EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000001713 (Gene tree)
Gene ID: 103022184
Gene Symbol: tsfm
Alias: zgc:158429
Full Name: Ts translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 3823 bases
Position: chr13:36446335-36450157
Accession: 103022184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000001743	EF_TS	PF00889.19	1.4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000001743	-	1704	XM_007254252	ENSAMXP00000001743	302 (aa)	XP_007254314	W5K2D3

Gene Model

Click here to download ENSAMXG00000001713's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000001713's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000001713	tsfm	87	50.549	ENSG00000123297	TSFM	100	58.451	Homo_sapiens
ENSAMXG00000001713	tsfm	100	67.638	ENSAPOG00000014844	tsfm	100	67.638	Acanthochromis_polyacanthus
ENSAMXG00000001713	tsfm	90	49.129	ENSAMEG00000005452	TSFM	89	49.485	Ailuropoda_melanoleuca
ENSAMXG00000001713	tsfm	99	68.404	ENSACIG00000001066	tsfm	99	68.404	Amphilophus_citrinellus
ENSAMXG00000001713	tsfm	100	66.990	ENSAOCG00000007132	tsfm	100	66.990	Amphiprion_ocellaris
ENSAMXG00000001713	tsfm	100	67.314	ENSAPEG00000015755	tsfm	100	67.314	Amphiprion_percula
ENSAMXG00000001713	tsfm	100	65.696	ENSATEG00000001497	tsfm	100	65.696	Anabas_testudineus
ENSAMXG00000001713	tsfm	96	51.148	ENSACAG00000013044	TSFM	94	51.148	Anolis_carolinensis
ENSAMXG00000001713	tsfm	88	49.645	ENSANAG00000038019	TSFM	87	50.000	Aotus_nancymaae
ENSAMXG00000001713	tsfm	98	68.092	ENSACLG00000000139	tsfm	99	68.092	Astatotilapia_calliptera
ENSAMXG00000001713	tsfm	87	51.282	ENSBTAG00000016912	TSFM	72	50.896	Bos_taurus
ENSAMXG00000001713	tsfm	87	35.294	WBGene00010094	tsfm-1	91	35.294	Caenorhabditis_elegans
ENSAMXG00000001713	tsfm	90	48.780	ENSCJAG00000006600	TSFM	89	49.141	Callithrix_jacchus
ENSAMXG00000001713	tsfm	87	50.183	ENSCAFG00000000293	-	86	50.542	Canis_familiaris
ENSAMXG00000001713	tsfm	50	40.127	ENSCAFG00000007218	-	92	40.994	Canis_familiaris
ENSAMXG00000001713	tsfm	87	51.095	ENSCAFG00020022844	TSFM	67	51.439	Canis_lupus_dingo
ENSAMXG00000001713	tsfm	87	50.916	ENSCHIG00000013850	TSFM	87	50.538	Capra_hircus
ENSAMXG00000001713	tsfm	75	50.211	ENSTSYG00000028892	TSFM	92	50.206	Carlito_syrichta
ENSAMXG00000001713	tsfm	62	41.270	ENSCAPG00000007733	-	95	41.969	Cavia_aperea
ENSAMXG00000001713	tsfm	87	50.916	ENSCPOG00000037732	TSFM	84	51.264	Cavia_porcellus
ENSAMXG00000001713	tsfm	88	50.542	ENSCCAG00000033254	TSFM	86	50.890	Cebus_capucinus
ENSAMXG00000001713	tsfm	90	50.174	ENSCATG00000016867	TSFM	89	50.515	Cercocebus_atys
ENSAMXG00000001713	tsfm	87	48.708	ENSCLAG00000009226	TSFM	85	49.455	Chinchilla_lanigera
ENSAMXG00000001713	tsfm	90	50.523	ENSCSAG00000004601	TSFM	87	51.399	Chlorocebus_sabaeus
ENSAMXG00000001713	tsfm	54	66.981	ENSCHOG00000002360	TSFM	64	66.981	Choloepus_hoffmanni
ENSAMXG00000001713	tsfm	95	53.135	ENSCPBG00000018147	TSFM	91	53.135	Chrysemys_picta_bellii
ENSAMXG00000001713	tsfm	87	33.446	ENSCING00000001275	-	88	33.446	Ciona_intestinalis
ENSAMXG00000001713	tsfm	68	35.616	ENSCSAVG00000007722	-	99	35.616	Ciona_savignyi
ENSAMXG00000001713	tsfm	82	48.638	ENSCANG00000030298	TSFM	89	51.240	Colobus_angolensis_palliatus
ENSAMXG00000001713	tsfm	89	51.579	ENSCGRG00001023000	TSFM	87	51.748	Cricetulus_griseus_chok1gshd
ENSAMXG00000001713	tsfm	89	51.579	ENSCGRG00000006566	TSFM	87	51.748	Cricetulus_griseus_crigri
ENSAMXG00000001713	tsfm	100	56.579	ENSCSEG00000003376	tsfm	100	56.579	Cynoglossus_semilaevis
ENSAMXG00000001713	tsfm	98	68.317	ENSCVAG00000001340	tsfm	99	68.317	Cyprinodon_variegatus
ENSAMXG00000001713	tsfm	98	69.103	ENSDARG00000060748	tsfm	99	69.103	Danio_rerio
ENSAMXG00000001713	tsfm	87	50.549	ENSDNOG00000049415	TSFM	86	50.355	Dasypus_novemcinctus
ENSAMXG00000001713	tsfm	77	51.029	ENSDORG00000007272	Tsfm	91	51.029	Dipodomys_ordii
ENSAMXG00000001713	tsfm	91	42.403	FBgn0032646	mEFTs	89	42.403	Drosophila_melanogaster
ENSAMXG00000001713	tsfm	88	50.545	ENSETEG00000002686	-	85	50.903	Echinops_telfairi
ENSAMXG00000001713	tsfm	87	52.015	ENSEASG00005007292	TSFM	67	52.347	Equus_asinus_asinus
ENSAMXG00000001713	tsfm	87	52.381	ENSECAG00000010520	TSFM	75	52.708	Equus_caballus
ENSAMXG00000001713	tsfm	98	68.977	ENSELUG00000015481	tsfm	98	68.977	Esox_lucius
ENSAMXG00000001713	tsfm	88	49.645	ENSFCAG00000023794	TSFM	87	50.000	Felis_catus
ENSAMXG00000001713	tsfm	92	51.220	ENSFDAG00000016548	TSFM	88	51.220	Fukomys_damarensis
ENSAMXG00000001713	tsfm	98	69.307	ENSFHEG00000013458	tsfm	99	69.307	Fundulus_heteroclitus
ENSAMXG00000001713	tsfm	91	69.314	ENSGMOG00000000868	tsfm	96	69.314	Gadus_morhua
ENSAMXG00000001713	tsfm	98	67.327	ENSGAFG00000021764	tsfm	99	67.327	Gambusia_affinis
ENSAMXG00000001713	tsfm	95	66.667	ENSGACG00000000697	tsfm	95	66.667	Gasterosteus_aculeatus
ENSAMXG00000001713	tsfm	93	53.974	ENSGAGG00000020897	TSFM	89	53.974	Gopherus_agassizii
ENSAMXG00000001713	tsfm	90	49.129	ENSGGOG00000001415	TSFM	89	49.485	Gorilla_gorilla
ENSAMXG00000001713	tsfm	98	68.421	ENSHBUG00000021738	tsfm	99	68.421	Haplochromis_burtoni
ENSAMXG00000001713	tsfm	92	49.650	ENSHGLG00000008559	TSFM	87	49.650	Heterocephalus_glaber_female
ENSAMXG00000001713	tsfm	92	49.650	ENSHGLG00100005643	TSFM	87	49.650	Heterocephalus_glaber_male
ENSAMXG00000001713	tsfm	100	66.775	ENSHCOG00000021049	tsfm	100	66.775	Hippocampus_comes
ENSAMXG00000001713	tsfm	90	58.696	ENSIPUG00000019836	tsfm	81	58.696	Ictalurus_punctatus
ENSAMXG00000001713	tsfm	87	53.285	ENSSTOG00000001159	TSFM	85	52.878	Ictidomys_tridecemlineatus
ENSAMXG00000001713	tsfm	90	50.000	ENSJJAG00000012907	Tsfm	86	50.000	Jaculus_jaculus
ENSAMXG00000001713	tsfm	100	66.667	ENSKMAG00000018906	tsfm	100	66.667	Kryptolebias_marmoratus
ENSAMXG00000001713	tsfm	99	66.124	ENSLBEG00000019779	tsfm	99	66.124	Labrus_bergylta
ENSAMXG00000001713	tsfm	98	52.903	ENSLACG00000018125	TSFM	96	52.903	Latimeria_chalumnae
ENSAMXG00000001713	tsfm	98	47.771	ENSLOCG00000006608	tsfm	98	48.089	Lepisosteus_oculatus
ENSAMXG00000001713	tsfm	91	49.315	ENSLAFG00000015177	TSFM	89	49.315	Loxodonta_africana
ENSAMXG00000001713	tsfm	90	50.174	ENSMFAG00000036132	TSFM	89	50.515	Macaca_fascicularis
ENSAMXG00000001713	tsfm	90	50.174	ENSMMUG00000005893	TSFM	89	50.515	Macaca_mulatta
ENSAMXG00000001713	tsfm	90	50.174	ENSMNEG00000026351	TSFM	89	50.515	Macaca_nemestrina
ENSAMXG00000001713	tsfm	90	50.174	ENSMLEG00000029811	TSFM	89	50.515	Mandrillus_leucophaeus
ENSAMXG00000001713	tsfm	100	66.343	ENSMAMG00000002230	tsfm	100	66.343	Mastacembelus_armatus
ENSAMXG00000001713	tsfm	98	68.421	ENSMZEG00005008170	tsfm	99	68.421	Maylandia_zebra
ENSAMXG00000001713	tsfm	95	50.164	ENSMAUG00000011705	Tsfm	92	50.164	Mesocricetus_auratus
ENSAMXG00000001713	tsfm	86	51.685	ENSMICG00000003812	TSFM	85	51.636	Microcebus_murinus
ENSAMXG00000001713	tsfm	89	50.177	ENSMOCG00000006104	Tsfm	88	50.352	Microtus_ochrogaster
ENSAMXG00000001713	tsfm	99	68.404	ENSMMOG00000021854	tsfm	99	68.404	Mola_mola
ENSAMXG00000001713	tsfm	87	52.381	ENSMODG00000021351	TSFM	82	52.381	Monodelphis_domestica
ENSAMXG00000001713	tsfm	100	66.343	ENSMALG00000015046	tsfm	100	66.343	Monopterus_albus
ENSAMXG00000001713	tsfm	89	51.916	MGP_CAROLIEiJ_G0015873	Tsfm	88	51.916	Mus_caroli
ENSAMXG00000001713	tsfm	89	51.916	ENSMUSG00000040521	Tsfm	88	51.916	Mus_musculus
ENSAMXG00000001713	tsfm	97	50.645	MGP_PahariEiJ_G0031212	Tsfm	94	50.645	Mus_pahari
ENSAMXG00000001713	tsfm	89	51.916	MGP_SPRETEiJ_G0016699	Tsfm	88	51.916	Mus_spretus
ENSAMXG00000001713	tsfm	90	48.432	ENSMPUG00000002051	TSFM	88	49.301	Mustela_putorius_furo
ENSAMXG00000001713	tsfm	88	52.364	ENSMLUG00000005940	TSFM	86	52.688	Myotis_lucifugus
ENSAMXG00000001713	tsfm	87	51.460	ENSNGAG00000014356	Tsfm	84	51.079	Nannospalax_galili
ENSAMXG00000001713	tsfm	98	67.763	ENSNBRG00000016413	tsfm	99	67.763	Neolamprologus_brichardi
ENSAMXG00000001713	tsfm	90	49.826	ENSNLEG00000017178	TSFM	89	50.172	Nomascus_leucogenys
ENSAMXG00000001713	tsfm	74	55.556	ENSMEUG00000004047	TSFM	67	55.556	Notamacropus_eugenii
ENSAMXG00000001713	tsfm	89	46.405	ENSOPRG00000006670	TSFM	88	46.753	Ochotona_princeps
ENSAMXG00000001713	tsfm	88	53.261	ENSODEG00000001882	TSFM	88	52.265	Octodon_degus
ENSAMXG00000001713	tsfm	98	62.951	ENSONIG00000019100	tsfm	97	62.951	Oreochromis_niloticus
ENSAMXG00000001713	tsfm	88	48.013	ENSOCUG00000012512	TSFM	78	45.897	Oryctolagus_cuniculus
ENSAMXG00000001713	tsfm	96	64.548	ENSORLG00000030201	tsfm	96	64.548	Oryzias_latipes
ENSAMXG00000001713	tsfm	91	67.730	ENSORLG00020004740	tsfm	96	65.217	Oryzias_latipes_hni
ENSAMXG00000001713	tsfm	91	66.312	ENSORLG00015022703	tsfm	96	63.880	Oryzias_latipes_hsok
ENSAMXG00000001713	tsfm	98	65.472	ENSOMEG00000008934	tsfm	98	65.472	Oryzias_melastigma
ENSAMXG00000001713	tsfm	89	51.264	ENSOGAG00000012235	TSFM	85	51.264	Otolemur_garnettii
ENSAMXG00000001713	tsfm	87	51.282	ENSOARG00000005095	TSFM	82	50.896	Ovis_aries
ENSAMXG00000001713	tsfm	90	49.477	ENSPPAG00000043428	TSFM	89	49.828	Pan_paniscus
ENSAMXG00000001713	tsfm	88	49.645	ENSPPRG00000009667	TSFM	87	50.000	Panthera_pardus
ENSAMXG00000001713	tsfm	90	49.301	ENSPTIG00000015290	TSFM	87	50.000	Panthera_tigris_altaica
ENSAMXG00000001713	tsfm	90	49.477	ENSPTRG00000005152	TSFM	89	49.828	Pan_troglodytes
ENSAMXG00000001713	tsfm	90	50.523	ENSPANG00000007866	TSFM	89	50.859	Papio_anubis
ENSAMXG00000001713	tsfm	99	63.279	ENSPKIG00000008495	tsfm	95	63.279	Paramormyrops_kingsleyae
ENSAMXG00000001713	tsfm	66	48.815	ENSPSIG00000015776	TSFM	96	48.815	Pelodiscus_sinensis
ENSAMXG00000001713	tsfm	98	68.647	ENSPMGG00000007022	tsfm	98	68.647	Periophthalmus_magnuspinnatus
ENSAMXG00000001713	tsfm	95	49.671	ENSPEMG00000000414	Tsfm	93	49.673	Peromyscus_maniculatus_bairdii
ENSAMXG00000001713	tsfm	89	52.650	ENSPCIG00000023619	TSFM	88	52.650	Phascolarctos_cinereus
ENSAMXG00000001713	tsfm	98	66.337	ENSPFOG00000010782	tsfm	99	66.337	Poecilia_formosa
ENSAMXG00000001713	tsfm	98	66.007	ENSPLAG00000008105	tsfm	99	66.007	Poecilia_latipinna
ENSAMXG00000001713	tsfm	98	66.667	ENSPMEG00000002567	tsfm	99	66.667	Poecilia_mexicana
ENSAMXG00000001713	tsfm	98	65.677	ENSPREG00000016696	tsfm	99	65.677	Poecilia_reticulata
ENSAMXG00000001713	tsfm	90	49.477	ENSPPYG00000004708	TSFM	76	49.828	Pongo_abelii
ENSAMXG00000001713	tsfm	88	49.477	ENSPCAG00000003789	TSFM	85	49.481	Procavia_capensis
ENSAMXG00000001713	tsfm	87	52.747	ENSPCOG00000021606	TSFM	85	53.069	Propithecus_coquereli
ENSAMXG00000001713	tsfm	88	51.064	ENSPVAG00000012141	TSFM	97	49.371	Pteropus_vampyrus
ENSAMXG00000001713	tsfm	98	68.421	ENSPNYG00000001230	tsfm	99	68.421	Pundamilia_nyererei
ENSAMXG00000001713	tsfm	100	86.139	ENSPNAG00000003241	tsfm	100	86.139	Pygocentrus_nattereri
ENSAMXG00000001713	tsfm	95	46.844	ENSRNOG00000048843	Tsfm	92	46.844	Rattus_norvegicus
ENSAMXG00000001713	tsfm	90	50.174	ENSRBIG00000037278	TSFM	89	50.515	Rhinopithecus_bieti
ENSAMXG00000001713	tsfm	90	50.174	ENSRROG00000031769	TSFM	89	50.515	Rhinopithecus_roxellana
ENSAMXG00000001713	tsfm	90	42.456	ENSSBOG00000021465	TSFM	88	42.907	Saimiri_boliviensis_boliviensis
ENSAMXG00000001713	tsfm	89	54.152	ENSSHAG00000009664	TSFM	80	54.152	Sarcophilus_harrisii
ENSAMXG00000001713	tsfm	96	63.211	ENSSFOG00015014457	tsfm	96	63.211	Scleropages_formosus
ENSAMXG00000001713	tsfm	100	66.667	ENSSMAG00000002467	tsfm	100	66.667	Scophthalmus_maximus
ENSAMXG00000001713	tsfm	98	69.868	ENSSDUG00000006833	tsfm	98	69.868	Seriola_dumerili
ENSAMXG00000001713	tsfm	98	69.868	ENSSLDG00000000715	tsfm	97	69.868	Seriola_lalandi_dorsalis
ENSAMXG00000001713	tsfm	68	43.137	ENSSARG00000000785	-	50	43.871	Sorex_araneus
ENSAMXG00000001713	tsfm	87	54.579	ENSSPUG00000006435	TSFM	98	54.579	Sphenodon_punctatus
ENSAMXG00000001713	tsfm	100	66.019	ENSSPAG00000002548	tsfm	100	66.019	Stegastes_partitus
ENSAMXG00000001713	tsfm	89	50.538	ENSSSCG00000037767	TSFM	73	51.071	Sus_scrofa
ENSAMXG00000001713	tsfm	99	64.918	ENSTRUG00000003081	tsfm	99	64.918	Takifugu_rubripes
ENSAMXG00000001713	tsfm	98	66.445	ENSTNIG00000014578	tsfm	98	66.445	Tetraodon_nigroviridis
ENSAMXG00000001713	tsfm	76	64.348	ENSTBEG00000011603	TSFM	70	64.348	Tupaia_belangeri
ENSAMXG00000001713	tsfm	89	50.526	ENSTTRG00000008351	TSFM	87	50.526	Tursiops_truncatus
ENSAMXG00000001713	tsfm	90	48.432	ENSUAMG00000013142	TSFM	89	48.797	Ursus_americanus
ENSAMXG00000001713	tsfm	90	48.432	ENSUMAG00000020123	TSFM	89	48.797	Ursus_maritimus
ENSAMXG00000001713	tsfm	70	57.609	ENSVPAG00000000209	TSFM	67	57.609	Vicugna_pacos
ENSAMXG00000001713	tsfm	88	48.410	ENSVVUG00000016735	TSFM	88	48.780	Vulpes_vulpes
ENSAMXG00000001713	tsfm	91	53.103	ENSXETG00000009653	tsfm	98	53.103	Xenopus_tropicalis
ENSAMXG00000001713	tsfm	98	66.997	ENSXMAG00000018468	tsfm	99	66.997	Xiphophorus_maculatus