EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000001662 (Gene tree)
Gene ID: 103042759
Gene Symbol: si:ch73-21k16.4
Alias: -
Full Name: G-patch domain containing 2
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 31656 bases
Position: chr3:23845926-23877581
Accession: 103042759
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000001683	G-patch	PF01585.23	3e-16	1	1
ENSAMXP00000028647	G-patch	PF01585.23	3.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000039481	-	1794	XM_007260448	ENSAMXP00000028647	497 (aa)	XP_007260510	UPI000BBDBD72
ENSAMXT00000001683	-	1748	-	ENSAMXP00000001683	496 (aa)	-	W5K273
ENSAMXT00000046339	-	3588	-	ENSAMXP00000033561	482 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000001662's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000001662's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000001662	si:ch73-21k16.4	99	55.932	ENSG00000092978	GPATCH2	97	54.802	Homo_sapiens
ENSAMXG00000001662	si:ch73-21k16.4	99	55.598	ENSAMEG00000000532	GPATCH2	97	54.735	Ailuropoda_melanoleuca
ENSAMXG00000001662	si:ch73-21k16.4	100	65.465	ENSACIG00000017628	si:ch73-21k16.4	100	65.655	Amphilophus_citrinellus
ENSAMXG00000001662	si:ch73-21k16.4	96	64.343	ENSAOCG00000020838	si:ch73-21k16.4	100	64.356	Amphiprion_ocellaris
ENSAMXG00000001662	si:ch73-21k16.4	100	70.398	ENSAPEG00000007324	si:ch73-21k16.4	100	70.943	Amphiprion_percula
ENSAMXG00000001662	si:ch73-21k16.4	100	64.030	ENSATEG00000003701	si:ch73-21k16.4	100	64.595	Anabas_testudineus
ENSAMXG00000001662	si:ch73-21k16.4	97	58.498	ENSAPLG00000005559	GPATCH2	99	57.510	Anas_platyrhynchos
ENSAMXG00000001662	si:ch73-21k16.4	97	55.750	ENSACAG00000014945	GPATCH2	93	54.864	Anolis_carolinensis
ENSAMXG00000001662	si:ch73-21k16.4	99	56.415	ENSANAG00000032851	GPATCH2	97	55.283	Aotus_nancymaae
ENSAMXG00000001662	si:ch73-21k16.4	100	69.794	ENSACLG00000008706	si:ch73-21k16.4	100	69.981	Astatotilapia_calliptera
ENSAMXG00000001662	si:ch73-21k16.4	99	56.061	ENSBTAG00000001574	GPATCH2	97	54.924	Bos_taurus
ENSAMXG00000001662	si:ch73-21k16.4	99	55.849	ENSCJAG00000047537	GPATCH2	88	54.802	Callithrix_jacchus
ENSAMXG00000001662	si:ch73-21k16.4	99	55.977	ENSCAFG00000010781	GPATCH2	97	55.218	Canis_familiaris
ENSAMXG00000001662	si:ch73-21k16.4	99	55.871	ENSCHIG00000018042	GPATCH2	97	54.735	Capra_hircus
ENSAMXG00000001662	si:ch73-21k16.4	96	56.385	ENSCAPG00000007843	GPATCH2	96	55.403	Cavia_aperea
ENSAMXG00000001662	si:ch73-21k16.4	99	55.660	ENSCPOG00000003966	GPATCH2	97	54.717	Cavia_porcellus
ENSAMXG00000001662	si:ch73-21k16.4	99	56.038	ENSCCAG00000010195	GPATCH2	97	54.991	Cebus_capucinus
ENSAMXG00000001662	si:ch73-21k16.4	99	56.455	ENSCATG00000038238	GPATCH2	96	55.299	Cercocebus_atys
ENSAMXG00000001662	si:ch73-21k16.4	99	55.556	ENSCLAG00000009274	GPATCH2	97	54.614	Chinchilla_lanigera
ENSAMXG00000001662	si:ch73-21k16.4	99	57.333	ENSCPBG00000013037	GPATCH2	99	56.571	Chrysemys_picta_bellii
ENSAMXG00000001662	si:ch73-21k16.4	99	55.932	ENSCANG00000031261	GPATCH2	97	54.802	Colobus_angolensis_palliatus
ENSAMXG00000001662	si:ch73-21k16.4	97	57.310	ENSCGRG00001024577	Gpatch2	94	56.202	Cricetulus_griseus_chok1gshd
ENSAMXG00000001662	si:ch73-21k16.4	97	57.310	ENSCGRG00000015039	Gpatch2	96	56.140	Cricetulus_griseus_crigri
ENSAMXG00000001662	si:ch73-21k16.4	100	69.907	ENSCSEG00000002545	si:ch73-21k16.4	100	69.907	Cynoglossus_semilaevis
ENSAMXG00000001662	si:ch73-21k16.4	100	69.057	ENSCVAG00000006306	si:ch73-21k16.4	100	69.245	Cyprinodon_variegatus
ENSAMXG00000001662	si:ch73-21k16.4	100	80.080	ENSDARG00000101260	GPATCH2	100	80.080	Danio_rerio
ENSAMXG00000001662	si:ch73-21k16.4	51	60.967	ENSDNOG00000000826	GPATCH2	94	61.481	Dasypus_novemcinctus
ENSAMXG00000001662	si:ch73-21k16.4	96	57.594	ENSDORG00000030155	Gpatch2	96	56.607	Dipodomys_ordii
ENSAMXG00000001662	si:ch73-21k16.4	99	52.741	ENSETEG00000012316	GPATCH2	97	52.363	Echinops_telfairi
ENSAMXG00000001662	si:ch73-21k16.4	96	38.198	ENSEBUG00000014275	si:ch73-21k16.4	70	45.103	Eptatretus_burgeri
ENSAMXG00000001662	si:ch73-21k16.4	99	56.038	ENSEASG00005003507	GPATCH2	97	54.906	Equus_asinus_asinus
ENSAMXG00000001662	si:ch73-21k16.4	99	56.038	ENSECAG00000013263	GPATCH2	97	54.906	Equus_caballus
ENSAMXG00000001662	si:ch73-21k16.4	96	56.275	ENSEEUG00000008748	GPATCH2	96	55.709	Erinaceus_europaeus
ENSAMXG00000001662	si:ch73-21k16.4	100	73.040	ENSELUG00000004934	si:ch73-21k16.4	100	73.231	Esox_lucius
ENSAMXG00000001662	si:ch73-21k16.4	99	56.870	ENSFCAG00000007129	GPATCH2	96	55.725	Felis_catus
ENSAMXG00000001662	si:ch73-21k16.4	99	56.736	ENSFALG00000012223	GPATCH2	99	56.357	Ficedula_albicollis
ENSAMXG00000001662	si:ch73-21k16.4	95	55.976	ENSFDAG00000011026	GPATCH2	96	54.980	Fukomys_damarensis
ENSAMXG00000001662	si:ch73-21k16.4	80	76.510	ENSFHEG00000008699	si:ch73-21k16.4	89	78.082	Fundulus_heteroclitus
ENSAMXG00000001662	si:ch73-21k16.4	83	77.344	ENSGMOG00000001595	si:ch73-21k16.4	82	77.344	Gadus_morhua
ENSAMXG00000001662	si:ch73-21k16.4	99	57.061	ENSGALG00000009627	GPATCH2	99	56.679	Gallus_gallus
ENSAMXG00000001662	si:ch73-21k16.4	100	68.679	ENSGAFG00000005041	si:ch73-21k16.4	100	68.679	Gambusia_affinis
ENSAMXG00000001662	si:ch73-21k16.4	99	70.722	ENSGACG00000013427	si:ch73-21k16.4	100	70.722	Gasterosteus_aculeatus
ENSAMXG00000001662	si:ch73-21k16.4	99	56.190	ENSGAGG00000013122	GPATCH2	99	55.810	Gopherus_agassizii
ENSAMXG00000001662	si:ch73-21k16.4	99	56.121	ENSGGOG00000009440	GPATCH2	97	54.991	Gorilla_gorilla
ENSAMXG00000001662	si:ch73-21k16.4	100	69.794	ENSHBUG00000014399	si:ch73-21k16.4	100	69.981	Haplochromis_burtoni
ENSAMXG00000001662	si:ch73-21k16.4	99	56.038	ENSHGLG00000019513	GPATCH2	97	54.906	Heterocephalus_glaber_female
ENSAMXG00000001662	si:ch73-21k16.4	99	56.038	ENSHGLG00100003689	GPATCH2	97	54.906	Heterocephalus_glaber_male
ENSAMXG00000001662	si:ch73-21k16.4	100	62.764	ENSHCOG00000011331	si:ch73-21k16.4	100	62.956	Hippocampus_comes
ENSAMXG00000001662	si:ch73-21k16.4	100	65.079	ENSIPUG00000012840	si:ch73-21k16.4	100	65.079	Ictalurus_punctatus
ENSAMXG00000001662	si:ch73-21k16.4	99	55.660	ENSSTOG00000024959	GPATCH2	97	54.528	Ictidomys_tridecemlineatus
ENSAMXG00000001662	si:ch73-21k16.4	98	54.352	ENSJJAG00000019244	Gpatch2	94	53.191	Jaculus_jaculus
ENSAMXG00000001662	si:ch73-21k16.4	100	68.831	ENSLBEG00000008187	si:ch73-21k16.4	100	69.737	Labrus_bergylta
ENSAMXG00000001662	si:ch73-21k16.4	100	60.308	ENSLACG00000013951	GPATCH2	100	60.077	Latimeria_chalumnae
ENSAMXG00000001662	si:ch73-21k16.4	100	64.231	ENSLOCG00000016058	si:ch73-21k16.4	100	64.423	Lepisosteus_oculatus
ENSAMXG00000001662	si:ch73-21k16.4	96	56.607	ENSLAFG00000003787	GPATCH2	97	55.424	Loxodonta_africana
ENSAMXG00000001662	si:ch73-21k16.4	99	56.121	ENSMFAG00000000617	GPATCH2	97	54.991	Macaca_fascicularis
ENSAMXG00000001662	si:ch73-21k16.4	99	56.121	ENSMMUG00000014946	GPATCH2	97	54.991	Macaca_mulatta
ENSAMXG00000001662	si:ch73-21k16.4	99	56.121	ENSMNEG00000034969	GPATCH2	97	54.991	Macaca_nemestrina
ENSAMXG00000001662	si:ch73-21k16.4	99	56.121	ENSMLEG00000032285	GPATCH2	97	54.991	Mandrillus_leucophaeus
ENSAMXG00000001662	si:ch73-21k16.4	100	69.981	ENSMAMG00000015684	si:ch73-21k16.4	100	70.169	Mastacembelus_armatus
ENSAMXG00000001662	si:ch73-21k16.4	100	69.794	ENSMZEG00005015040	si:ch73-21k16.4	100	69.981	Maylandia_zebra
ENSAMXG00000001662	si:ch73-21k16.4	56	62.245	ENSMGAG00000009428	GPATCH2	94	62.745	Meleagris_gallopavo
ENSAMXG00000001662	si:ch73-21k16.4	99	56.522	ENSMAUG00000004851	Gpatch2	97	55.388	Mesocricetus_auratus
ENSAMXG00000001662	si:ch73-21k16.4	99	55.492	ENSMICG00000037090	GPATCH2	97	54.802	Microcebus_murinus
ENSAMXG00000001662	si:ch73-21k16.4	97	57.115	ENSMOCG00000020821	Gpatch2	97	55.263	Microtus_ochrogaster
ENSAMXG00000001662	si:ch73-21k16.4	100	65.966	ENSMMOG00000015329	si:ch73-21k16.4	100	66.157	Mola_mola
ENSAMXG00000001662	si:ch73-21k16.4	99	53.817	ENSMODG00000004195	GPATCH2	93	53.435	Monodelphis_domestica
ENSAMXG00000001662	si:ch73-21k16.4	100	64.896	ENSMALG00000016801	si:ch73-21k16.4	100	66.034	Monopterus_albus
ENSAMXG00000001662	si:ch73-21k16.4	97	57.752	MGP_CAROLIEiJ_G0015030	Gpatch2	96	56.238	Mus_caroli
ENSAMXG00000001662	si:ch73-21k16.4	97	56.977	ENSMUSG00000039210	Gpatch2	96	56.238	Mus_musculus
ENSAMXG00000001662	si:ch73-21k16.4	97	56.589	MGP_PahariEiJ_G0028262	Gpatch2	96	55.050	Mus_pahari
ENSAMXG00000001662	si:ch73-21k16.4	97	57.558	MGP_SPRETEiJ_G0015830	Gpatch2	96	56.040	Mus_spretus
ENSAMXG00000001662	si:ch73-21k16.4	99	55.598	ENSMPUG00000004269	GPATCH2	97	54.649	Mustela_putorius_furo
ENSAMXG00000001662	si:ch73-21k16.4	97	55.969	ENSNGAG00000002207	Gpatch2	94	54.990	Nannospalax_galili
ENSAMXG00000001662	si:ch73-21k16.4	100	64.607	ENSNBRG00000020932	si:ch73-21k16.4	100	64.794	Neolamprologus_brichardi
ENSAMXG00000001662	si:ch73-21k16.4	99	56.121	ENSNLEG00000014201	GPATCH2	97	54.991	Nomascus_leucogenys
ENSAMXG00000001662	si:ch73-21k16.4	96	50.395	ENSMEUG00000012239	GPATCH2	96	49.112	Notamacropus_eugenii
ENSAMXG00000001662	si:ch73-21k16.4	99	53.774	ENSOPRG00000010126	GPATCH2	97	52.453	Ochotona_princeps
ENSAMXG00000001662	si:ch73-21k16.4	99	56.604	ENSODEG00000014927	GPATCH2	97	55.660	Octodon_degus
ENSAMXG00000001662	si:ch73-21k16.4	100	70.169	ENSONIG00000000570	si:ch73-21k16.4	100	70.755	Oreochromis_niloticus
ENSAMXG00000001662	si:ch73-21k16.4	96	53.061	ENSOANG00000008549	GPATCH2	97	52.319	Ornithorhynchus_anatinus
ENSAMXG00000001662	si:ch73-21k16.4	99	55.660	ENSOCUG00000014512	GPATCH2	94	55.426	Oryctolagus_cuniculus
ENSAMXG00000001662	si:ch73-21k16.4	100	66.976	ENSORLG00000016810	si:ch73-21k16.4	100	67.669	Oryzias_latipes
ENSAMXG00000001662	si:ch73-21k16.4	100	66.790	ENSORLG00020003127	si:ch73-21k16.4	100	67.857	Oryzias_latipes_hni
ENSAMXG00000001662	si:ch73-21k16.4	100	66.790	ENSORLG00015022304	si:ch73-21k16.4	100	67.481	Oryzias_latipes_hsok
ENSAMXG00000001662	si:ch73-21k16.4	100	66.231	ENSOMEG00000017809	si:ch73-21k16.4	100	67.641	Oryzias_melastigma
ENSAMXG00000001662	si:ch73-21k16.4	99	56.685	ENSOGAG00000004485	GPATCH2	97	55.556	Otolemur_garnettii
ENSAMXG00000001662	si:ch73-21k16.4	99	55.871	ENSOARG00000011440	GPATCH2	97	54.735	Ovis_aries
ENSAMXG00000001662	si:ch73-21k16.4	99	56.121	ENSPPAG00000038887	GPATCH2	97	54.991	Pan_paniscus
ENSAMXG00000001662	si:ch73-21k16.4	99	56.274	ENSPPRG00000013363	GPATCH2	96	55.133	Panthera_pardus
ENSAMXG00000001662	si:ch73-21k16.4	99	56.121	ENSPTRG00000001986	GPATCH2	97	54.991	Pan_troglodytes
ENSAMXG00000001662	si:ch73-21k16.4	99	56.121	ENSPANG00000020943	GPATCH2	97	54.991	Papio_anubis
ENSAMXG00000001662	si:ch73-21k16.4	100	71.289	ENSPKIG00000004245	si:ch73-21k16.4	100	71.289	Paramormyrops_kingsleyae
ENSAMXG00000001662	si:ch73-21k16.4	99	56.844	ENSPSIG00000005373	GPATCH2	99	56.464	Pelodiscus_sinensis
ENSAMXG00000001662	si:ch73-21k16.4	100	65.226	ENSPMGG00000000611	si:ch73-21k16.4	100	65.226	Periophthalmus_magnuspinnatus
ENSAMXG00000001662	si:ch73-21k16.4	97	55.922	ENSPEMG00000018364	Gpatch2	96	54.757	Peromyscus_maniculatus_bairdii
ENSAMXG00000001662	si:ch73-21k16.4	99	56.298	ENSPCIG00000027888	GPATCH2	97	55.153	Phascolarctos_cinereus
ENSAMXG00000001662	si:ch73-21k16.4	100	69.043	ENSPFOG00000008062	si:ch73-21k16.4	100	69.231	Poecilia_formosa
ENSAMXG00000001662	si:ch73-21k16.4	100	69.043	ENSPLAG00000022219	si:ch73-21k16.4	100	69.231	Poecilia_latipinna
ENSAMXG00000001662	si:ch73-21k16.4	100	69.231	ENSPMEG00000010687	si:ch73-21k16.4	100	70.000	Poecilia_mexicana
ENSAMXG00000001662	si:ch73-21k16.4	99	66.041	ENSPREG00000011915	si:ch73-21k16.4	98	66.417	Poecilia_reticulata
ENSAMXG00000001662	si:ch73-21k16.4	99	51.789	ENSPPYG00000000216	GPATCH2	96	50.659	Pongo_abelii
ENSAMXG00000001662	si:ch73-21k16.4	96	48.024	ENSPCAG00000013998	GPATCH2	99	47.638	Procavia_capensis
ENSAMXG00000001662	si:ch73-21k16.4	99	56.226	ENSPVAG00000010649	GPATCH2	96	55.094	Pteropus_vampyrus
ENSAMXG00000001662	si:ch73-21k16.4	100	69.794	ENSPNYG00000014144	si:ch73-21k16.4	100	69.981	Pundamilia_nyererei
ENSAMXG00000001662	si:ch73-21k16.4	99	56.309	ENSRROG00000012833	GPATCH2	97	55.179	Rhinopithecus_roxellana
ENSAMXG00000001662	si:ch73-21k16.4	99	55.660	ENSSBOG00000028891	GPATCH2	97	54.614	Saimiri_boliviensis_boliviensis
ENSAMXG00000001662	si:ch73-21k16.4	95	53.183	ENSSHAG00000015123	GPATCH2	95	51.951	Sarcophilus_harrisii
ENSAMXG00000001662	si:ch73-21k16.4	100	70.508	ENSSFOG00015000674	gpatch2	100	69.922	Scleropages_formosus
ENSAMXG00000001662	si:ch73-21k16.4	100	70.280	ENSSMAG00000009585	si:ch73-21k16.4	100	71.215	Scophthalmus_maximus
ENSAMXG00000001662	si:ch73-21k16.4	100	69.963	ENSSDUG00000011998	si:ch73-21k16.4	100	70.356	Seriola_dumerili
ENSAMXG00000001662	si:ch73-21k16.4	100	70.149	ENSSLDG00000025385	si:ch73-21k16.4	100	70.544	Seriola_lalandi_dorsalis
ENSAMXG00000001662	si:ch73-21k16.4	96	56.016	ENSSARG00000013063	GPATCH2	96	54.832	Sorex_araneus
ENSAMXG00000001662	si:ch73-21k16.4	100	70.556	ENSSPAG00000023569	si:ch73-21k16.4	100	71.215	Stegastes_partitus
ENSAMXG00000001662	si:ch73-21k16.4	99	55.682	ENSSSCG00000027207	GPATCH2	97	54.545	Sus_scrofa
ENSAMXG00000001662	si:ch73-21k16.4	100	69.288	ENSTRUG00000015569	si:ch73-21k16.4	100	70.037	Takifugu_rubripes
ENSAMXG00000001662	si:ch73-21k16.4	99	68.061	ENSTNIG00000016304	si:ch73-21k16.4	99	68.233	Tetraodon_nigroviridis
ENSAMXG00000001662	si:ch73-21k16.4	78	92.000	ENSTTRG00000003739	GPATCH2	76	92.000	Tursiops_truncatus
ENSAMXG00000001662	si:ch73-21k16.4	99	55.977	ENSUMAG00000020588	GPATCH2	97	55.028	Ursus_maritimus
ENSAMXG00000001662	si:ch73-21k16.4	99	54.545	ENSVPAG00000005192	GPATCH2	97	53.598	Vicugna_pacos
ENSAMXG00000001662	si:ch73-21k16.4	99	55.977	ENSVVUG00000012998	GPATCH2	97	55.218	Vulpes_vulpes
ENSAMXG00000001662	si:ch73-21k16.4	97	57.874	ENSXETG00000021194	gpatch2	94	56.863	Xenopus_tropicalis
ENSAMXG00000001662	si:ch73-21k16.4	100	68.061	ENSXCOG00000007145	si:ch73-21k16.4	100	68.061	Xiphophorus_couchianus
ENSAMXG00000001662	si:ch73-21k16.4	100	69.754	ENSXMAG00000004679	si:ch73-21k16.4	100	69.754	Xiphophorus_maculatus