EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000001373 (Gene tree)
Gene ID: 103026726
Gene Symbol: cnot4a
Alias: si:dkey-230e6.2
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 11940 bases
Position: chr24:40556298-40568237
Accession: 103026726
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000001394	RRM_1	PF00076.22	6.5e-06	1	1
ENSAMXP00000041429	RRM_1	PF00076.22	9.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000001394	-	1881	-	ENSAMXP00000001394	626 (aa)	-	W5K1D4
ENSAMXT00000037887	-	6031	XM_007252834	ENSAMXP00000041429	790 (aa)	XP_007252896	UPI0003CD2ABD

Gene Model

Click here to download ENSAMXG00000001373's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000001373's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000001373	cnot4a	100	94.096	ENSAMXG00000011473	cnot4b	85	94.096

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000001373	cnot4a	100	72.171	ENSG00000080802	CNOT4	97	83.529	Homo_sapiens
ENSAMXG00000001373	cnot4a	93	87.789	ENSAPOG00000016272	cnot4a	83	95.185	Acanthochromis_polyacanthus
ENSAMXG00000001373	cnot4a	91	90.233	ENSAMEG00000012081	CNOT4	91	90.233	Ailuropoda_melanoleuca
ENSAMXG00000001373	cnot4a	100	95.185	ENSACIG00000003011	cnot4a	85	95.185	Amphilophus_citrinellus
ENSAMXG00000001373	cnot4a	100	95.185	ENSAOCG00000010792	cnot4a	100	81.481	Amphiprion_ocellaris
ENSAMXG00000001373	cnot4a	100	95.185	ENSAPEG00000004680	cnot4a	100	81.481	Amphiprion_percula
ENSAMXG00000001373	cnot4a	100	94.815	ENSATEG00000017580	cnot4a	100	80.061	Anabas_testudineus
ENSAMXG00000001373	cnot4a	100	67.317	ENSAPLG00000016441	CNOT4	100	67.195	Anas_platyrhynchos
ENSAMXG00000001373	cnot4a	100	67.805	ENSACAG00000011154	CNOT4	100	67.683	Anolis_carolinensis
ENSAMXG00000001373	cnot4a	100	72.171	ENSANAG00000032156	CNOT4	94	87.075	Aotus_nancymaae
ENSAMXG00000001373	cnot4a	100	95.185	ENSACLG00000002514	cnot4a	85	95.185	Astatotilapia_calliptera
ENSAMXG00000001373	cnot4a	100	71.537	ENSBTAG00000017919	CNOT4	100	72.451	Bos_taurus
ENSAMXG00000001373	cnot4a	100	72.171	ENSCJAG00000012532	CNOT4	97	83.294	Callithrix_jacchus
ENSAMXG00000001373	cnot4a	100	71.689	ENSCAFG00000003223	CNOT4	100	72.603	Canis_familiaris
ENSAMXG00000001373	cnot4a	100	72.171	ENSCAFG00020000093	CNOT4	100	73.089	Canis_lupus_dingo
ENSAMXG00000001373	cnot4a	100	72.018	ENSCHIG00000010955	CNOT4	100	72.936	Capra_hircus
ENSAMXG00000001373	cnot4a	100	71.842	ENSTSYG00000000893	CNOT4	99	82.110	Carlito_syrichta
ENSAMXG00000001373	cnot4a	95	84.437	ENSCAPG00000006213	CNOT4	100	84.437	Cavia_aperea
ENSAMXG00000001373	cnot4a	100	71.994	ENSCPOG00000011526	CNOT4	100	72.907	Cavia_porcellus
ENSAMXG00000001373	cnot4a	100	71.689	ENSCCAG00000024414	CNOT4	94	95.197	Cebus_capucinus
ENSAMXG00000001373	cnot4a	100	71.689	ENSCATG00000022607	CNOT4	97	83.294	Cercocebus_atys
ENSAMXG00000001373	cnot4a	100	72.630	ENSCLAG00000001857	CNOT4	100	73.547	Chinchilla_lanigera
ENSAMXG00000001373	cnot4a	100	71.134	ENSCSAG00000009096	CNOT4	100	71.728	Chlorocebus_sabaeus
ENSAMXG00000001373	cnot4a	63	94.652	ENSCHOG00000010412	CNOT4	65	94.652	Choloepus_hoffmanni
ENSAMXG00000001373	cnot4a	100	70.844	ENSCPBG00000004959	CNOT4	100	71.429	Chrysemys_picta_bellii
ENSAMXG00000001373	cnot4a	100	71.689	ENSCANG00000029319	CNOT4	97	83.294	Colobus_angolensis_palliatus
ENSAMXG00000001373	cnot4a	100	71.689	ENSCGRG00001014651	Cnot4	100	72.603	Cricetulus_griseus_chok1gshd
ENSAMXG00000001373	cnot4a	100	71.689	ENSCGRG00000005727	Cnot4	100	72.603	Cricetulus_griseus_crigri
ENSAMXG00000001373	cnot4a	94	95.185	ENSCSEG00000015080	cnot4a	79	95.185	Cynoglossus_semilaevis
ENSAMXG00000001373	cnot4a	100	94.444	ENSCVAG00000009399	cnot4a	100	79.598	Cyprinodon_variegatus
ENSAMXG00000001373	cnot4a	100	88.411	ENSDARG00000007045	cnot4a	100	87.231	Danio_rerio
ENSAMXG00000001373	cnot4a	100	92.086	ENSDARG00000007639	cnot4b	86	92.086	Danio_rerio
ENSAMXG00000001373	cnot4a	100	70.588	ENSDNOG00000009409	CNOT4	100	71.169	Dasypus_novemcinctus
ENSAMXG00000001373	cnot4a	100	73.212	ENSDORG00000012268	Cnot4	100	73.059	Dipodomys_ordii
ENSAMXG00000001373	cnot4a	97	67.263	ENSETEG00000013407	CNOT4	91	68.052	Echinops_telfairi
ENSAMXG00000001373	cnot4a	100	71.842	ENSEASG00005014430	CNOT4	100	72.755	Equus_asinus_asinus
ENSAMXG00000001373	cnot4a	100	71.842	ENSECAG00000020262	CNOT4	100	72.755	Equus_caballus
ENSAMXG00000001373	cnot4a	99	87.829	ENSELUG00000008742	cnot4a	84	93.502	Esox_lucius
ENSAMXG00000001373	cnot4a	94	92.453	ENSELUG00000011540	cnot4b	83	92.453	Esox_lucius
ENSAMXG00000001373	cnot4a	100	72.171	ENSFCAG00000011904	CNOT4	96	83.610	Felis_catus
ENSAMXG00000001373	cnot4a	100	67.439	ENSFALG00000011194	CNOT4	100	67.317	Ficedula_albicollis
ENSAMXG00000001373	cnot4a	100	71.842	ENSFDAG00000013525	CNOT4	100	72.755	Fukomys_damarensis
ENSAMXG00000001373	cnot4a	100	95.185	ENSFHEG00000006608	cnot4a	85	95.185	Fundulus_heteroclitus
ENSAMXG00000001373	cnot4a	95	90.741	ENSGMOG00000001329	cnot4a	100	69.183	Gadus_morhua
ENSAMXG00000001373	cnot4a	100	70.588	ENSGALG00000011682	CNOT4	100	71.169	Gallus_gallus
ENSAMXG00000001373	cnot4a	100	95.185	ENSGACG00000004276	cnot4a	91	95.185	Gasterosteus_aculeatus
ENSAMXG00000001373	cnot4a	100	70.588	ENSGAGG00000017331	CNOT4	100	71.169	Gopherus_agassizii
ENSAMXG00000001373	cnot4a	91	70.000	ENSGGOG00000000142	CNOT4	97	82.016	Gorilla_gorilla
ENSAMXG00000001373	cnot4a	100	95.185	ENSHBUG00000000027	cnot4a	85	95.185	Haplochromis_burtoni
ENSAMXG00000001373	cnot4a	100	71.994	ENSHGLG00000011533	CNOT4	100	73.059	Heterocephalus_glaber_female
ENSAMXG00000001373	cnot4a	83	74.457	ENSHGLG00100013058	CNOT4	94	74.275	Heterocephalus_glaber_male
ENSAMXG00000001373	cnot4a	93	90.526	ENSHCOG00000015815	cnot4a	82	94.444	Hippocampus_comes
ENSAMXG00000001373	cnot4a	100	90.397	ENSIPUG00000006393	cnot4	100	90.066	Ictalurus_punctatus
ENSAMXG00000001373	cnot4a	100	94.096	ENSIPUG00000016994	cnot4b	100	90.175	Ictalurus_punctatus
ENSAMXG00000001373	cnot4a	100	72.171	ENSSTOG00000007717	CNOT4	100	73.089	Ictidomys_tridecemlineatus
ENSAMXG00000001373	cnot4a	67	87.500	ENSJJAG00000019991	-	95	72.500	Jaculus_jaculus
ENSAMXG00000001373	cnot4a	100	72.171	ENSJJAG00000016618	Cnot4	100	73.242	Jaculus_jaculus
ENSAMXG00000001373	cnot4a	94	95.185	ENSKMAG00000004581	cnot4a	100	76.876	Kryptolebias_marmoratus
ENSAMXG00000001373	cnot4a	100	94.815	ENSLBEG00000009999	cnot4a	85	94.815	Labrus_bergylta
ENSAMXG00000001373	cnot4a	100	69.231	ENSLACG00000002647	CNOT4	99	70.588	Latimeria_chalumnae
ENSAMXG00000001373	cnot4a	100	94.118	ENSLOCG00000016126	cnot4a	85	94.118	Lepisosteus_oculatus
ENSAMXG00000001373	cnot4a	100	70.588	ENSLAFG00000000709	CNOT4	100	71.169	Loxodonta_africana
ENSAMXG00000001373	cnot4a	100	71.689	ENSMFAG00000046349	CNOT4	97	83.294	Macaca_fascicularis
ENSAMXG00000001373	cnot4a	100	71.689	ENSMMUG00000016181	CNOT4	97	83.294	Macaca_mulatta
ENSAMXG00000001373	cnot4a	100	72.171	ENSMNEG00000042164	CNOT4	97	83.294	Macaca_nemestrina
ENSAMXG00000001373	cnot4a	100	71.689	ENSMLEG00000032709	CNOT4	97	83.294	Mandrillus_leucophaeus
ENSAMXG00000001373	cnot4a	100	95.185	ENSMAMG00000023194	cnot4a	85	95.185	Mastacembelus_armatus
ENSAMXG00000001373	cnot4a	100	95.185	ENSMZEG00005007312	cnot4a	85	95.185	Maylandia_zebra
ENSAMXG00000001373	cnot4a	100	66.951	ENSMGAG00000011788	CNOT4	100	66.829	Meleagris_gallopavo
ENSAMXG00000001373	cnot4a	100	72.917	ENSMAUG00000020415	Cnot4	100	72.603	Mesocricetus_auratus
ENSAMXG00000001373	cnot4a	100	71.842	ENSMICG00000001667	CNOT4	100	83.295	Microcebus_murinus
ENSAMXG00000001373	cnot4a	100	71.537	ENSMOCG00000020955	Cnot4	100	72.451	Microtus_ochrogaster
ENSAMXG00000001373	cnot4a	90	81.100	ENSMMOG00000014565	cnot4a	96	80.756	Mola_mola
ENSAMXG00000001373	cnot4a	100	70.876	ENSMODG00000014068	CNOT4	100	71.466	Monodelphis_domestica
ENSAMXG00000001373	cnot4a	91	94.444	ENSMALG00000011662	cnot4a	76	94.444	Monopterus_albus
ENSAMXG00000001373	cnot4a	100	71.951	MGP_CAROLIEiJ_G0028217	Cnot4	100	72.866	Mus_caroli
ENSAMXG00000001373	cnot4a	100	72.171	ENSMUSG00000038784	Cnot4	100	73.089	Mus_musculus
ENSAMXG00000001373	cnot4a	100	72.018	MGP_PahariEiJ_G0021974	Cnot4	100	72.936	Mus_pahari
ENSAMXG00000001373	cnot4a	100	72.171	MGP_SPRETEiJ_G0029216	Cnot4	100	73.089	Mus_spretus
ENSAMXG00000001373	cnot4a	100	71.134	ENSMPUG00000004089	CNOT4	100	71.728	Mustela_putorius_furo
ENSAMXG00000001373	cnot4a	100	72.755	ENSMLUG00000008260	CNOT4	100	72.603	Myotis_lucifugus
ENSAMXG00000001373	cnot4a	100	72.451	ENSNGAG00000015030	Cnot4	100	72.603	Nannospalax_galili
ENSAMXG00000001373	cnot4a	100	77.626	ENSNBRG00000021144	cnot4a	100	77.287	Neolamprologus_brichardi
ENSAMXG00000001373	cnot4a	100	71.537	ENSNLEG00000013352	CNOT4	97	83.294	Nomascus_leucogenys
ENSAMXG00000001373	cnot4a	84	68.831	ENSOPRG00000001023	CNOT4	80	68.831	Ochotona_princeps
ENSAMXG00000001373	cnot4a	100	72.146	ENSODEG00000012975	CNOT4	100	73.059	Octodon_degus
ENSAMXG00000001373	cnot4a	100	95.185	ENSONIG00000008656	cnot4a	85	95.185	Oreochromis_niloticus
ENSAMXG00000001373	cnot4a	100	71.134	ENSOANG00000005006	CNOT4	100	71.728	Ornithorhynchus_anatinus
ENSAMXG00000001373	cnot4a	100	71.134	ENSOCUG00000013448	CNOT4	100	71.728	Oryctolagus_cuniculus
ENSAMXG00000001373	cnot4a	100	81.982	ENSORLG00000003727	cnot4a	85	94.815	Oryzias_latipes
ENSAMXG00000001373	cnot4a	100	82.282	ENSORLG00020015684	cnot4a	85	95.185	Oryzias_latipes_hni
ENSAMXG00000001373	cnot4a	100	82.282	ENSORLG00015008470	cnot4a	85	95.185	Oryzias_latipes_hsok
ENSAMXG00000001373	cnot4a	100	82.282	ENSOMEG00000011084	cnot4a	85	95.185	Oryzias_melastigma
ENSAMXG00000001373	cnot4a	100	70.588	ENSOGAG00000015499	CNOT4	100	71.169	Otolemur_garnettii
ENSAMXG00000001373	cnot4a	100	70.588	ENSOARG00000008803	CNOT4	100	71.169	Ovis_aries
ENSAMXG00000001373	cnot4a	100	71.842	ENSPPAG00000041937	CNOT4	97	83.529	Pan_paniscus
ENSAMXG00000001373	cnot4a	100	71.689	ENSPPRG00000023940	CNOT4	100	72.603	Panthera_pardus
ENSAMXG00000001373	cnot4a	100	72.171	ENSPTIG00000016601	CNOT4	96	83.610	Panthera_tigris_altaica
ENSAMXG00000001373	cnot4a	100	71.689	ENSPTRG00000019727	CNOT4	97	83.294	Pan_troglodytes
ENSAMXG00000001373	cnot4a	100	71.689	ENSPANG00000017724	CNOT4	97	83.294	Papio_anubis
ENSAMXG00000001373	cnot4a	85	89.744	ENSPKIG00000018137	cnot4a	100	89.744	Paramormyrops_kingsleyae
ENSAMXG00000001373	cnot4a	100	67.479	ENSPSIG00000011256	CNOT4	100	67.235	Pelodiscus_sinensis
ENSAMXG00000001373	cnot4a	100	80.887	ENSPMGG00000005671	cnot4a	100	80.887	Periophthalmus_magnuspinnatus
ENSAMXG00000001373	cnot4a	100	71.689	ENSPEMG00000021566	Cnot4	100	72.603	Peromyscus_maniculatus_bairdii
ENSAMXG00000001373	cnot4a	100	72.672	ENSPCIG00000029622	CNOT4	96	71.466	Phascolarctos_cinereus
ENSAMXG00000001373	cnot4a	100	95.185	ENSPFOG00000002228	cnot4a	85	95.185	Poecilia_formosa
ENSAMXG00000001373	cnot4a	100	95.185	ENSPLAG00000001780	cnot4a	100	80.308	Poecilia_latipinna
ENSAMXG00000001373	cnot4a	100	95.185	ENSPMEG00000006852	cnot4a	100	80.308	Poecilia_mexicana
ENSAMXG00000001373	cnot4a	100	95.185	ENSPREG00000008171	cnot4a	85	95.185	Poecilia_reticulata
ENSAMXG00000001373	cnot4a	100	71.134	ENSPPYG00000018026	CNOT4	100	71.728	Pongo_abelii
ENSAMXG00000001373	cnot4a	100	71.842	ENSPCOG00000019907	CNOT4	100	83.295	Propithecus_coquereli
ENSAMXG00000001373	cnot4a	94	70.588	ENSPVAG00000004905	CNOT4	90	71.169	Pteropus_vampyrus
ENSAMXG00000001373	cnot4a	100	95.185	ENSPNYG00000004276	cnot4a	85	95.185	Pundamilia_nyererei
ENSAMXG00000001373	cnot4a	100	94.834	ENSPNAG00000008679	cnot4b	100	87.417	Pygocentrus_nattereri
ENSAMXG00000001373	cnot4a	100	93.679	ENSPNAG00000020433	cnot4a	100	93.679	Pygocentrus_nattereri
ENSAMXG00000001373	cnot4a	100	71.282	ENSRNOG00000010795	Cnot4	100	71.875	Rattus_norvegicus
ENSAMXG00000001373	cnot4a	100	71.689	ENSRBIG00000043977	CNOT4	97	83.294	Rhinopithecus_bieti
ENSAMXG00000001373	cnot4a	100	72.324	ENSSBOG00000020808	CNOT4	97	83.529	Saimiri_boliviensis_boliviensis
ENSAMXG00000001373	cnot4a	100	70.876	ENSSHAG00000013639	CNOT4	100	71.466	Sarcophilus_harrisii
ENSAMXG00000001373	cnot4a	100	87.241	ENSSFOG00015002019	cnot4a	100	88.070	Scleropages_formosus
ENSAMXG00000001373	cnot4a	100	92.806	ENSSFOG00015017285	CNOT4	100	78.493	Scleropages_formosus
ENSAMXG00000001373	cnot4a	100	95.185	ENSSMAG00000008614	cnot4a	85	95.185	Scophthalmus_maximus
ENSAMXG00000001373	cnot4a	100	95.185	ENSSDUG00000022635	cnot4a	85	95.185	Seriola_dumerili
ENSAMXG00000001373	cnot4a	88	85.762	ENSSDUG00000018585	cnot4b	100	86.093	Seriola_dumerili
ENSAMXG00000001373	cnot4a	100	95.185	ENSSLDG00000015770	cnot4a	100	81.346	Seriola_lalandi_dorsalis
ENSAMXG00000001373	cnot4a	100	62.805	ENSSLDG00000014347	cnot4b	100	62.439	Seriola_lalandi_dorsalis
ENSAMXG00000001373	cnot4a	100	72.492	ENSSPUG00000004677	CNOT4	100	72.340	Sphenodon_punctatus
ENSAMXG00000001373	cnot4a	100	95.185	ENSSPAG00000012329	cnot4a	100	80.974	Stegastes_partitus
ENSAMXG00000001373	cnot4a	100	71.689	ENSSSCG00000021354	CNOT4	100	72.603	Sus_scrofa
ENSAMXG00000001373	cnot4a	100	67.439	ENSTGUG00000009161	CNOT4	100	67.317	Taeniopygia_guttata
ENSAMXG00000001373	cnot4a	100	87.459	ENSTRUG00000016861	cnot4a	91	89.965	Takifugu_rubripes
ENSAMXG00000001373	cnot4a	100	75.000	ENSTNIG00000016000	cnot4a	100	69.870	Tetraodon_nigroviridis
ENSAMXG00000001373	cnot4a	94	68.519	ENSTBEG00000002202	CNOT4	88	67.725	Tupaia_belangeri
ENSAMXG00000001373	cnot4a	93	72.241	ENSTTRG00000005122	CNOT4	90	71.169	Tursiops_truncatus
ENSAMXG00000001373	cnot4a	100	71.689	ENSUAMG00000026759	CNOT4	100	72.603	Ursus_americanus
ENSAMXG00000001373	cnot4a	99	71.779	ENSUMAG00000015351	CNOT4	94	74.275	Ursus_maritimus
ENSAMXG00000001373	cnot4a	100	72.171	ENSVVUG00000006200	CNOT4	100	73.089	Vulpes_vulpes
ENSAMXG00000001373	cnot4a	100	91.481	ENSXETG00000010594	cnot4	89	91.481	Xenopus_tropicalis
ENSAMXG00000001373	cnot4a	79	91.579	ENSXCOG00000020824	cnot4a	99	70.563	Xiphophorus_couchianus
ENSAMXG00000001373	cnot4a	100	95.185	ENSXMAG00000016984	cnot4a	85	95.185	Xiphophorus_maculatus