EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000001755 (Gene tree)
Gene ID: 103044162
Gene Symbol: rpp40
Alias: Rpp40|rpp40l|zgc:86704
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 9226 bases
Position: chr9:30883282-30892507
Accession: 103044162
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000001788	Ribonuc_P_40	PF08584.11	1.3e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000001788	-	1227	XM_022673164	ENSAMXP00000001788	354 (aa)	XP_022528885	W5K2H7

Gene Model

Click here to download ENSAMXG00000001755's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03008	Ribosome biogenesis in eukaryotes	KEGG
amex03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000001755's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000001755	rpp40	99	48.739	ENSG00000124787	RPP40	99	48.344	Homo_sapiens
ENSAMXG00000001755	rpp40	89	37.618	ENSAPOG00000008660	rpp40	92	37.618	Acanthochromis_polyacanthus
ENSAMXG00000001755	rpp40	99	48.179	ENSAMEG00000012938	RPP40	98	48.179	Ailuropoda_melanoleuca
ENSAMXG00000001755	rpp40	99	43.944	ENSACIG00000003617	rpp40	99	43.944	Amphilophus_citrinellus
ENSAMXG00000001755	rpp40	100	45.531	ENSAOCG00000011846	rpp40	100	45.531	Amphiprion_ocellaris
ENSAMXG00000001755	rpp40	100	45.531	ENSAPEG00000001322	rpp40	100	45.531	Amphiprion_percula
ENSAMXG00000001755	rpp40	100	44.444	ENSATEG00000006584	rpp40	100	45.278	Anabas_testudineus
ENSAMXG00000001755	rpp40	84	48.355	ENSAPLG00000005691	RPP40	100	48.355	Anas_platyrhynchos
ENSAMXG00000001755	rpp40	99	46.629	ENSACAG00000006550	RPP40	87	46.629	Anolis_carolinensis
ENSAMXG00000001755	rpp40	99	48.179	ENSANAG00000029246	RPP40	98	48.179	Aotus_nancymaae
ENSAMXG00000001755	rpp40	98	46.591	ENSACLG00000015883	rpp40	96	46.591	Astatotilapia_calliptera
ENSAMXG00000001755	rpp40	99	49.721	ENSBTAG00000003332	RPP40	98	49.721	Bos_taurus
ENSAMXG00000001755	rpp40	99	48.739	ENSCJAG00000021373	RPP40	98	48.739	Callithrix_jacchus
ENSAMXG00000001755	rpp40	99	47.619	ENSCAFG00000009435	RPP40	98	47.619	Canis_familiaris
ENSAMXG00000001755	rpp40	99	47.619	ENSCAFG00020013380	RPP40	98	47.619	Canis_lupus_dingo
ENSAMXG00000001755	rpp40	99	49.438	ENSCHIG00000016849	RPP40	99	49.667	Capra_hircus
ENSAMXG00000001755	rpp40	99	48.739	ENSTSYG00000032857	RPP40	98	48.993	Carlito_syrichta
ENSAMXG00000001755	rpp40	89	42.857	ENSCAPG00000004957	RPP40	96	42.857	Cavia_aperea
ENSAMXG00000001755	rpp40	99	48.179	ENSCPOG00000005855	RPP40	98	48.179	Cavia_porcellus
ENSAMXG00000001755	rpp40	99	48.739	ENSCCAG00000019809	RPP40	98	48.739	Cebus_capucinus
ENSAMXG00000001755	rpp40	99	48.179	ENSCATG00000038787	RPP40	98	48.179	Cercocebus_atys
ENSAMXG00000001755	rpp40	99	47.339	ENSCLAG00000003235	RPP40	98	47.339	Chinchilla_lanigera
ENSAMXG00000001755	rpp40	99	48.179	ENSCSAG00000007307	RPP40	98	48.179	Chlorocebus_sabaeus
ENSAMXG00000001755	rpp40	52	61.194	ENSCHOG00000005856	-	75	61.194	Choloepus_hoffmanni
ENSAMXG00000001755	rpp40	99	48.883	ENSCPBG00000009003	RPP40	98	48.883	Chrysemys_picta_bellii
ENSAMXG00000001755	rpp40	99	48.179	ENSCANG00000033965	RPP40	98	48.179	Colobus_angolensis_palliatus
ENSAMXG00000001755	rpp40	98	47.159	ENSCGRG00001018328	Rpp40	98	47.159	Cricetulus_griseus_chok1gshd
ENSAMXG00000001755	rpp40	98	47.159	ENSCGRG00000011344	Rpp40	98	47.159	Cricetulus_griseus_crigri
ENSAMXG00000001755	rpp40	100	40.111	ENSCSEG00000015006	-	100	40.947	Cynoglossus_semilaevis
ENSAMXG00000001755	rpp40	74	42.336	ENSCVAG00000012169	rpp40	100	42.701	Cyprinodon_variegatus
ENSAMXG00000001755	rpp40	100	63.712	ENSDARG00000017605	rpp40	100	63.712	Danio_rerio
ENSAMXG00000001755	rpp40	80	43.299	ENSDNOG00000048136	RPP40	98	43.299	Dasypus_novemcinctus
ENSAMXG00000001755	rpp40	99	40.771	ENSDORG00000011196	-	99	40.771	Dipodomys_ordii
ENSAMXG00000001755	rpp40	99	48.179	ENSDORG00000029944	-	98	48.179	Dipodomys_ordii
ENSAMXG00000001755	rpp40	99	35.294	ENSETEG00000007458	RPP40	98	35.294	Echinops_telfairi
ENSAMXG00000001755	rpp40	98	42.737	ENSEBUG00000000386	rpp40	99	42.737	Eptatretus_burgeri
ENSAMXG00000001755	rpp40	99	47.765	ENSEASG00005012116	RPP40	79	47.765	Equus_asinus_asinus
ENSAMXG00000001755	rpp40	99	46.779	ENSECAG00000017247	RPP40	79	46.779	Equus_caballus
ENSAMXG00000001755	rpp40	56	44.118	ENSEEUG00000012087	RPP40	69	44.118	Erinaceus_europaeus
ENSAMXG00000001755	rpp40	100	58.449	ENSELUG00000017004	rpp40	100	58.449	Esox_lucius
ENSAMXG00000001755	rpp40	99	48.179	ENSFCAG00000009249	RPP40	98	48.179	Felis_catus
ENSAMXG00000001755	rpp40	86	48.160	ENSFALG00000013166	RPP40	99	48.160	Ficedula_albicollis
ENSAMXG00000001755	rpp40	80	39.726	ENSFDAG00000000265	-	99	39.726	Fukomys_damarensis
ENSAMXG00000001755	rpp40	99	47.339	ENSFDAG00000013001	-	98	47.339	Fukomys_damarensis
ENSAMXG00000001755	rpp40	100	47.486	ENSFHEG00000021429	rpp40	89	47.486	Fundulus_heteroclitus
ENSAMXG00000001755	rpp40	89	43.987	ENSGMOG00000018653	rpp40	100	43.987	Gadus_morhua
ENSAMXG00000001755	rpp40	99	49.157	ENSGALG00000036074	RPP40	98	49.157	Gallus_gallus
ENSAMXG00000001755	rpp40	84	38.721	ENSGAFG00000004189	-	100	38.721	Gambusia_affinis
ENSAMXG00000001755	rpp40	100	48.459	ENSGACG00000002472	rpp40	100	48.459	Gasterosteus_aculeatus
ENSAMXG00000001755	rpp40	99	48.459	ENSGAGG00000012918	RPP40	98	48.459	Gopherus_agassizii
ENSAMXG00000001755	rpp40	99	49.020	ENSGGOG00000013764	RPP40	98	49.020	Gorilla_gorilla
ENSAMXG00000001755	rpp40	89	44.828	ENSHBUG00000009378	rpp40	92	44.828	Haplochromis_burtoni
ENSAMXG00000001755	rpp40	99	47.619	ENSHGLG00000004871	RPP40	98	47.619	Heterocephalus_glaber_female
ENSAMXG00000001755	rpp40	99	47.619	ENSHGLG00100002080	RPP40	98	47.619	Heterocephalus_glaber_male
ENSAMXG00000001755	rpp40	97	37.249	ENSHCOG00000013264	-	94	37.249	Hippocampus_comes
ENSAMXG00000001755	rpp40	100	67.598	ENSIPUG00000008951	RPP40	100	67.598	Ictalurus_punctatus
ENSAMXG00000001755	rpp40	99	47.339	ENSSTOG00000011199	RPP40	98	47.339	Ictidomys_tridecemlineatus
ENSAMXG00000001755	rpp40	99	46.067	ENSJJAG00000020629	Rpp40	98	46.067	Jaculus_jaculus
ENSAMXG00000001755	rpp40	100	42.179	ENSKMAG00000019358	rpp40	100	42.179	Kryptolebias_marmoratus
ENSAMXG00000001755	rpp40	100	49.162	ENSLBEG00000022724	rpp40	100	49.162	Labrus_bergylta
ENSAMXG00000001755	rpp40	99	51.397	ENSLACG00000014848	RPP40	99	51.397	Latimeria_chalumnae
ENSAMXG00000001755	rpp40	100	53.740	ENSLOCG00000011650	rpp40	99	53.740	Lepisosteus_oculatus
ENSAMXG00000001755	rpp40	82	47.315	ENSLAFG00000007530	RPP40	98	47.315	Loxodonta_africana
ENSAMXG00000001755	rpp40	99	47.899	ENSMFAG00000043100	RPP40	98	47.899	Macaca_fascicularis
ENSAMXG00000001755	rpp40	99	48.179	ENSMMUG00000004966	RPP40	98	48.179	Macaca_mulatta
ENSAMXG00000001755	rpp40	99	48.179	ENSMNEG00000041986	RPP40	98	48.322	Macaca_nemestrina
ENSAMXG00000001755	rpp40	99	41.457	ENSMLEG00000040851	RPP40	99	49.419	Mandrillus_leucophaeus
ENSAMXG00000001755	rpp40	100	48.045	ENSMAMG00000019551	rpp40	99	48.045	Mastacembelus_armatus
ENSAMXG00000001755	rpp40	99	47.059	ENSMZEG00005019475	rpp40	99	47.059	Maylandia_zebra
ENSAMXG00000001755	rpp40	98	46.761	ENSMGAG00000004009	RPP40	98	46.761	Meleagris_gallopavo
ENSAMXG00000001755	rpp40	99	47.619	ENSMAUG00000010268	Rpp40	98	47.619	Mesocricetus_auratus
ENSAMXG00000001755	rpp40	99	47.899	ENSMICG00000003297	RPP40	98	43.820	Microcebus_murinus
ENSAMXG00000001755	rpp40	99	47.059	ENSMOCG00000000305	Rpp40	98	47.059	Microtus_ochrogaster
ENSAMXG00000001755	rpp40	100	40.730	ENSMMOG00000020591	-	100	40.730	Mola_mola
ENSAMXG00000001755	rpp40	99	47.486	ENSMODG00000009826	RPP40	98	47.486	Monodelphis_domestica
ENSAMXG00000001755	rpp40	100	47.765	ENSMALG00000020133	rpp40	100	47.765	Monopterus_albus
ENSAMXG00000001755	rpp40	99	47.899	MGP_CAROLIEiJ_G0018429	Rpp40	77	71.875	Mus_caroli
ENSAMXG00000001755	rpp40	99	48.179	ENSMUSG00000021418	Rpp40	76	71.875	Mus_musculus
ENSAMXG00000001755	rpp40	99	47.619	MGP_PahariEiJ_G0019497	Rpp40	77	71.875	Mus_pahari
ENSAMXG00000001755	rpp40	99	47.899	MGP_SPRETEiJ_G0019309	Rpp40	77	71.875	Mus_spretus
ENSAMXG00000001755	rpp40	99	48.179	ENSMPUG00000000530	RPP40	92	48.179	Mustela_putorius_furo
ENSAMXG00000001755	rpp40	99	48.739	ENSMLUG00000000501	RPP40	98	48.739	Myotis_lucifugus
ENSAMXG00000001755	rpp40	99	47.339	ENSNGAG00000023955	-	98	47.339	Nannospalax_galili
ENSAMXG00000001755	rpp40	94	44.807	ENSNGAG00000022529	-	98	44.807	Nannospalax_galili
ENSAMXG00000001755	rpp40	88	43.260	ENSNBRG00000017465	rpp40	86	43.034	Neolamprologus_brichardi
ENSAMXG00000001755	rpp40	99	48.459	ENSNLEG00000034397	RPP40	98	48.459	Nomascus_leucogenys
ENSAMXG00000001755	rpp40	99	42.857	ENSMEUG00000005300	RPP40	98	42.857	Notamacropus_eugenii
ENSAMXG00000001755	rpp40	100	48.753	ENSODEG00000007255	-	99	48.753	Octodon_degus
ENSAMXG00000001755	rpp40	89	44.860	ENSODEG00000006170	-	100	44.860	Octodon_degus
ENSAMXG00000001755	rpp40	99	45.938	ENSODEG00000018153	-	98	45.938	Octodon_degus
ENSAMXG00000001755	rpp40	99	46.779	ENSONIG00000014016	rpp40	99	46.779	Oreochromis_niloticus
ENSAMXG00000001755	rpp40	82	50.502	ENSOANG00000001200	RPP40	98	50.502	Ornithorhynchus_anatinus
ENSAMXG00000001755	rpp40	98	44.507	ENSOCUG00000000354	RPP40	98	44.507	Oryctolagus_cuniculus
ENSAMXG00000001755	rpp40	99	44.507	ENSORLG00000008242	-	99	44.507	Oryzias_latipes
ENSAMXG00000001755	rpp40	99	43.944	ENSORLG00020013745	-	90	43.944	Oryzias_latipes_hni
ENSAMXG00000001755	rpp40	99	44.789	ENSORLG00015000887	-	99	44.789	Oryzias_latipes_hsok
ENSAMXG00000001755	rpp40	99	45.634	ENSOMEG00000002747	rpp40	99	45.634	Oryzias_melastigma
ENSAMXG00000001755	rpp40	99	47.059	ENSOGAG00000006055	RPP40	98	47.059	Otolemur_garnettii
ENSAMXG00000001755	rpp40	89	48.457	ENSOARG00000018783	RPP40	99	49.667	Ovis_aries
ENSAMXG00000001755	rpp40	99	48.739	ENSPPAG00000023703	RPP40	98	48.739	Pan_paniscus
ENSAMXG00000001755	rpp40	99	47.899	ENSPPRG00000005612	RPP40	98	47.899	Panthera_pardus
ENSAMXG00000001755	rpp40	99	45.938	ENSPTIG00000018847	RPP40	98	45.938	Panthera_tigris_altaica
ENSAMXG00000001755	rpp40	99	48.459	ENSPTRG00000017690	RPP40	98	48.459	Pan_troglodytes
ENSAMXG00000001755	rpp40	99	47.619	ENSPANG00000017865	RPP40	98	47.619	Papio_anubis
ENSAMXG00000001755	rpp40	100	56.510	ENSPKIG00000006311	rpp40	100	57.064	Paramormyrops_kingsleyae
ENSAMXG00000001755	rpp40	61	46.396	ENSPSIG00000007854	RPP40	100	46.396	Pelodiscus_sinensis
ENSAMXG00000001755	rpp40	93	41.964	ENSPEMG00000020809	Rpp40	95	42.547	Peromyscus_maniculatus_bairdii
ENSAMXG00000001755	rpp40	75	45.290	ENSPMAG00000008412	rpp40	99	45.290	Petromyzon_marinus
ENSAMXG00000001755	rpp40	99	48.179	ENSPCIG00000010682	RPP40	98	48.179	Phascolarctos_cinereus
ENSAMXG00000001755	rpp40	100	42.500	ENSPFOG00000011460	rpp40	99	42.500	Poecilia_formosa
ENSAMXG00000001755	rpp40	100	41.899	ENSPLAG00000001334	rpp40	100	41.899	Poecilia_latipinna
ENSAMXG00000001755	rpp40	100	43.296	ENSPMEG00000007721	rpp40	100	43.296	Poecilia_mexicana
ENSAMXG00000001755	rpp40	100	43.855	ENSPREG00000009215	rpp40	100	43.855	Poecilia_reticulata
ENSAMXG00000001755	rpp40	99	48.739	ENSPPYG00000016194	RPP40	98	48.739	Pongo_abelii
ENSAMXG00000001755	rpp40	99	46.499	ENSPCOG00000003907	RPP40	98	46.499	Propithecus_coquereli
ENSAMXG00000001755	rpp40	99	47.619	ENSPVAG00000011325	RPP40	98	47.619	Pteropus_vampyrus
ENSAMXG00000001755	rpp40	84	43.144	ENSPNYG00000004432	rpp40	100	43.144	Pundamilia_nyererei
ENSAMXG00000001755	rpp40	100	67.867	ENSPNAG00000019125	rpp40	100	67.867	Pygocentrus_nattereri
ENSAMXG00000001755	rpp40	99	47.619	ENSRNOG00000016226	Rpp40	98	47.987	Rattus_norvegicus
ENSAMXG00000001755	rpp40	99	47.899	ENSRBIG00000035800	RPP40	98	47.987	Rhinopithecus_bieti
ENSAMXG00000001755	rpp40	99	47.899	ENSRROG00000039116	RPP40	98	47.899	Rhinopithecus_roxellana
ENSAMXG00000001755	rpp40	99	47.899	ENSSBOG00000020297	RPP40	98	47.899	Saimiri_boliviensis_boliviensis
ENSAMXG00000001755	rpp40	76	49.270	ENSSHAG00000002102	RPP40	99	49.270	Sarcophilus_harrisii
ENSAMXG00000001755	rpp40	100	56.787	ENSSFOG00015001142	rpp40	81	56.787	Scleropages_formosus
ENSAMXG00000001755	rpp40	100	48.603	ENSSDUG00000007202	rpp40	100	48.603	Seriola_dumerili
ENSAMXG00000001755	rpp40	100	48.324	ENSSLDG00000017563	rpp40	100	48.324	Seriola_lalandi_dorsalis
ENSAMXG00000001755	rpp40	99	48.179	ENSSPUG00000017487	-	98	48.179	Sphenodon_punctatus
ENSAMXG00000001755	rpp40	77	49.458	ENSSPUG00000018950	-	94	49.458	Sphenodon_punctatus
ENSAMXG00000001755	rpp40	100	44.693	ENSSPAG00000022716	rpp40	100	44.693	Stegastes_partitus
ENSAMXG00000001755	rpp40	99	47.619	ENSSSCG00000000998	RPP40	99	47.508	Sus_scrofa
ENSAMXG00000001755	rpp40	99	50.139	ENSTGUG00000002258	-	100	50.139	Taeniopygia_guttata
ENSAMXG00000001755	rpp40	98	49.003	ENSTRUG00000003755	rpp40	98	49.003	Takifugu_rubripes
ENSAMXG00000001755	rpp40	100	45.810	ENSTNIG00000003077	rpp40	100	45.810	Tetraodon_nigroviridis
ENSAMXG00000001755	rpp40	69	35.200	ENSTBEG00000014467	-	73	35.200	Tupaia_belangeri
ENSAMXG00000001755	rpp40	99	44.693	ENSTTRG00000007319	RPP40	99	44.693	Tursiops_truncatus
ENSAMXG00000001755	rpp40	99	47.899	ENSUAMG00000002159	RPP40	98	48.322	Ursus_americanus
ENSAMXG00000001755	rpp40	99	47.899	ENSUMAG00000018639	RPP40	92	47.899	Ursus_maritimus
ENSAMXG00000001755	rpp40	74	35.424	ENSVPAG00000004652	-	94	35.424	Vicugna_pacos
ENSAMXG00000001755	rpp40	99	47.619	ENSVVUG00000005451	RPP40	98	47.619	Vulpes_vulpes
ENSAMXG00000001755	rpp40	99	46.389	ENSXETG00000017617	rpp40	99	46.389	Xenopus_tropicalis
ENSAMXG00000001755	rpp40	53	49.524	ENSXCOG00000019991	-	80	33.962	Xiphophorus_couchianus
ENSAMXG00000001755	rpp40	100	33.151	ENSXMAG00000024940	rpp40	99	33.151	Xiphophorus_maculatus