EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000001477 (Gene tree)
Gene ID: 103022948
Gene Symbol: hnrnpd
Alias: wu:fa28b06|zgc:162951
Full Name: heterogeneous nuclear ribonucleoprotein D0
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 6000 bases
Position: chr20:22493677-22499676
Accession: 103022948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000001510	CBFNT	PF08143.11	1.7e-06	1	1
ENSAMXP00000001510	RRM_1	PF00076.22	3e-35	1	2
ENSAMXP00000001510	RRM_1	PF00076.22	3e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000001510	-	930	XM_007241051	ENSAMXP00000001510	309 (aa)	XP_007241113	W5K1Q0

Gene Model

Click here to download ENSAMXG00000001477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000001477's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000001477	hnrnpd	96	66.343	ENSAMXG00000039814	hnrnpabb	89	70.318
ENSAMXG00000001477	hnrnpd	67	31.818	ENSAMXG00000039469	TRA2B	50	31.818
ENSAMXG00000001477	hnrnpd	67	44.601	ENSAMXG00000032796	msi2a	62	43.602
ENSAMXG00000001477	hnrnpd	89	65.625	ENSAMXG00000001495	hnrnpdl	95	60.915
ENSAMXG00000001477	hnrnpd	74	40.756	ENSAMXG00000010474	msi2b	60	45.550
ENSAMXG00000001477	hnrnpd	54	35.260	ENSAMXG00000037730	-	58	36.041
ENSAMXG00000001477	hnrnpd	57	33.537	ENSAMXG00000030795	tardbpl	52	33.537
ENSAMXG00000001477	hnrnpd	54	39.884	ENSAMXG00000006296	hnrnpa1a	75	35.540
ENSAMXG00000001477	hnrnpd	61	72.222	ENSAMXG00000002560	hnrnpaba	87	63.918
ENSAMXG00000001477	hnrnpd	54	35.260	ENSAMXG00000024951	-	73	33.659

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000001477	hnrnpd	90	85.000	ENSG00000138668	HNRNPD	100	90.090	Homo_sapiens
ENSAMXG00000001477	hnrnpd	100	82.965	ENSAPOG00000006184	hnrnpd	100	86.435	Acanthochromis_polyacanthus
ENSAMXG00000001477	hnrnpd	91	77.741	ENSAMEG00000005158	HNRNPD	94	81.063	Ailuropoda_melanoleuca
ENSAMXG00000001477	hnrnpd	81	83.984	ENSACIG00000008353	hnrnpd	83	84.766	Amphilophus_citrinellus
ENSAMXG00000001477	hnrnpd	100	83.281	ENSAOCG00000014191	hnrnpd	100	86.751	Amphiprion_ocellaris
ENSAMXG00000001477	hnrnpd	100	82.650	ENSAPEG00000005603	hnrnpd	100	86.120	Amphiprion_percula
ENSAMXG00000001477	hnrnpd	100	82.965	ENSATEG00000007097	hnrnpd	100	86.435	Anabas_testudineus
ENSAMXG00000001477	hnrnpd	87	85.769	ENSACAG00000010342	HNRNPD	100	85.385	Anolis_carolinensis
ENSAMXG00000001477	hnrnpd	91	85.106	ENSANAG00000035221	HNRNPD	83	86.879	Aotus_nancymaae
ENSAMXG00000001477	hnrnpd	88	92.664	ENSACLG00000026497	hnrnpd	100	93.436	Astatotilapia_calliptera
ENSAMXG00000001477	hnrnpd	100	85.443	ENSACLG00000025213	hnrnpd	100	86.076	Astatotilapia_calliptera
ENSAMXG00000001477	hnrnpd	90	79.599	ENSBTAG00000013952	HNRNPD	84	81.063	Bos_taurus
ENSAMXG00000001477	hnrnpd	90	85.000	ENSCJAG00000015165	HNRNPD	83	86.879	Callithrix_jacchus
ENSAMXG00000001477	hnrnpd	90	77.258	ENSCAFG00000025045	HNRNPD	84	81.395	Canis_familiaris
ENSAMXG00000001477	hnrnpd	90	77.258	ENSCAFG00020010713	HNRNPD	84	81.395	Canis_lupus_dingo
ENSAMXG00000001477	hnrnpd	90	85.000	ENSCHIG00000022317	HNRNPD	83	86.525	Capra_hircus
ENSAMXG00000001477	hnrnpd	88	83.415	ENSTSYG00000010395	HNRNPD	100	85.854	Carlito_syrichta
ENSAMXG00000001477	hnrnpd	87	78.244	ENSCPOG00000040484	HNRNPD	77	80.153	Cavia_porcellus
ENSAMXG00000001477	hnrnpd	64	61.000	ENSCCAG00000021563	-	71	65.217	Cebus_capucinus
ENSAMXG00000001477	hnrnpd	90	85.000	ENSCCAG00000024528	HNRNPD	83	86.879	Cebus_capucinus
ENSAMXG00000001477	hnrnpd	90	85.000	ENSCATG00000039829	HNRNPD	83	86.879	Cercocebus_atys
ENSAMXG00000001477	hnrnpd	89	85.252	ENSCLAG00000006540	HNRNPD	92	87.050	Chinchilla_lanigera
ENSAMXG00000001477	hnrnpd	90	79.599	ENSCSAG00000004463	HNRNPD	84	81.395	Chlorocebus_sabaeus
ENSAMXG00000001477	hnrnpd	87	82.657	ENSCHOG00000000045	HNRNPD	98	84.502	Choloepus_hoffmanni
ENSAMXG00000001477	hnrnpd	88	83.150	ENSCPBG00000008025	HNRNPD	85	85.512	Chrysemys_picta_bellii
ENSAMXG00000001477	hnrnpd	90	85.357	ENSCANG00000018501	HNRNPD	83	87.234	Colobus_angolensis_palliatus
ENSAMXG00000001477	hnrnpd	90	85.357	ENSCGRG00001014634	Hnrnpd	84	87.234	Cricetulus_griseus_chok1gshd
ENSAMXG00000001477	hnrnpd	91	80.420	ENSCGRG00000007563	Hnrnpd	96	84.559	Cricetulus_griseus_crigri
ENSAMXG00000001477	hnrnpd	96	84.590	ENSCSEG00000010909	hnrnpd	88	83.986	Cynoglossus_semilaevis
ENSAMXG00000001477	hnrnpd	100	83.912	ENSCVAG00000019790	hnrnpd	100	84.543	Cyprinodon_variegatus
ENSAMXG00000001477	hnrnpd	100	92.038	ENSDARG00000059246	hnrnpd	100	90.446	Danio_rerio
ENSAMXG00000001477	hnrnpd	70	73.272	ENSDNOG00000045079	-	72	71.429	Dasypus_novemcinctus
ENSAMXG00000001477	hnrnpd	57	74.432	ENSDNOG00000041055	-	71	72.527	Dasypus_novemcinctus
ENSAMXG00000001477	hnrnpd	87	83.026	ENSDNOG00000013830	-	76	84.871	Dasypus_novemcinctus
ENSAMXG00000001477	hnrnpd	90	85.000	ENSDORG00000012507	Hnrnpd	96	86.879	Dipodomys_ordii
ENSAMXG00000001477	hnrnpd	88	78.767	ENSETEG00000016709	HNRNPD	84	81.395	Echinops_telfairi
ENSAMXG00000001477	hnrnpd	90	85.000	ENSEASG00005016278	HNRNPD	83	86.879	Equus_asinus_asinus
ENSAMXG00000001477	hnrnpd	90	77.258	ENSECAG00000009344	HNRNPD	84	81.395	Equus_caballus
ENSAMXG00000001477	hnrnpd	91	72.757	ENSEEUG00000007552	HNRNPD	84	72.093	Erinaceus_europaeus
ENSAMXG00000001477	hnrnpd	78	81.200	ENSELUG00000003230	hnrnpd	75	86.996	Esox_lucius
ENSAMXG00000001477	hnrnpd	90	83.214	ENSFCAG00000027404	HNRNPD	84	81.395	Felis_catus
ENSAMXG00000001477	hnrnpd	89	85.252	ENSFALG00000005716	HNRNPD	85	86.219	Ficedula_albicollis
ENSAMXG00000001477	hnrnpd	91	80.142	ENSFDAG00000007958	HNRNPD	80	84.191	Fukomys_damarensis
ENSAMXG00000001477	hnrnpd	100	81.073	ENSFHEG00000006838	hnrnpd	100	84.543	Fundulus_heteroclitus
ENSAMXG00000001477	hnrnpd	100	75.625	ENSGMOG00000018481	hnrnpd	100	70.552	Gadus_morhua
ENSAMXG00000001477	hnrnpd	88	83.516	ENSGALG00000011184	HNRNPD	100	87.308	Gallus_gallus
ENSAMXG00000001477	hnrnpd	100	81.875	ENSGAFG00000003714	hnrnpd	100	82.188	Gambusia_affinis
ENSAMXG00000001477	hnrnpd	100	76.161	ENSGACG00000015669	hnrnpd	100	79.567	Gasterosteus_aculeatus
ENSAMXG00000001477	hnrnpd	88	77.740	ENSGAGG00000003656	HNRNPD	88	80.132	Gopherus_agassizii
ENSAMXG00000001477	hnrnpd	100	75.563	ENSGGOG00000026760	HNRNPD	94	87.356	Gorilla_gorilla
ENSAMXG00000001477	hnrnpd	100	85.443	ENSHBUG00000011794	hnrnpd	100	86.076	Haplochromis_burtoni
ENSAMXG00000001477	hnrnpd	91	85.106	ENSHGLG00000004214	HNRNPD	83	86.525	Heterocephalus_glaber_female
ENSAMXG00000001477	hnrnpd	87	85.441	ENSHGLG00100005996	HNRNPD	100	86.923	Heterocephalus_glaber_male
ENSAMXG00000001477	hnrnpd	96	76.721	ENSHCOG00000000087	hnrnpd	84	82.374	Hippocampus_comes
ENSAMXG00000001477	hnrnpd	99	84.839	ENSIPUG00000024954	hnrnpd	99	84.194	Ictalurus_punctatus
ENSAMXG00000001477	hnrnpd	90	84.946	ENSSTOG00000013970	HNRNPD	83	86.879	Ictidomys_tridecemlineatus
ENSAMXG00000001477	hnrnpd	90	85.000	ENSJJAG00000023387	Hnrnpd	95	86.525	Jaculus_jaculus
ENSAMXG00000001477	hnrnpd	100	81.013	ENSKMAG00000004310	hnrnpd	90	88.421	Kryptolebias_marmoratus
ENSAMXG00000001477	hnrnpd	100	84.494	ENSLBEG00000027508	hnrnpd	100	85.127	Labrus_bergylta
ENSAMXG00000001477	hnrnpd	100	82.748	ENSLACG00000005306	HNRNPD	91	87.633	Latimeria_chalumnae
ENSAMXG00000001477	hnrnpd	100	87.821	ENSLOCG00000010743	hnrnpd	100	86.218	Lepisosteus_oculatus
ENSAMXG00000001477	hnrnpd	87	82.721	ENSLAFG00000016483	HNRNPD	98	84.559	Loxodonta_africana
ENSAMXG00000001477	hnrnpd	90	85.000	ENSMFAG00000031674	HNRNPD	83	86.879	Macaca_fascicularis
ENSAMXG00000001477	hnrnpd	90	85.000	ENSMNEG00000028199	HNRNPD	83	86.879	Macaca_nemestrina
ENSAMXG00000001477	hnrnpd	90	85.000	ENSMLEG00000028370	HNRNPD	83	86.879	Mandrillus_leucophaeus
ENSAMXG00000001477	hnrnpd	100	84.177	ENSMAMG00000004971	hnrnpd	100	84.810	Mastacembelus_armatus
ENSAMXG00000001477	hnrnpd	100	85.443	ENSMZEG00005007558	hnrnpd	100	86.076	Maylandia_zebra
ENSAMXG00000001477	hnrnpd	87	82.759	ENSMGAG00000008051	HNRNPD	100	87.356	Meleagris_gallopavo
ENSAMXG00000001477	hnrnpd	90	85.357	ENSMAUG00000008830	Hnrnpd	84	87.234	Mesocricetus_auratus
ENSAMXG00000001477	hnrnpd	88	83.516	ENSMICG00000010984	HNRNPD	88	86.879	Microcebus_murinus
ENSAMXG00000001477	hnrnpd	91	85.106	ENSMOCG00000021398	Hnrnpd	83	86.879	Microtus_ochrogaster
ENSAMXG00000001477	hnrnpd	98	81.672	ENSMMOG00000008627	hnrnpd	88	87.097	Mola_mola
ENSAMXG00000001477	hnrnpd	91	78.808	ENSMODG00000011898	HNRNPD	78	81.208	Monodelphis_domestica
ENSAMXG00000001477	hnrnpd	100	80.126	ENSMALG00000016024	hnrnpd	100	84.227	Monopterus_albus
ENSAMXG00000001477	hnrnpd	90	85.357	MGP_CAROLIEiJ_G0027446	Hnrnpd	100	96.000	Mus_caroli
ENSAMXG00000001477	hnrnpd	90	85.357	ENSMUSG00000000568	Hnrnpd	100	96.000	Mus_musculus
ENSAMXG00000001477	hnrnpd	90	83.571	MGP_PahariEiJ_G0017224	Hnrnpd	100	96.000	Mus_pahari
ENSAMXG00000001477	hnrnpd	90	85.357	MGP_SPRETEiJ_G0028443	Hnrnpd	100	96.000	Mus_spretus
ENSAMXG00000001477	hnrnpd	87	83.026	ENSMPUG00000014782	HNRNPD	98	84.871	Mustela_putorius_furo
ENSAMXG00000001477	hnrnpd	90	72.575	ENSMLUG00000010628	HNRNPD	84	73.754	Myotis_lucifugus
ENSAMXG00000001477	hnrnpd	90	85.357	ENSNGAG00000013451	Hnrnpd	84	87.234	Nannospalax_galili
ENSAMXG00000001477	hnrnpd	100	85.759	ENSNBRG00000019548	hnrnpd	100	86.392	Neolamprologus_brichardi
ENSAMXG00000001477	hnrnpd	91	83.803	ENSNLEG00000008600	HNRNPD	81	87.636	Nomascus_leucogenys
ENSAMXG00000001477	hnrnpd	69	81.818	ENSMEUG00000006804	-	58	84.848	Notamacropus_eugenii
ENSAMXG00000001477	hnrnpd	90	78.523	ENSOPRG00000009336	HNRNPD	83	80.000	Ochotona_princeps
ENSAMXG00000001477	hnrnpd	90	85.000	ENSODEG00000001897	HNRNPD	88	86.879	Octodon_degus
ENSAMXG00000001477	hnrnpd	100	85.443	ENSONIG00000015390	hnrnpd	100	86.076	Oreochromis_niloticus
ENSAMXG00000001477	hnrnpd	87	85.769	ENSOANG00000001932	HNRNPD	100	87.692	Ornithorhynchus_anatinus
ENSAMXG00000001477	hnrnpd	87	83.026	ENSOCUG00000001357	HNRNPD	98	84.559	Oryctolagus_cuniculus
ENSAMXG00000001477	hnrnpd	100	79.180	ENSORLG00000001833	hnrnpd	100	81.073	Oryzias_latipes
ENSAMXG00000001477	hnrnpd	89	82.734	ENSORLG00020014780	hnrnpd	83	86.331	Oryzias_latipes_hni
ENSAMXG00000001477	hnrnpd	100	79.180	ENSORLG00015002382	hnrnpd	100	81.073	Oryzias_latipes_hsok
ENSAMXG00000001477	hnrnpd	100	76.341	ENSOMEG00000018558	hnrnpd	100	83.596	Oryzias_melastigma
ENSAMXG00000001477	hnrnpd	90	79.599	ENSOGAG00000004075	HNRNPD	84	81.395	Otolemur_garnettii
ENSAMXG00000001477	hnrnpd	87	83.026	ENSOARG00000000579	HNRNPD	98	84.871	Ovis_aries
ENSAMXG00000001477	hnrnpd	91	83.333	ENSPPAG00000035750	HNRNPD	100	85.854	Pan_paniscus
ENSAMXG00000001477	hnrnpd	90	85.000	ENSPPRG00000012258	HNRNPD	83	86.879	Panthera_pardus
ENSAMXG00000001477	hnrnpd	91	83.333	ENSPTIG00000019434	HNRNPD	98	86.879	Panthera_tigris_altaica
ENSAMXG00000001477	hnrnpd	90	85.000	ENSPTRG00000016215	HNRNPD	83	86.879	Pan_troglodytes
ENSAMXG00000001477	hnrnpd	90	85.000	ENSPANG00000011785	HNRNPD	83	86.879	Papio_anubis
ENSAMXG00000001477	hnrnpd	100	89.711	ENSPKIG00000025512	hnrnpd	100	89.711	Paramormyrops_kingsleyae
ENSAMXG00000001477	hnrnpd	69	84.951	ENSPSIG00000017029	HNRNPD	79	88.000	Pelodiscus_sinensis
ENSAMXG00000001477	hnrnpd	89	73.103	ENSPMGG00000017169	hnrnpd	85	77.200	Periophthalmus_magnuspinnatus
ENSAMXG00000001477	hnrnpd	91	80.142	ENSPEMG00000014804	Hnrnpd	85	84.559	Peromyscus_maniculatus_bairdii
ENSAMXG00000001477	hnrnpd	91	84.043	ENSPCIG00000003112	HNRNPD	77	86.691	Phascolarctos_cinereus
ENSAMXG00000001477	hnrnpd	100	81.703	ENSPFOG00000002596	hnrnpd	100	85.174	Poecilia_formosa
ENSAMXG00000001477	hnrnpd	100	81.703	ENSPLAG00000004297	hnrnpd	100	85.174	Poecilia_latipinna
ENSAMXG00000001477	hnrnpd	100	81.703	ENSPMEG00000000152	hnrnpd	100	85.174	Poecilia_mexicana
ENSAMXG00000001477	hnrnpd	88	90.769	ENSPREG00000018081	hnrnpd	95	90.385	Poecilia_reticulata
ENSAMXG00000001477	hnrnpd	61	73.810	ENSPPYG00000020411	-	90	70.345	Pongo_abelii
ENSAMXG00000001477	hnrnpd	90	79.599	ENSPPYG00000014885	HNRNPD	84	81.395	Pongo_abelii
ENSAMXG00000001477	hnrnpd	90	76.000	ENSPCAG00000002182	HNRNPD	84	80.132	Procavia_capensis
ENSAMXG00000001477	hnrnpd	90	85.000	ENSPCOG00000021331	HNRNPD	83	86.879	Propithecus_coquereli
ENSAMXG00000001477	hnrnpd	90	75.920	ENSPVAG00000000003	HNRNPD	84	79.070	Pteropus_vampyrus
ENSAMXG00000001477	hnrnpd	100	85.443	ENSPNYG00000004884	hnrnpd	100	86.076	Pundamilia_nyererei
ENSAMXG00000001477	hnrnpd	100	87.138	ENSPNAG00000016368	hnrnpd	100	91.318	Pygocentrus_nattereri
ENSAMXG00000001477	hnrnpd	91	84.397	ENSRNOG00000002292	Hnrnpd	84	86.170	Rattus_norvegicus
ENSAMXG00000001477	hnrnpd	90	85.000	ENSRBIG00000035345	HNRNPD	83	86.879	Rhinopithecus_bieti
ENSAMXG00000001477	hnrnpd	90	85.000	ENSRROG00000011888	HNRNPD	83	86.879	Rhinopithecus_roxellana
ENSAMXG00000001477	hnrnpd	90	85.000	ENSSBOG00000032881	HNRNPD	83	86.879	Saimiri_boliviensis_boliviensis
ENSAMXG00000001477	hnrnpd	87	83.026	ENSSHAG00000013312	HNRNPD	98	84.871	Sarcophilus_harrisii
ENSAMXG00000001477	hnrnpd	100	88.141	ENSSFOG00015005913	hnrnpd	100	87.500	Scleropages_formosus
ENSAMXG00000001477	hnrnpd	98	79.487	ENSSMAG00000009686	hnrnpd	88	89.643	Scophthalmus_maximus
ENSAMXG00000001477	hnrnpd	98	85.209	ENSSDUG00000010792	hnrnpd	88	92.473	Seriola_dumerili
ENSAMXG00000001477	hnrnpd	98	80.386	ENSSLDG00000015962	hnrnpd	88	91.039	Seriola_lalandi_dorsalis
ENSAMXG00000001477	hnrnpd	87	81.111	ENSSARG00000006883	HNRNPD	98	82.593	Sorex_araneus
ENSAMXG00000001477	hnrnpd	87	85.000	ENSSPUG00000013677	HNRNPD	100	81.716	Sphenodon_punctatus
ENSAMXG00000001477	hnrnpd	98	83.601	ENSSPAG00000021014	hnrnpd	88	93.548	Stegastes_partitus
ENSAMXG00000001477	hnrnpd	90	84.643	ENSSSCG00000009249	HNRNPD	83	86.525	Sus_scrofa
ENSAMXG00000001477	hnrnpd	88	80.479	ENSTGUG00000002858	HNRNPD	91	80.464	Taeniopygia_guttata
ENSAMXG00000001477	hnrnpd	96	81.457	ENSTRUG00000018450	hnrnpd	88	81.227	Takifugu_rubripes
ENSAMXG00000001477	hnrnpd	75	79.060	ENSTNIG00000013499	hnrnpd	89	86.047	Tetraodon_nigroviridis
ENSAMXG00000001477	hnrnpd	88	78.676	ENSTBEG00000002327	HNRNPD	98	80.515	Tupaia_belangeri
ENSAMXG00000001477	hnrnpd	90	77.258	ENSTTRG00000007592	HNRNPD	84	81.395	Tursiops_truncatus
ENSAMXG00000001477	hnrnpd	94	76.531	ENSUAMG00000011374	HNRNPD	73	84.871	Ursus_americanus
ENSAMXG00000001477	hnrnpd	87	81.181	ENSUMAG00000008685	HNRNPD	83	84.871	Ursus_maritimus
ENSAMXG00000001477	hnrnpd	87	85.441	ENSVPAG00000004374	HNRNPD	100	87.356	Vicugna_pacos
ENSAMXG00000001477	hnrnpd	90	77.258	ENSVVUG00000024658	HNRNPD	84	81.395	Vulpes_vulpes
ENSAMXG00000001477	hnrnpd	90	78.136	ENSXETG00000012569	hnrnpd	94	76.786	Xenopus_tropicalis
ENSAMXG00000001477	hnrnpd	96	85.385	ENSXCOG00000017639	hnrnpd	100	89.615	Xiphophorus_couchianus
ENSAMXG00000001477	hnrnpd	100	80.818	ENSXMAG00000019151	hnrnpd	100	84.277	Xiphophorus_maculatus