EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000001626 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 1083 bases
Position: chrAPWO02000052.1:2204350-2205432
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000001664	zf-C2H2	PF00096.26	2.9e-71	1	11
ENSAMXP00000001664	zf-C2H2	PF00096.26	2.9e-71	2	11
ENSAMXP00000001664	zf-C2H2	PF00096.26	2.9e-71	3	11
ENSAMXP00000001664	zf-C2H2	PF00096.26	2.9e-71	4	11
ENSAMXP00000001664	zf-C2H2	PF00096.26	2.9e-71	5	11
ENSAMXP00000001664	zf-C2H2	PF00096.26	2.9e-71	6	11
ENSAMXP00000001664	zf-C2H2	PF00096.26	2.9e-71	7	11
ENSAMXP00000001664	zf-C2H2	PF00096.26	2.9e-71	8	11
ENSAMXP00000001664	zf-C2H2	PF00096.26	2.9e-71	9	11
ENSAMXP00000001664	zf-C2H2	PF00096.26	2.9e-71	10	11
ENSAMXP00000001664	zf-C2H2	PF00096.26	2.9e-71	11	11
ENSAMXP00000001664	zf-met	PF12874.7	4.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000001664	-	1083	-	ENSAMXP00000001664	360 (aa)	-	W5K254

Gene Model

Click here to download ENSAMXG00000001626's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000001626's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000001626	-	99	70.940	ENSAMXG00000004610	-	99	70.638
ENSAMXG00000001626	-	93	60.896	ENSAMXG00000043978	-	88	60.896
ENSAMXG00000001626	-	95	67.293	ENSAMXG00000036233	-	85	67.293
ENSAMXG00000001626	-	92	72.876	ENSAMXG00000039162	-	94	72.876
ENSAMXG00000001626	-	95	41.844	ENSAMXG00000006669	GFI1	59	41.844
ENSAMXG00000001626	-	94	71.028	ENSAMXG00000032457	-	91	71.028
ENSAMXG00000001626	-	95	47.436	ENSAMXG00000015228	-	58	47.436
ENSAMXG00000001626	-	98	62.857	ENSAMXG00000043291	-	90	62.857
ENSAMXG00000001626	-	96	70.312	ENSAMXG00000010078	-	87	70.312
ENSAMXG00000001626	-	98	61.947	ENSAMXG00000044110	-	90	61.947
ENSAMXG00000001626	-	89	42.000	ENSAMXG00000034158	scrt2	53	42.000
ENSAMXG00000001626	-	98	64.211	ENSAMXG00000035683	-	94	64.211
ENSAMXG00000001626	-	98	69.906	ENSAMXG00000036567	-	75	69.906
ENSAMXG00000001626	-	92	67.601	ENSAMXG00000029828	-	97	67.601
ENSAMXG00000001626	-	95	66.559	ENSAMXG00000040212	-	85	66.559
ENSAMXG00000001626	-	99	62.676	ENSAMXG00000003002	-	95	62.676
ENSAMXG00000001626	-	97	49.858	ENSAMXG00000030659	-	84	49.858
ENSAMXG00000001626	-	94	64.706	ENSAMXG00000042593	-	93	64.706
ENSAMXG00000001626	-	98	65.397	ENSAMXG00000010930	-	81	65.397
ENSAMXG00000001626	-	95	63.052	ENSAMXG00000036257	-	93	63.052
ENSAMXG00000001626	-	93	60.417	ENSAMXG00000040806	-	90	55.615
ENSAMXG00000001626	-	91	45.833	ENSAMXG00000044096	-	79	45.833
ENSAMXG00000001626	-	96	63.551	ENSAMXG00000037717	-	96	63.551
ENSAMXG00000001626	-	92	56.805	ENSAMXG00000039881	-	81	56.790
ENSAMXG00000001626	-	94	68.342	ENSAMXG00000031646	-	98	68.342
ENSAMXG00000001626	-	90	40.000	ENSAMXG00000044034	-	58	40.000
ENSAMXG00000001626	-	98	42.331	ENSAMXG00000014745	-	82	46.078
ENSAMXG00000001626	-	97	58.268	ENSAMXG00000043302	-	73	58.268
ENSAMXG00000001626	-	93	63.050	ENSAMXG00000039977	-	91	63.050
ENSAMXG00000001626	-	99	65.257	ENSAMXG00000031794	-	99	65.257
ENSAMXG00000001626	-	98	67.197	ENSAMXG00000039004	-	90	67.197
ENSAMXG00000001626	-	97	66.562	ENSAMXG00000037923	-	99	66.562
ENSAMXG00000001626	-	94	38.906	ENSAMXG00000024907	znf319b	86	38.906
ENSAMXG00000001626	-	94	63.636	ENSAMXG00000037981	-	79	63.636
ENSAMXG00000001626	-	99	58.101	ENSAMXG00000042633	-	98	58.101
ENSAMXG00000001626	-	99	60.204	ENSAMXG00000043019	-	93	60.204
ENSAMXG00000001626	-	98	64.955	ENSAMXG00000009776	-	98	64.955
ENSAMXG00000001626	-	94	72.508	ENSAMXG00000039744	-	99	72.508
ENSAMXG00000001626	-	95	65.385	ENSAMXG00000033124	-	56	65.385
ENSAMXG00000001626	-	98	41.935	ENSAMXG00000033299	-	71	41.935
ENSAMXG00000001626	-	99	63.905	ENSAMXG00000039432	-	99	63.905
ENSAMXG00000001626	-	92	32.381	ENSAMXG00000038507	-	78	32.381
ENSAMXG00000001626	-	98	60.748	ENSAMXG00000017959	-	94	60.748
ENSAMXG00000001626	-	86	70.357	ENSAMXG00000011804	-	86	70.357
ENSAMXG00000001626	-	98	61.564	ENSAMXG00000035875	-	99	61.564
ENSAMXG00000001626	-	92	66.352	ENSAMXG00000039016	-	77	66.352
ENSAMXG00000001626	-	93	33.043	ENSAMXG00000005882	znf131	53	32.584
ENSAMXG00000001626	-	97	71.340	ENSAMXG00000024978	-	96	71.340
ENSAMXG00000001626	-	99	46.409	ENSAMXG00000035246	-	75	46.409
ENSAMXG00000001626	-	96	70.000	ENSAMXG00000025455	-	99	70.000
ENSAMXG00000001626	-	100	42.353	ENSAMXG00000007441	-	68	52.055
ENSAMXG00000001626	-	98	65.273	ENSAMXG00000038453	-	82	65.273
ENSAMXG00000001626	-	95	47.020	ENSAMXG00000034934	-	93	47.020
ENSAMXG00000001626	-	97	62.434	ENSAMXG00000019489	-	93	62.434
ENSAMXG00000001626	-	98	61.398	ENSAMXG00000044028	-	98	61.398
ENSAMXG00000001626	-	98	61.429	ENSAMXG00000037326	-	96	55.247
ENSAMXG00000001626	-	99	57.059	ENSAMXG00000034096	-	87	58.537
ENSAMXG00000001626	-	94	50.196	ENSAMXG00000035127	-	95	50.196
ENSAMXG00000001626	-	97	72.727	ENSAMXG00000007092	-	99	72.727
ENSAMXG00000001626	-	92	61.794	ENSAMXG00000036633	-	67	55.182
ENSAMXG00000001626	-	95	50.613	ENSAMXG00000034857	-	64	50.613
ENSAMXG00000001626	-	96	68.421	ENSAMXG00000009558	-	93	68.421
ENSAMXG00000001626	-	89	60.436	ENSAMXG00000013274	-	97	57.349
ENSAMXG00000001626	-	96	67.347	ENSAMXG00000030911	-	80	67.347
ENSAMXG00000001626	-	98	58.544	ENSAMXG00000009563	-	98	60.681
ENSAMXG00000001626	-	99	58.380	ENSAMXG00000029960	-	98	58.380
ENSAMXG00000001626	-	92	65.297	ENSAMXG00000033013	-	81	65.297
ENSAMXG00000001626	-	98	39.130	ENSAMXG00000035525	znf646	89	39.130
ENSAMXG00000001626	-	91	48.598	ENSAMXG00000012589	-	83	48.598
ENSAMXG00000001626	-	98	57.679	ENSAMXG00000026144	-	92	57.679
ENSAMXG00000001626	-	92	68.580	ENSAMXG00000041128	-	86	68.580
ENSAMXG00000001626	-	91	67.550	ENSAMXG00000038636	-	93	67.550
ENSAMXG00000001626	-	92	69.333	ENSAMXG00000035920	-	92	69.333
ENSAMXG00000001626	-	96	68.259	ENSAMXG00000017609	-	83	67.752
ENSAMXG00000001626	-	95	57.600	ENSAMXG00000038905	-	91	57.600
ENSAMXG00000001626	-	96	64.026	ENSAMXG00000041609	-	96	68.000
ENSAMXG00000001626	-	95	43.882	ENSAMXG00000033252	-	99	43.882
ENSAMXG00000001626	-	97	58.750	ENSAMXG00000039770	-	84	58.750
ENSAMXG00000001626	-	95	62.016	ENSAMXG00000030530	-	99	64.596
ENSAMXG00000001626	-	96	64.759	ENSAMXG00000032619	-	98	64.759
ENSAMXG00000001626	-	99	63.636	ENSAMXG00000042167	-	91	63.636
ENSAMXG00000001626	-	92	40.741	ENSAMXG00000042191	zbtb47a	70	40.741
ENSAMXG00000001626	-	94	56.299	ENSAMXG00000034344	-	79	56.299
ENSAMXG00000001626	-	90	69.159	ENSAMXG00000031900	-	94	69.159
ENSAMXG00000001626	-	96	70.846	ENSAMXG00000031501	-	89	70.846
ENSAMXG00000001626	-	99	63.609	ENSAMXG00000040630	-	96	68.992
ENSAMXG00000001626	-	94	58.357	ENSAMXG00000037143	-	95	61.850
ENSAMXG00000001626	-	98	69.159	ENSAMXG00000031009	-	88	69.159
ENSAMXG00000001626	-	98	70.093	ENSAMXG00000029178	-	97	70.093
ENSAMXG00000001626	-	98	65.644	ENSAMXG00000034847	-	88	65.644
ENSAMXG00000001626	-	91	35.849	ENSAMXG00000002273	patz1	53	31.837
ENSAMXG00000001626	-	99	60.633	ENSAMXG00000039700	-	95	60.633
ENSAMXG00000001626	-	96	43.077	ENSAMXG00000033001	-	53	43.077
ENSAMXG00000001626	-	93	59.164	ENSAMXG00000038536	-	80	59.164
ENSAMXG00000001626	-	96	62.305	ENSAMXG00000039752	-	91	62.305
ENSAMXG00000001626	-	98	52.679	ENSAMXG00000043178	-	75	52.679
ENSAMXG00000001626	-	97	73.209	ENSAMXG00000025965	-	94	73.209
ENSAMXG00000001626	-	98	59.162	ENSAMXG00000043541	-	95	59.162
ENSAMXG00000001626	-	95	56.863	ENSAMXG00000035286	si:ch1073-224n8.1	92	41.729
ENSAMXG00000001626	-	92	59.799	ENSAMXG00000032841	-	84	59.799
ENSAMXG00000001626	-	90	39.535	ENSAMXG00000032845	-	56	39.306
ENSAMXG00000001626	-	98	67.692	ENSAMXG00000000353	-	94	67.692
ENSAMXG00000001626	-	96	70.695	ENSAMXG00000037885	-	97	70.695
ENSAMXG00000001626	-	94	61.468	ENSAMXG00000034402	-	93	61.468
ENSAMXG00000001626	-	99	67.290	ENSAMXG00000034958	-	94	67.290
ENSAMXG00000001626	-	94	39.631	ENSAMXG00000029059	-	75	39.631
ENSAMXG00000001626	-	96	52.632	ENSAMXG00000034333	-	88	52.632
ENSAMXG00000001626	-	98	63.240	ENSAMXG00000040677	-	98	63.240
ENSAMXG00000001626	-	98	64.130	ENSAMXG00000029109	-	87	64.130
ENSAMXG00000001626	-	96	58.735	ENSAMXG00000032237	-	96	58.735
ENSAMXG00000001626	-	98	66.883	ENSAMXG00000037760	-	96	66.883
ENSAMXG00000001626	-	98	63.863	ENSAMXG00000035437	-	99	63.863
ENSAMXG00000001626	-	96	71.299	ENSAMXG00000041404	-	96	71.340
ENSAMXG00000001626	-	92	71.239	ENSAMXG00000037703	-	81	71.239
ENSAMXG00000001626	-	92	47.674	ENSAMXG00000037382	-	91	42.647
ENSAMXG00000001626	-	96	65.909	ENSAMXG00000008613	-	96	65.909
ENSAMXG00000001626	-	98	70.091	ENSAMXG00000036762	-	93	70.091
ENSAMXG00000001626	-	96	64.444	ENSAMXG00000031496	-	90	64.444
ENSAMXG00000001626	-	94	66.667	ENSAMXG00000031489	-	93	67.524
ENSAMXG00000001626	-	94	60.484	ENSAMXG00000012873	-	94	60.484
ENSAMXG00000001626	-	92	67.296	ENSAMXG00000030963	-	56	67.296
ENSAMXG00000001626	-	90	34.535	ENSAMXG00000039622	zbtb41	51	38.764
ENSAMXG00000001626	-	97	60.000	ENSAMXG00000042174	-	92	57.413
ENSAMXG00000001626	-	96	52.825	ENSAMXG00000038325	-	97	54.520
ENSAMXG00000001626	-	98	64.653	ENSAMXG00000030742	-	99	64.653
ENSAMXG00000001626	-	92	67.556	ENSAMXG00000035145	-	64	67.556
ENSAMXG00000001626	-	95	46.512	ENSAMXG00000025761	-	89	38.298
ENSAMXG00000001626	-	99	64.982	ENSAMXG00000042938	-	92	64.982
ENSAMXG00000001626	-	99	61.564	ENSAMXG00000038324	-	81	61.564
ENSAMXG00000001626	-	96	69.196	ENSAMXG00000033500	-	92	67.069
ENSAMXG00000001626	-	98	51.266	ENSAMXG00000013492	-	98	50.000
ENSAMXG00000001626	-	92	69.486	ENSAMXG00000043251	-	95	69.486
ENSAMXG00000001626	-	94	62.069	ENSAMXG00000029783	-	90	54.440
ENSAMXG00000001626	-	98	60.436	ENSAMXG00000036915	-	97	60.436
ENSAMXG00000001626	-	96	60.870	ENSAMXG00000010805	-	99	60.870
ENSAMXG00000001626	-	99	56.627	ENSAMXG00000038284	-	95	58.133
ENSAMXG00000001626	-	93	59.935	ENSAMXG00000038280	-	88	59.935
ENSAMXG00000001626	-	92	68.508	ENSAMXG00000038156	-	61	68.508
ENSAMXG00000001626	-	89	54.430	ENSAMXG00000038122	-	94	54.430
ENSAMXG00000001626	-	93	67.391	ENSAMXG00000029518	-	55	67.391
ENSAMXG00000001626	-	96	61.468	ENSAMXG00000039408	-	94	61.468
ENSAMXG00000001626	-	89	73.077	ENSAMXG00000035949	-	74	73.077
ENSAMXG00000001626	-	89	39.474	ENSAMXG00000038235	snai2	52	39.474
ENSAMXG00000001626	-	95	61.438	ENSAMXG00000031844	-	90	61.438
ENSAMXG00000001626	-	100	58.182	ENSAMXG00000044107	-	87	58.182
ENSAMXG00000001626	-	98	55.085	ENSAMXG00000042746	-	83	55.398
ENSAMXG00000001626	-	94	71.299	ENSAMXG00000018161	-	96	71.299
ENSAMXG00000001626	-	98	57.949	ENSAMXG00000012604	-	97	57.949
ENSAMXG00000001626	-	96	69.333	ENSAMXG00000041975	-	80	69.333
ENSAMXG00000001626	-	96	65.242	ENSAMXG00000043423	-	79	65.242
ENSAMXG00000001626	-	93	36.562	ENSAMXG00000041864	prdm5	91	36.562
ENSAMXG00000001626	-	97	69.767	ENSAMXG00000041861	-	91	69.767
ENSAMXG00000001626	-	98	44.958	ENSAMXG00000041862	-	95	44.958
ENSAMXG00000001626	-	96	70.395	ENSAMXG00000042774	-	97	70.395
ENSAMXG00000001626	-	96	68.478	ENSAMXG00000035690	-	74	68.478
ENSAMXG00000001626	-	95	63.107	ENSAMXG00000036849	-	80	63.107
ENSAMXG00000001626	-	98	64.596	ENSAMXG00000032212	-	86	64.596
ENSAMXG00000001626	-	90	43.056	ENSAMXG00000034873	-	80	43.056
ENSAMXG00000001626	-	92	65.018	ENSAMXG00000039182	-	76	64.057
ENSAMXG00000001626	-	92	59.036	ENSAMXG00000026143	-	97	59.036
ENSAMXG00000001626	-	97	66.766	ENSAMXG00000025452	-	98	66.766
ENSAMXG00000001626	-	94	48.718	ENSAMXG00000007973	-	91	48.020
ENSAMXG00000001626	-	98	69.159	ENSAMXG00000041865	-	95	69.159
ENSAMXG00000001626	-	91	72.781	ENSAMXG00000029878	-	92	72.781
ENSAMXG00000001626	-	99	63.444	ENSAMXG00000042275	-	94	63.444
ENSAMXG00000001626	-	98	71.340	ENSAMXG00000039879	-	97	71.340
ENSAMXG00000001626	-	93	59.314	ENSAMXG00000029161	-	82	59.314
ENSAMXG00000001626	-	95	62.500	ENSAMXG00000036241	-	90	53.994
ENSAMXG00000001626	-	96	61.272	ENSAMXG00000031307	-	73	61.272
ENSAMXG00000001626	-	97	62.051	ENSAMXG00000041650	-	93	62.051
ENSAMXG00000001626	-	99	60.060	ENSAMXG00000033201	-	95	61.012
ENSAMXG00000001626	-	98	51.039	ENSAMXG00000042784	-	97	57.303
ENSAMXG00000001626	-	96	70.093	ENSAMXG00000035809	-	99	70.093
ENSAMXG00000001626	-	89	61.574	ENSAMXG00000037709	-	81	61.574
ENSAMXG00000001626	-	94	66.456	ENSAMXG00000041721	-	70	66.456
ENSAMXG00000001626	-	92	68.551	ENSAMXG00000041725	-	91	68.551
ENSAMXG00000001626	-	99	61.027	ENSAMXG00000026142	-	96	61.027

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000001626	-	91	50.621	ENSAPLG00000012660	-	81	50.621	Anas_platyrhynchos
ENSAMXG00000001626	-	98	55.882	ENSEASG00005020341	-	96	57.321	Equus_asinus_asinus
ENSAMXG00000001626	-	98	55.882	ENSECAG00000017293	-	96	57.321	Equus_caballus
ENSAMXG00000001626	-	98	54.206	ENSECAG00000039445	-	95	54.206	Equus_caballus
ENSAMXG00000001626	-	90	58.871	ENSGAGG00000009739	-	99	58.871	Gopherus_agassizii
ENSAMXG00000001626	-	94	59.494	ENSGAGG00000008773	-	89	58.462	Gopherus_agassizii
ENSAMXG00000001626	-	95	63.473	ENSGAGG00000006683	-	99	63.473	Gopherus_agassizii
ENSAMXG00000001626	-	96	59.922	ENSGAGG00000004740	-	90	58.115	Gopherus_agassizii
ENSAMXG00000001626	-	93	55.344	ENSGAGG00000015451	-	88	55.344	Gopherus_agassizii
ENSAMXG00000001626	-	92	58.687	ENSGAGG00000011574	-	78	58.687	Gopherus_agassizii
ENSAMXG00000001626	-	96	57.231	ENSGAGG00000006960	-	78	57.231	Gopherus_agassizii
ENSAMXG00000001626	-	94	56.401	ENSGAGG00000019349	-	78	56.401	Gopherus_agassizii
ENSAMXG00000001626	-	94	55.133	ENSGAGG00000000971	-	92	55.133	Gopherus_agassizii
ENSAMXG00000001626	-	96	58.784	ENSGAGG00000017986	-	94	58.784	Gopherus_agassizii
ENSAMXG00000001626	-	93	65.863	ENSIPUG00000015177	-	66	65.863	Ictalurus_punctatus
ENSAMXG00000001626	-	97	63.438	ENSIPUG00000015400	-	96	65.337	Ictalurus_punctatus
ENSAMXG00000001626	-	97	54.829	ENSMPUG00000008437	-	89	54.829	Mustela_putorius_furo
ENSAMXG00000001626	-	97	57.632	ENSPTIG00000009259	-	97	57.632	Panthera_tigris_altaica
ENSAMXG00000001626	-	92	56.790	ENSPSIG00000016247	-	53	56.790	Pelodiscus_sinensis
ENSAMXG00000001626	-	98	62.154	ENSPNAG00000012366	-	92	59.714	Pygocentrus_nattereri
ENSAMXG00000001626	-	90	64.253	ENSPNAG00000017455	-	77	64.253	Pygocentrus_nattereri
ENSAMXG00000001626	-	97	65.164	ENSPNAG00000012138	-	94	65.164	Pygocentrus_nattereri
ENSAMXG00000001626	-	96	60.550	ENSPNAG00000021942	-	93	60.550	Pygocentrus_nattereri
ENSAMXG00000001626	-	95	70.418	ENSPNAG00000018471	-	77	70.418	Pygocentrus_nattereri
ENSAMXG00000001626	-	94	55.082	ENSPNAG00000029386	-	91	55.082	Pygocentrus_nattereri
ENSAMXG00000001626	-	89	65.217	ENSPNAG00000000783	-	86	61.017	Pygocentrus_nattereri
ENSAMXG00000001626	-	95	59.216	ENSPNAG00000024704	-	94	55.516	Pygocentrus_nattereri
ENSAMXG00000001626	-	98	58.947	ENSPNAG00000028765	-	87	65.179	Pygocentrus_nattereri
ENSAMXG00000001626	-	92	62.681	ENSPNAG00000017479	-	86	62.462	Pygocentrus_nattereri
ENSAMXG00000001626	-	97	69.159	ENSPNAG00000003526	-	83	69.159	Pygocentrus_nattereri
ENSAMXG00000001626	-	92	65.801	ENSPNAG00000007072	-	93	65.801	Pygocentrus_nattereri
ENSAMXG00000001626	-	99	64.231	ENSPNAG00000003919	-	97	64.231	Pygocentrus_nattereri
ENSAMXG00000001626	-	99	66.792	ENSPNAG00000016045	-	74	68.103	Pygocentrus_nattereri
ENSAMXG00000001626	-	94	67.361	ENSPNAG00000008653	-	96	67.361	Pygocentrus_nattereri
ENSAMXG00000001626	-	98	65.000	ENSPNAG00000002287	-	99	65.000	Pygocentrus_nattereri
ENSAMXG00000001626	-	97	64.672	ENSPNAG00000005914	-	76	66.767	Pygocentrus_nattereri
ENSAMXG00000001626	-	84	68.627	ENSPNAG00000016025	-	89	68.627	Pygocentrus_nattereri
ENSAMXG00000001626	-	96	68.093	ENSPNAG00000018437	-	79	68.093	Pygocentrus_nattereri
ENSAMXG00000001626	-	90	53.763	ENSUAMG00000027415	-	85	53.763	Ursus_americanus
ENSAMXG00000001626	-	94	54.848	ENSUAMG00000027384	-	87	53.846	Ursus_americanus
ENSAMXG00000001626	-	95	56.698	ENSVPAG00000002698	-	100	56.698	Vicugna_pacos