EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000001532 (Gene tree)
Gene ID: -
Gene Symbol: srsf7a
Alias: fb39b02|wu:fb39b02|zgc:77155
Full Name: serine/arginine-rich splicing factor 7-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 3236 bases
Position: chr3:13233719-13236954
Accession: 103046837
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000001558	zf-CCHC	PF00098.23	7.2e-05	1	1
ENSAMXP00000001558	RRM_1	PF00076.22	2.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000001558	-	732	XM_007260977	ENSAMXP00000001558	243 (aa)	XP_007261039	W5K1U8

Gene Model

Click here to download ENSAMXG00000001532's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000001532's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000001532	srsf7a	67	71.676	ENSAMXG00000031648	-	72	72.159

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000001532	srsf7a	51	83.333	ENSACIG00000004885	srsf7a	90	78.417	Amphilophus_citrinellus
ENSAMXG00000001532	srsf7a	51	56.349	ENSAOCG00000021499	srsf7b	83	55.172	Amphiprion_ocellaris
ENSAMXG00000001532	srsf7a	51	56.349	ENSAPEG00000018802	srsf7b	83	55.172	Amphiprion_percula
ENSAMXG00000001532	srsf7a	99	52.675	ENSANAG00000019399	SRSF7	89	74.590	Aotus_nancymaae
ENSAMXG00000001532	srsf7a	54	82.576	ENSCSEG00000006378	srsf7a	84	86.441	Cynoglossus_semilaevis
ENSAMXG00000001532	srsf7a	55	77.612	ENSCVAG00000020083	srsf7a	75	70.408	Cyprinodon_variegatus
ENSAMXG00000001532	srsf7a	96	65.854	ENSDARG00000035325	srsf7a	99	90.278	Danio_rerio
ENSAMXG00000001532	srsf7a	68	59.281	ENSDARG00000101057	srsf7b	80	72.131	Danio_rerio
ENSAMXG00000001532	srsf7a	67	47.929	ENSEBUG00000004324	-	73	50.595	Eptatretus_burgeri
ENSAMXG00000001532	srsf7a	51	84.000	ENSELUG00000016922	srsf7a	78	89.908	Esox_lucius
ENSAMXG00000001532	srsf7a	79	62.500	ENSFHEG00000007159	srsf7a	63	87.288	Fundulus_heteroclitus
ENSAMXG00000001532	srsf7a	96	54.000	ENSGMOG00000002004	srsf7a	81	72.632	Gadus_morhua
ENSAMXG00000001532	srsf7a	50	70.161	ENSGAFG00000008856	srsf7b	80	75.676	Gambusia_affinis
ENSAMXG00000001532	srsf7a	59	46.528	ENSHGLG00000015682	-	92	46.296	Heterocephalus_glaber_female
ENSAMXG00000001532	srsf7a	79	64.249	ENSHCOG00000016135	srsf7a	80	70.256	Hippocampus_comes
ENSAMXG00000001532	srsf7a	50	93.443	ENSIPUG00000019088	srsf7a	59	87.151	Ictalurus_punctatus
ENSAMXG00000001532	srsf7a	69	68.966	ENSIPUG00000007928	-	75	68.889	Ictalurus_punctatus
ENSAMXG00000001532	srsf7a	51	56.452	ENSLACG00000008131	SRSF3	92	53.165	Latimeria_chalumnae
ENSAMXG00000001532	srsf7a	61	49.007	ENSMAUG00000011430	-	56	58.824	Mesocricetus_auratus
ENSAMXG00000001532	srsf7a	51	70.635	ENSMOCG00000022763	-	70	66.667	Microtus_ochrogaster
ENSAMXG00000001532	srsf7a	51	82.540	ENSNBRG00000006601	srsf7a	90	77.698	Neolamprologus_brichardi
ENSAMXG00000001532	srsf7a	50	74.797	ENSOARG00000008771	SRSF7	70	63.158	Ovis_aries
ENSAMXG00000001532	srsf7a	59	67.808	ENSPKIG00000017425	srsf7b	69	73.770	Paramormyrops_kingsleyae
ENSAMXG00000001532	srsf7a	68	70.391	ENSPKIG00000008209	-	71	68.912	Paramormyrops_kingsleyae
ENSAMXG00000001532	srsf7a	50	86.992	ENSPREG00000020685	srsf7a	93	86.667	Poecilia_reticulata
ENSAMXG00000001532	srsf7a	50	94.262	ENSPNAG00000012288	srsf7a	71	80.791	Pygocentrus_nattereri
ENSAMXG00000001532	srsf7a	50	70.732	ENSSDUG00000021338	srsf7b	85	70.492	Seriola_dumerili
ENSAMXG00000001532	srsf7a	50	69.919	ENSSLDG00000021463	srsf7b	69	70.492	Seriola_lalandi_dorsalis
ENSAMXG00000001532	srsf7a	96	66.383	ENSTNIG00000014279	srsf7a	80	64.615	Tetraodon_nigroviridis
ENSAMXG00000001532	srsf7a	53	59.231	ENSUMAG00000023107	-	59	73.684	Ursus_maritimus
ENSAMXG00000001532	srsf7a	57	53.147	ENSVVUG00000006092	-	67	61.429	Vulpes_vulpes
ENSAMXG00000001532	srsf7a	51	68.504	ENSXCOG00000010843	srsf7b	83	71.311	Xiphophorus_couchianus