	Otolemur_garnettii
ENSAMXG00000001254	sall4	99	42.248	ENSOARG00000014570	SALL4	99	41.760	Ovis_aries
ENSAMXG00000001254	sall4	99	45.727	ENSPPAG00000038064	SALL4	81	64.286	Pan_paniscus
ENSAMXG00000001254	sall4	99	46.661	ENSPPRG00000008677	SALL4	81	64.286	Panthera_pardus
ENSAMXG00000001254	sall4	99	45.818	ENSPTRG00000013631	SALL4	81	64.286	Pan_troglodytes
ENSAMXG00000001254	sall4	94	45.375	ENSPANG00000021792	SALL4	81	64.286	Papio_anubis
ENSAMXG00000001254	sall4	99	67.056	ENSPKIG00000007074	sall4	99	66.966	Paramormyrops_kingsleyae
ENSAMXG00000001254	sall4	99	53.661	ENSPSIG00000009066	SALL4	99	54.000	Pelodiscus_sinensis
ENSAMXG00000001254	sall4	99	59.496	ENSPMGG00000022551	sall4	99	58.497	Periophthalmus_magnuspinnatus
ENSAMXG00000001254	sall4	99	44.535	ENSPEMG00000022706	Sall4	100	86.111	Peromyscus_maniculatus_bairdii
ENSAMXG00000001254	sall4	99	52.070	ENSPCIG00000022838	SALL4	97	51.038	Phascolarctos_cinereus
ENSAMXG00000001254	sall4	99	65.238	ENSPFOG00000001442	sall4	99	64.452	Poecilia_formosa
ENSAMXG00000001254	sall4	99	65.144	ENSPLAG00000008760	sall4	99	64.273	Poecilia_latipinna
ENSAMXG00000001254	sall4	99	65.144	ENSPMEG00000008497	sall4	99	64.273	Poecilia_mexicana
ENSAMXG00000001254	sall4	99	65.331	ENSPREG00000021140	sall4	99	64.542	Poecilia_reticulata
ENSAMXG00000001254	sall4	99	46.182	ENSPPYG00000011138	SALL4	99	45.368	Pongo_abelii
ENSAMXG00000001254	sall4	99	44.044	ENSPCAG00000004726	SALL4	99	43.056	Procavia_capensis
ENSAMXG00000001254	sall4	99	46.317	ENSPCOG00000016321	SALL4	81	64.286	Propithecus_coquereli
ENSAMXG00000001254	sall4	94	45.684	ENSPVAG00000002075	SALL4	94	44.606	Pteropus_vampyrus
ENSAMXG00000001254	sall4	99	63.971	ENSPNYG00000021738	sall4	99	63.432	Pundamilia_nyererei
ENSAMXG00000001254	sall4	100	84.192	ENSPNAG00000020929	sall4	100	83.288	Pygocentrus_nattereri
ENSAMXG00000001254	sall4	99	42.665	ENSRNOG00000050035	Sall4	83	62.500	Rattus_norvegicus
ENSAMXG00000001254	sall4	99	45.530	ENSRBIG00000039876	SALL4	99	44.753	Rhinopithecus_bieti
ENSAMXG00000001254	sall4	99	45.438	ENSRROG00000036585	SALL4	99	44.666	Rhinopithecus_roxellana
ENSAMXG00000001254	sall4	99	46.396	ENSSBOG00000030011	SALL4	99	45.391	Saimiri_boliviensis_boliviensis
ENSAMXG00000001254	sall4	95	65.385	ENSSHAG00000018013	SALL4	88	65.385	Sarcophilus_harrisii
ENSAMXG00000001254	sall4	99	66.263	ENSSFOG00015021075	sall4	99	65.709	Scleropages_formosus
ENSAMXG00000001254	sall4	99	66.729	ENSSMAG00000019218	sall4	99	66.338	Scophthalmus_maximus
ENSAMXG00000001254	sall4	99	67.351	ENSSDUG00000004657	sall4	99	67.116	Seriola_dumerili
ENSAMXG00000001254	sall4	99	67.296	ENSSLDG00000004973	sall4	99	67.026	Seriola_lalandi_dorsalis
ENSAMXG00000001254	sall4	99	67.116	ENSSPAG00000001978	sall4	99	66.846	Stegastes_partitus
ENSAMXG00000001254	sall4	99	46.295	ENSSSCG00000007479	SALL4	99	45.017	Sus_scrofa
ENSAMXG00000001254	sall4	99	65.412	ENSTRUG00000007410	sall4	99	65.171	Takifugu_rubripes
ENSAMXG00000001254	sall4	99	64.986	ENSTNIG00000012460	sall4	99	64.928	Tetraodon_nigroviridis
ENSAMXG00000001254	sall4	99	44.730	ENSTTRG00000007753	SALL4	98	43.403	Tursiops_truncatus
ENSAMXG00000001254	sall4	99	46.984	ENSUAMG00000010113	SALL4	99	45.909	Ursus_americanus
ENSAMXG00000001254	sall4	99	46.406	ENSUMAG00000024274	SALL4	98	46.168	Ursus_maritimus
ENSAMXG00000001254	sall4	99	51.322	ENSXETG00000012326	sall4	99	50.922	Xenopus_tropicalis
ENSAMXG00000001254	sall4	99	59.445	ENSXCOG00000015467	sall4	99	58.818	Xiphophorus_couchianus
ENSAMXG00000001254	sall4	99	59.624	ENSXMAG00000012692	sall4	96	67.647	Xiphophorus_maculatus