EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000001515 (Gene tree)
Gene ID: 103045881
Gene Symbol: larp4ab
Alias: larp4b
Full Name: la-related protein 4-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 17964 bases
Position: chr13:36625361-36643324
Accession: 103045881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000052882	La	PF05383.17	5e-17	1	1
ENSAMXP00000001537	La	PF05383.17	5.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000001537	-	6102	XM_007254242	ENSAMXP00000001537	769 (aa)	XP_007254304	W5K1S7
ENSAMXT00000050398	-	6060	XM_007254243	ENSAMXP00000052882	755 (aa)	XP_007254305	UPI000BBDACB5

Gene Model

Click here to download ENSAMXG00000001515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000001515's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000001515	larp4ab	95	56.186	ENSAMXG00000036493	larp4aa	100	53.545
ENSAMXG00000001515	larp4ab	86	37.827	ENSAMXG00000003335	larp4b	87	37.387

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000001515	larp4ab	86	61.993	ENSG00000161813	LARP4	74	81.295	Homo_sapiens
ENSAMXG00000001515	larp4ab	100	55.030	ENSAPOG00000007142	larp4aa	100	51.449	Acanthochromis_polyacanthus
ENSAMXG00000001515	larp4ab	95	51.044	ENSAPOG00000021331	larp4ab	100	49.017	Acanthochromis_polyacanthus
ENSAMXG00000001515	larp4ab	95	47.403	ENSAMEG00000001275	LARP4	99	46.255	Ailuropoda_melanoleuca
ENSAMXG00000001515	larp4ab	54	62.383	ENSACIG00000001198	larp4aa	78	90.714	Amphilophus_citrinellus
ENSAMXG00000001515	larp4ab	95	50.783	ENSAOCG00000006387	larp4ab	100	48.624	Amphiprion_ocellaris
ENSAMXG00000001515	larp4ab	100	55.260	ENSAOCG00000002408	larp4aa	100	50.725	Amphiprion_ocellaris
ENSAMXG00000001515	larp4ab	100	55.260	ENSAPEG00000019058	larp4aa	100	50.725	Amphiprion_percula
ENSAMXG00000001515	larp4ab	100	54.090	ENSATEG00000020715	larp4aa	100	50.614	Anabas_testudineus
ENSAMXG00000001515	larp4ab	95	51.634	ENSATEG00000001018	larp4ab	100	49.020	Anabas_testudineus
ENSAMXG00000001515	larp4ab	95	49.805	ENSAPLG00000013661	LARP4	99	48.124	Anas_platyrhynchos
ENSAMXG00000001515	larp4ab	95	48.771	ENSACAG00000017133	LARP4	96	45.548	Anolis_carolinensis
ENSAMXG00000001515	larp4ab	83	60.106	ENSANAG00000029342	LARP4	99	59.779	Aotus_nancymaae
ENSAMXG00000001515	larp4ab	100	52.563	ENSACLG00000002575	larp4aa	100	51.981	Astatotilapia_calliptera
ENSAMXG00000001515	larp4ab	83	60.106	ENSCJAG00000021131	LARP4	99	59.779	Callithrix_jacchus
ENSAMXG00000001515	larp4ab	95	46.718	ENSCAFG00000008174	LARP4	52	59.375	Canis_familiaris
ENSAMXG00000001515	larp4ab	89	60.204	ENSCAFG00020014554	LARP4	53	58.871	Canis_lupus_dingo
ENSAMXG00000001515	larp4ab	83	60.372	ENSTSYG00000004342	LARP4	74	58.047	Carlito_syrichta
ENSAMXG00000001515	larp4ab	94	39.866	ENSCAPG00000012942	LARP4	69	44.744	Cavia_aperea
ENSAMXG00000001515	larp4ab	95	44.572	ENSCPOG00000020519	LARP4	99	43.170	Cavia_porcellus
ENSAMXG00000001515	larp4ab	85	59.840	ENSCCAG00000024439	LARP4	99	59.410	Cebus_capucinus
ENSAMXG00000001515	larp4ab	95	44.980	ENSCATG00000044528	LARP4	71	50.667	Cercocebus_atys
ENSAMXG00000001515	larp4ab	95	47.539	ENSCLAG00000001829	LARP4	99	46.405	Chinchilla_lanigera
ENSAMXG00000001515	larp4ab	95	48.168	ENSCPBG00000019407	LARP4	90	47.104	Chrysemys_picta_bellii
ENSAMXG00000001515	larp4ab	95	42.726	ENSCANG00000033097	-	76	71.111	Colobus_angolensis_palliatus
ENSAMXG00000001515	larp4ab	83	61.170	ENSCANG00000029159	-	96	58.947	Colobus_angolensis_palliatus
ENSAMXG00000001515	larp4ab	95	47.619	ENSCGRG00001010818	Larp4	99	46.082	Cricetulus_griseus_chok1gshd
ENSAMXG00000001515	larp4ab	95	47.619	ENSCGRG00000009382	Larp4	100	46.082	Cricetulus_griseus_crigri
ENSAMXG00000001515	larp4ab	59	53.978	ENSCSEG00000003240	larp4ab	62	53.118	Cynoglossus_semilaevis
ENSAMXG00000001515	larp4ab	95	57.322	ENSCSEG00000001963	larp4aa	95	52.823	Cynoglossus_semilaevis
ENSAMXG00000001515	larp4ab	100	53.277	ENSCVAG00000005488	larp4aa	100	50.909	Cyprinodon_variegatus
ENSAMXG00000001515	larp4ab	95	67.031	ENSDARG00000074979	larp4ab	77	93.431	Danio_rerio
ENSAMXG00000001515	larp4ab	100	54.557	ENSDARG00000078401	larp4aa	100	54.647	Danio_rerio
ENSAMXG00000001515	larp4ab	95	46.952	ENSDNOG00000038525	LARP4	99	45.833	Dasypus_novemcinctus
ENSAMXG00000001515	larp4ab	95	44.560	ENSDORG00000004013	Larp4	70	49.906	Dipodomys_ordii
ENSAMXG00000001515	larp4ab	54	85.185	ENSETEG00000011683	LARP4	54	85.185	Echinops_telfairi
ENSAMXG00000001515	larp4ab	65	40.614	ENSEBUG00000004426	LARP4	73	44.368	Eptatretus_burgeri
ENSAMXG00000001515	larp4ab	69	41.071	ENSEBUG00000010394	LARP4	68	43.088	Eptatretus_burgeri
ENSAMXG00000001515	larp4ab	82	59.833	ENSEASG00005004356	LARP4	100	58.577	Equus_asinus_asinus
ENSAMXG00000001515	larp4ab	95	47.089	ENSECAG00000012479	LARP4	99	46.733	Equus_caballus
ENSAMXG00000001515	larp4ab	69	83.761	ENSEEUG00000000316	LARP4	56	83.761	Erinaceus_europaeus
ENSAMXG00000001515	larp4ab	95	49.418	ENSELUG00000000395	larp4aa	98	48.190	Esox_lucius
ENSAMXG00000001515	larp4ab	95	51.126	ENSELUG00000018650	larp4ab	99	49.732	Esox_lucius
ENSAMXG00000001515	larp4ab	90	59.333	ENSFCAG00000031897	LARP4	99	58.983	Felis_catus
ENSAMXG00000001515	larp4ab	80	50.076	ENSFALG00000002114	LARP4	95	49.381	Ficedula_albicollis
ENSAMXG00000001515	larp4ab	95	47.532	ENSFDAG00000006406	-	99	46.433	Fukomys_damarensis
ENSAMXG00000001515	larp4ab	95	47.537	ENSFHEG00000013854	larp4ab	99	43.925	Fundulus_heteroclitus
ENSAMXG00000001515	larp4ab	100	52.174	ENSFHEG00000004338	larp4aa	100	50.903	Fundulus_heteroclitus
ENSAMXG00000001515	larp4ab	100	51.003	ENSGMOG00000008246	larp4aa	100	48.519	Gadus_morhua
ENSAMXG00000001515	larp4ab	90	48.276	ENSGALG00000042122	LARP4	91	47.455	Gallus_gallus
ENSAMXG00000001515	larp4ab	95	47.211	ENSGAFG00000021777	larp4ab	72	49.013	Gambusia_affinis
ENSAMXG00000001515	larp4ab	99	52.816	ENSGACG00000008381	larp4aa	98	66.758	Gasterosteus_aculeatus
ENSAMXG00000001515	larp4ab	95	48.450	ENSGACG00000000680	larp4ab	99	48.373	Gasterosteus_aculeatus
ENSAMXG00000001515	larp4ab	95	48.458	ENSGAGG00000006969	LARP4	99	47.226	Gopherus_agassizii
ENSAMXG00000001515	larp4ab	95	45.752	ENSGGOG00000015230	LARP4	99	60.517	Gorilla_gorilla
ENSAMXG00000001515	larp4ab	100	53.109	ENSHBUG00000023074	larp4aa	100	52.120	Haplochromis_burtoni
ENSAMXG00000001515	larp4ab	87	47.844	ENSHGLG00000005513	-	99	47.183	Heterocephalus_glaber_female
ENSAMXG00000001515	larp4ab	50	52.051	ENSHGLG00000010979	-	77	52.139	Heterocephalus_glaber_female
ENSAMXG00000001515	larp4ab	81	47.913	ENSHGLG00000013875	-	94	46.774	Heterocephalus_glaber_female
ENSAMXG00000001515	larp4ab	95	45.644	ENSHGLG00100011678	-	99	43.775	Heterocephalus_glaber_male
ENSAMXG00000001515	larp4ab	50	52.051	ENSHGLG00100002832	-	77	52.139	Heterocephalus_glaber_male
ENSAMXG00000001515	larp4ab	95	47.233	ENSHGLG00100016984	-	99	46.401	Heterocephalus_glaber_male
ENSAMXG00000001515	larp4ab	95	47.028	ENSHCOG00000020857	larp4ab	100	44.987	Hippocampus_comes
ENSAMXG00000001515	larp4ab	100	51.578	ENSHCOG00000015951	larp4aa	100	50.367	Hippocampus_comes
ENSAMXG00000001515	larp4ab	95	61.357	ENSIPUG00000021659	larp4ab	99	58.069	Ictalurus_punctatus
ENSAMXG00000001515	larp4ab	97	55.058	ENSIPUG00000007514	larp4aa	99	52.393	Ictalurus_punctatus
ENSAMXG00000001515	larp4ab	95	46.623	ENSSTOG00000003553	LARP4	99	46.013	Ictidomys_tridecemlineatus
ENSAMXG00000001515	larp4ab	100	52.657	ENSKMAG00000006800	larp4aa	100	51.519	Kryptolebias_marmoratus
ENSAMXG00000001515	larp4ab	95	49.476	ENSKMAG00000018556	larp4ab	100	47.781	Kryptolebias_marmoratus
ENSAMXG00000001515	larp4ab	96	54.100	ENSLBEG00000014537	larp4aa	70	56.639	Labrus_bergylta
ENSAMXG00000001515	larp4ab	95	49.670	ENSLBEG00000019306	larp4ab	69	54.598	Labrus_bergylta
ENSAMXG00000001515	larp4ab	95	47.243	ENSLACG00000019090	LARP4	99	46.515	Latimeria_chalumnae
ENSAMXG00000001515	larp4ab	100	52.927	ENSLOCG00000007113	larp4ab	100	51.154	Lepisosteus_oculatus
ENSAMXG00000001515	larp4ab	95	46.484	ENSLAFG00000005160	LARP4	100	46.635	Loxodonta_africana
ENSAMXG00000001515	larp4ab	83	61.170	ENSMFAG00000043681	LARP4	96	58.947	Macaca_fascicularis
ENSAMXG00000001515	larp4ab	83	61.170	ENSMMUG00000008172	LARP4	96	58.947	Macaca_mulatta
ENSAMXG00000001515	larp4ab	94	45.576	ENSMNEG00000034602	LARP4	64	58.654	Macaca_nemestrina
ENSAMXG00000001515	larp4ab	75	59.184	ENSMNEG00000037799	-	77	66.667	Macaca_nemestrina
ENSAMXG00000001515	larp4ab	83	61.170	ENSMLEG00000039661	LARP4	67	61.255	Mandrillus_leucophaeus
ENSAMXG00000001515	larp4ab	95	49.541	ENSMAMG00000002616	larp4ab	70	53.471	Mastacembelus_armatus
ENSAMXG00000001515	larp4ab	95	55.138	ENSMAMG00000011206	larp4aa	100	50.659	Mastacembelus_armatus
ENSAMXG00000001515	larp4ab	100	52.745	ENSMZEG00005001813	larp4aa	100	51.981	Maylandia_zebra
ENSAMXG00000001515	larp4ab	90	48.290	ENSMGAG00000010598	LARP4	91	47.527	Meleagris_gallopavo
ENSAMXG00000001515	larp4ab	73	84.615	ENSMICG00000012388	-	97	84.615	Microcebus_murinus
ENSAMXG00000001515	larp4ab	95	43.947	ENSMICG00000030156	-	66	81.955	Microcebus_murinus
ENSAMXG00000001515	larp4ab	95	48.294	ENSMOCG00000020635	Larp4	99	46.429	Microtus_ochrogaster
ENSAMXG00000001515	larp4ab	95	47.897	ENSMMOG00000021861	larp4ab	97	55.526	Mola_mola
ENSAMXG00000001515	larp4ab	100	51.652	ENSMMOG00000004785	larp4aa	71	55.420	Mola_mola
ENSAMXG00000001515	larp4ab	97	47.194	ENSMPUG00000008706	LARP4	97	46.392	Mustela_putorius_furo
ENSAMXG00000001515	larp4ab	95	47.197	ENSMLUG00000012513	-	99	45.758	Myotis_lucifugus
ENSAMXG00000001515	larp4ab	95	45.119	ENSNGAG00000001577	-	99	45.828	Nannospalax_galili
ENSAMXG00000001515	larp4ab	100	53.397	ENSNBRG00000011292	larp4aa	100	51.741	Neolamprologus_brichardi
ENSAMXG00000001515	larp4ab	86	62.362	ENSNLEG00000017798	LARP4	96	58.947	Nomascus_leucogenys
ENSAMXG00000001515	larp4ab	95	47.900	ENSODEG00000009770	LARP4	73	53.107	Octodon_degus
ENSAMXG00000001515	larp4ab	95	46.335	ENSONIG00000019124	larp4ab	99	45.571	Oreochromis_niloticus
ENSAMXG00000001515	larp4ab	100	52.625	ENSONIG00000011895	larp4aa	100	50.856	Oreochromis_niloticus
ENSAMXG00000001515	larp4ab	66	54.511	ENSOANG00000004373	LARP4	92	53.019	Ornithorhynchus_anatinus
ENSAMXG00000001515	larp4ab	95	47.219	ENSOCUG00000021417	-	70	51.119	Oryctolagus_cuniculus
ENSAMXG00000001515	larp4ab	95	46.831	ENSOCUG00000026872	-	70	51.948	Oryctolagus_cuniculus
ENSAMXG00000001515	larp4ab	100	52.169	ENSORLG00000006758	larp4aa	100	50.549	Oryzias_latipes
ENSAMXG00000001515	larp4ab	100	52.106	ENSORLG00020010258	larp4aa	100	50.549	Oryzias_latipes_hni
ENSAMXG00000001515	larp4ab	100	52.106	ENSORLG00015002292	larp4aa	100	50.610	Oryzias_latipes_hsok
ENSAMXG00000001515	larp4ab	100	52.399	ENSOMEG00000019749	larp4aa	96	66.574	Oryzias_melastigma
ENSAMXG00000001515	larp4ab	66	49.442	ENSOGAG00000001415	LARP4	99	49.905	Otolemur_garnettii
ENSAMXG00000001515	larp4ab	71	58.824	ENSPPAG00000035100	LARP4	80	59.043	Pan_paniscus
ENSAMXG00000001515	larp4ab	90	59.333	ENSPPRG00000004522	LARP4	99	58.983	Panthera_pardus
ENSAMXG00000001515	larp4ab	90	59.333	ENSPTIG00000015617	LARP4	99	58.983	Panthera_tigris_altaica
ENSAMXG00000001515	larp4ab	86	61.993	ENSPTRG00000004935	LARP4	96	58.684	Pan_troglodytes
ENSAMXG00000001515	larp4ab	83	60.904	ENSPANG00000022964	LARP4	74	58.684	Papio_anubis
ENSAMXG00000001515	larp4ab	100	54.122	ENSPKIG00000005950	larp4ab	100	51.442	Paramormyrops_kingsleyae
ENSAMXG00000001515	larp4ab	96	48.072	ENSPSIG00000015867	LARP4	99	46.863	Pelodiscus_sinensis
ENSAMXG00000001515	larp4ab	95	49.211	ENSPCIG00000000384	LARP4	99	47.389	Phascolarctos_cinereus
ENSAMXG00000001515	larp4ab	100	53.421	ENSPFOG00000013148	larp4aa	100	50.850	Poecilia_formosa
ENSAMXG00000001515	larp4ab	95	47.190	ENSPFOG00000009764	larp4ab	99	44.329	Poecilia_formosa
ENSAMXG00000001515	larp4ab	100	52.574	ENSPLAG00000013626	larp4aa	100	50.494	Poecilia_latipinna
ENSAMXG00000001515	larp4ab	95	46.632	ENSPLAG00000008502	larp4ab	99	43.807	Poecilia_latipinna
ENSAMXG00000001515	larp4ab	100	53.301	ENSPMEG00000014271	larp4aa	100	50.850	Poecilia_mexicana
ENSAMXG00000001515	larp4ab	95	46.521	ENSPMEG00000002720	larp4ab	99	44.271	Poecilia_mexicana
ENSAMXG00000001515	larp4ab	100	53.244	ENSPREG00000022597	larp4aa	100	49.259	Poecilia_reticulata
ENSAMXG00000001515	larp4ab	51	58.477	ENSPPYG00000004512	-	99	51.515	Pongo_abelii
ENSAMXG00000001515	larp4ab	73	67.143	ENSPCAG00000003671	LARP4	79	65.455	Procavia_capensis
ENSAMXG00000001515	larp4ab	83	60.106	ENSPCOG00000026291	LARP4	96	57.632	Propithecus_coquereli
ENSAMXG00000001515	larp4ab	89	41.643	ENSPVAG00000016840	LARP4	64	47.761	Pteropus_vampyrus
ENSAMXG00000001515	larp4ab	100	52.563	ENSPNYG00000022265	larp4aa	100	51.981	Pundamilia_nyererei
ENSAMXG00000001515	larp4ab	100	78.590	ENSPNAG00000014478	larp4ab	99	80.323	Pygocentrus_nattereri
ENSAMXG00000001515	larp4ab	92	56.117	ENSPNAG00000024770	larp4aa	95	54.000	Pygocentrus_nattereri
ENSAMXG00000001515	larp4ab	86	62.362	ENSRBIG00000038857	-	99	61.255	Rhinopithecus_bieti
ENSAMXG00000001515	larp4ab	87	56.078	ENSRBIG00000036890	-	55	54.615	Rhinopithecus_bieti
ENSAMXG00000001515	larp4ab	83	61.170	ENSRROG00000042764	-	96	59.309	Rhinopithecus_roxellana
ENSAMXG00000001515	larp4ab	87	56.078	ENSRROG00000025487	-	89	54.178	Rhinopithecus_roxellana
ENSAMXG00000001515	larp4ab	83	59.309	ENSSBOG00000026650	LARP4	99	58.672	Saimiri_boliviensis_boliviensis
ENSAMXG00000001515	larp4ab	100	56.089	ENSSFOG00015014096	larp4ab	95	53.403	Scleropages_formosus
ENSAMXG00000001515	larp4ab	95	54.743	ENSSFOG00015003868	larp4aa	99	51.355	Scleropages_formosus
ENSAMXG00000001515	larp4ab	100	54.251	ENSSMAG00000019473	larp4aa	100	51.874	Scophthalmus_maximus
ENSAMXG00000001515	larp4ab	95	50.450	ENSSMAG00000002838	larp4ab	100	47.564	Scophthalmus_maximus
ENSAMXG00000001515	larp4ab	95	51.667	ENSSDUG00000006655	larp4ab	100	50.845	Seriola_dumerili
ENSAMXG00000001515	larp4ab	100	54.102	ENSSDUG00000010621	larp4aa	100	52.330	Seriola_dumerili
ENSAMXG00000001515	larp4ab	95	51.804	ENSSLDG00000001791	larp4ab	100	50.980	Seriola_lalandi_dorsalis
ENSAMXG00000001515	larp4ab	54	66.977	ENSSLDG00000004942	larp4aa	100	52.210	Seriola_lalandi_dorsalis
ENSAMXG00000001515	larp4ab	82	50.278	ENSSARG00000012469	LARP4	86	50.929	Sorex_araneus
ENSAMXG00000001515	larp4ab	90	47.139	ENSSPUG00000016552	LARP4	93	46.621	Sphenodon_punctatus
ENSAMXG00000001515	larp4ab	87	60.294	ENSSPAG00000007222	larp4aa	98	66.761	Stegastes_partitus
ENSAMXG00000001515	larp4ab	95	50.065	ENSSPAG00000002172	larp4ab	100	48.813	Stegastes_partitus
ENSAMXG00000001515	larp4ab	95	46.736	ENSSSCG00000028516	LARP4	99	46.325	Sus_scrofa
ENSAMXG00000001515	larp4ab	95	47.436	ENSTGUG00000003479	LARP4	99	47.028	Taeniopygia_guttata
ENSAMXG00000001515	larp4ab	66	52.319	ENSTRUG00000007206	larp4ab	100	45.419	Takifugu_rubripes
ENSAMXG00000001515	larp4ab	95	45.561	ENSTNIG00000014571	larp4ab	100	43.546	Tetraodon_nigroviridis
ENSAMXG00000001515	larp4ab	95	51.943	ENSTNIG00000015109	larp4aa	99	51.440	Tetraodon_nigroviridis
ENSAMXG00000001515	larp4ab	79	51.312	ENSTBEG00000005167	LARP4	62	50.292	Tupaia_belangeri
ENSAMXG00000001515	larp4ab	95	47.266	ENSTTRG00000003764	LARP4	53	59.045	Tursiops_truncatus
ENSAMXG00000001515	larp4ab	66	52.985	ENSUAMG00000013764	LARP4	97	52.852	Ursus_americanus
ENSAMXG00000001515	larp4ab	95	47.730	ENSUMAG00000008473	LARP4	99	46.719	Ursus_maritimus
ENSAMXG00000001515	larp4ab	95	45.223	ENSVPAG00000010136	LARP4	99	45.019	Vicugna_pacos
ENSAMXG00000001515	larp4ab	89	59.727	ENSVVUG00000024717	LARP4	62	71.111	Vulpes_vulpes
ENSAMXG00000001515	larp4ab	88	47.746	ENSXETG00000007283	larp4	91	48.869	Xenopus_tropicalis
ENSAMXG00000001515	larp4ab	100	52.632	ENSXCOG00000006387	larp4aa	100	49.017	Xiphophorus_couchianus
ENSAMXG00000001515	larp4ab	95	48.158	ENSXMAG00000002156	larp4ab	99	43.467	Xiphophorus_maculatus
ENSAMXG00000001515	larp4ab	100	54.227	ENSXMAG00000010519	larp4aa	100	50.852	Xiphophorus_maculatus