EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000001760 (Gene tree)
Gene ID: 103042035
Gene Symbol: zgc:110045
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 11630 bases
Position: chr25:22380473-22392102
Accession: 103042035
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000001809	KH_1	PF00013.29	1.7e-41	1	2
ENSAMXP00000001809	KH_1	PF00013.29	1.7e-41	2	2
ENSAMXP00000001809	KH_2	PF07650.17	7.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000001809	-	1335	XM_022684842	ENSAMXP00000001809	444 (aa)	XP_022540563	W5K2J8

Gene Model

Click here to download ENSAMXG00000001760's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000001760's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000001760	zgc:110045	72	69.375	ENSAMXG00000013588	-	97	69.375
ENSAMXG00000001760	zgc:110045	73	65.043	ENSAMXG00000003440	pcbp3	94	65.043
ENSAMXG00000001760	zgc:110045	73	61.377	ENSAMXG00000037819	pcbp2	97	61.377
ENSAMXG00000001760	zgc:110045	99	54.123	ENSAMXG00000033125	pcbp4	97	54.123
ENSAMXG00000001760	zgc:110045	51	48.438	ENSAMXG00000011326	hnrnpk	52	48.438
ENSAMXG00000001760	zgc:110045	73	59.337	ENSAMXG00000016858	-	97	59.281

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000001760	zgc:110045	75	67.868	ENSAPOG00000020003	pcbp3	88	67.868	Acanthochromis_polyacanthus
ENSAMXG00000001760	zgc:110045	72	68.788	ENSAPOG00000016582	-	95	68.788	Acanthochromis_polyacanthus
ENSAMXG00000001760	zgc:110045	73	64.306	ENSAMEG00000001697	-	97	63.912	Ailuropoda_melanoleuca
ENSAMXG00000001760	zgc:110045	73	66.667	ENSACIG00000010933	pcbp3	94	67.568	Amphilophus_citrinellus
ENSAMXG00000001760	zgc:110045	72	68.468	ENSACIG00000002739	-	95	68.468	Amphilophus_citrinellus
ENSAMXG00000001760	zgc:110045	73	67.372	ENSAOCG00000008592	-	96	67.372	Amphiprion_ocellaris
ENSAMXG00000001760	zgc:110045	66	67.869	ENSAOCG00000007806	-	95	67.869	Amphiprion_ocellaris
ENSAMXG00000001760	zgc:110045	73	64.387	ENSAPEG00000008011	pcbp3	94	64.387	Amphiprion_percula
ENSAMXG00000001760	zgc:110045	72	68.902	ENSAPEG00000005209	-	95	68.902	Amphiprion_percula
ENSAMXG00000001760	zgc:110045	72	66.864	ENSATEG00000015787	-	98	66.864	Anabas_testudineus
ENSAMXG00000001760	zgc:110045	72	69.538	ENSATEG00000009833	-	95	69.538	Anabas_testudineus
ENSAMXG00000001760	zgc:110045	100	62.947	ENSAPLG00000008951	-	100	64.211	Anas_platyrhynchos
ENSAMXG00000001760	zgc:110045	73	64.689	ENSAPLG00000002975	-	97	64.689	Anas_platyrhynchos
ENSAMXG00000001760	zgc:110045	73	62.634	ENSACAG00000004607	-	97	62.634	Anolis_carolinensis
ENSAMXG00000001760	zgc:110045	74	67.978	ENSACAG00000009819	-	97	67.978	Anolis_carolinensis
ENSAMXG00000001760	zgc:110045	57	68.077	ENSANAG00000030702	-	96	68.077	Aotus_nancymaae
ENSAMXG00000001760	zgc:110045	72	70.186	ENSACLG00000003801	-	95	70.186	Astatotilapia_calliptera
ENSAMXG00000001760	zgc:110045	73	64.103	ENSACLG00000011835	pcbp3	94	64.103	Astatotilapia_calliptera
ENSAMXG00000001760	zgc:110045	68	64.865	ENSCAFG00020019472	-	83	64.865	Canis_lupus_dingo
ENSAMXG00000001760	zgc:110045	73	67.964	ENSCSAG00000007440	-	88	67.964	Chlorocebus_sabaeus
ENSAMXG00000001760	zgc:110045	100	64.076	ENSCPBG00000000733	-	100	68.037	Chrysemys_picta_bellii
ENSAMXG00000001760	zgc:110045	73	67.353	ENSCPBG00000012151	-	97	63.611	Chrysemys_picta_bellii
ENSAMXG00000001760	zgc:110045	72	69.062	ENSCSEG00000000822	pcbp3	96	69.062	Cynoglossus_semilaevis
ENSAMXG00000001760	zgc:110045	72	61.818	ENSCSEG00000016984	-	95	61.818	Cynoglossus_semilaevis
ENSAMXG00000001760	zgc:110045	73	64.387	ENSCVAG00000014482	pcbp3	94	64.387	Cyprinodon_variegatus
ENSAMXG00000001760	zgc:110045	72	69.207	ENSCVAG00000005262	-	95	69.207	Cyprinodon_variegatus
ENSAMXG00000001760	zgc:110045	73	65.330	ENSDARG00000054378	pcbp3	95	65.805	Danio_rerio
ENSAMXG00000001760	zgc:110045	73	59.412	ENSETEG00000015988	-	97	59.412	Echinops_telfairi
ENSAMXG00000001760	zgc:110045	73	56.471	ENSEBUG00000005495	pcbp3	67	56.471	Eptatretus_burgeri
ENSAMXG00000001760	zgc:110045	99	57.543	ENSEBUG00000007485	-	99	57.974	Eptatretus_burgeri
ENSAMXG00000001760	zgc:110045	67	61.184	ENSEBUG00000016192	pcbp3	99	61.258	Eptatretus_burgeri
ENSAMXG00000001760	zgc:110045	72	67.477	ENSELUG00000001560	-	94	63.533	Esox_lucius
ENSAMXG00000001760	zgc:110045	71	66.875	ENSELUG00000003521	pcbp3	93	66.875	Esox_lucius
ENSAMXG00000001760	zgc:110045	100	65.208	ENSFALG00000004411	-	100	65.833	Ficedula_albicollis
ENSAMXG00000001760	zgc:110045	73	67.353	ENSFALG00000003949	-	97	67.353	Ficedula_albicollis
ENSAMXG00000001760	zgc:110045	73	69.350	ENSFHEG00000016615	pcbp3	93	69.350	Fundulus_heteroclitus
ENSAMXG00000001760	zgc:110045	72	69.207	ENSFHEG00000006539	-	95	69.207	Fundulus_heteroclitus
ENSAMXG00000001760	zgc:110045	74	56.389	ENSGMOG00000011992	pcbp3	97	56.944	Gadus_morhua
ENSAMXG00000001760	zgc:110045	72	52.408	ENSGMOG00000008611	-	98	52.408	Gadus_morhua
ENSAMXG00000001760	zgc:110045	73	63.243	ENSGALG00000004394	-	89	74.157	Gallus_gallus
ENSAMXG00000001760	zgc:110045	75	68.056	ENSGALG00000013155	-	98	70.294	Gallus_gallus
ENSAMXG00000001760	zgc:110045	73	67.372	ENSGAFG00000010274	-	93	67.372	Gambusia_affinis
ENSAMXG00000001760	zgc:110045	73	64.000	ENSGAFG00000011430	pcbp3	95	64.000	Gambusia_affinis
ENSAMXG00000001760	zgc:110045	72	64.368	ENSGACG00000002266	-	94	64.368	Gasterosteus_aculeatus
ENSAMXG00000001760	zgc:110045	72	57.923	ENSGACG00000014955	-	95	57.923	Gasterosteus_aculeatus
ENSAMXG00000001760	zgc:110045	82	64.083	ENSGAGG00000000271	-	99	71.959	Gopherus_agassizii
ENSAMXG00000001760	zgc:110045	51	78.212	ENSGAGG00000006956	-	74	78.212	Gopherus_agassizii
ENSAMXG00000001760	zgc:110045	73	66.567	ENSHBUG00000010697	pcbp3	98	66.567	Haplochromis_burtoni
ENSAMXG00000001760	zgc:110045	72	70.186	ENSHBUG00000021782	-	95	70.186	Haplochromis_burtoni
ENSAMXG00000001760	zgc:110045	73	64.571	ENSHCOG00000017868	pcbp3	94	64.571	Hippocampus_comes
ENSAMXG00000001760	zgc:110045	72	66.970	ENSHCOG00000006067	-	95	66.970	Hippocampus_comes
ENSAMXG00000001760	zgc:110045	72	69.565	ENSIPUG00000006238	pcbp3	95	69.565	Ictalurus_punctatus
ENSAMXG00000001760	zgc:110045	73	67.372	ENSKMAG00000018530	-	95	67.988	Kryptolebias_marmoratus
ENSAMXG00000001760	zgc:110045	81	57.828	ENSKMAG00000003046	pcbp3	94	64.387	Kryptolebias_marmoratus
ENSAMXG00000001760	zgc:110045	72	68.615	ENSLBEG00000006201	pcbp3	93	68.615	Labrus_bergylta
ENSAMXG00000001760	zgc:110045	73	62.733	ENSLBEG00000006542	-	94	63.240	Labrus_bergylta
ENSAMXG00000001760	zgc:110045	100	63.883	ENSLACG00000010804	zgc:110045	100	65.073	Latimeria_chalumnae
ENSAMXG00000001760	zgc:110045	99	54.947	ENSLACG00000010386	pcbp3	99	54.947	Latimeria_chalumnae
ENSAMXG00000001760	zgc:110045	100	65.762	ENSLOCG00000005058	zgc:110045	100	67.152	Lepisosteus_oculatus
ENSAMXG00000001760	zgc:110045	73	65.625	ENSLOCG00000009369	pcbp3	97	65.625	Lepisosteus_oculatus
ENSAMXG00000001760	zgc:110045	74	67.879	ENSMAMG00000022336	pcbp3	94	67.879	Mastacembelus_armatus
ENSAMXG00000001760	zgc:110045	72	69.538	ENSMAMG00000011620	-	95	69.538	Mastacembelus_armatus
ENSAMXG00000001760	zgc:110045	73	68.615	ENSMZEG00005014882	-	96	65.839	Maylandia_zebra
ENSAMXG00000001760	zgc:110045	73	64.756	ENSMZEG00005008993	pcbp3	96	65.043	Maylandia_zebra
ENSAMXG00000001760	zgc:110045	100	65.208	ENSMGAG00000006794	-	100	65.833	Meleagris_gallopavo
ENSAMXG00000001760	zgc:110045	74	59.517	ENSMGAG00000001883	-	97	59.517	Meleagris_gallopavo
ENSAMXG00000001760	zgc:110045	73	65.766	ENSMMOG00000000730	pcbp3	86	65.766	Mola_mola
ENSAMXG00000001760	zgc:110045	72	69.255	ENSMMOG00000005216	-	95	69.255	Mola_mola
ENSAMXG00000001760	zgc:110045	54	56.356	ENSMODG00000027884	-	94	56.356	Monodelphis_domestica
ENSAMXG00000001760	zgc:110045	76	64.326	ENSMALG00000000691	pcbp3	98	64.326	Monopterus_albus
ENSAMXG00000001760	zgc:110045	73	64.789	ENSMPUG00000001779	-	89	64.789	Mustela_putorius_furo
ENSAMXG00000001760	zgc:110045	73	67.477	ENSNBRG00000016714	-	96	68.085	Neolamprologus_brichardi
ENSAMXG00000001760	zgc:110045	73	65.982	ENSNBRG00000016409	-	94	65.982	Neolamprologus_brichardi
ENSAMXG00000001760	zgc:110045	73	63.288	ENSOPRG00000003431	-	99	63.288	Ochotona_princeps
ENSAMXG00000001760	zgc:110045	73	60.916	ENSONIG00000012122	-	97	60.916	Oreochromis_niloticus
ENSAMXG00000001760	zgc:110045	72	68.485	ENSONIG00000004611	-	95	68.485	Oreochromis_niloticus
ENSAMXG00000001760	zgc:110045	73	67.964	ENSOCUG00000002696	-	88	67.964	Oryctolagus_cuniculus
ENSAMXG00000001760	zgc:110045	72	67.683	ENSORLG00000000059	pcbp3	97	67.683	Oryzias_latipes
ENSAMXG00000001760	zgc:110045	73	67.674	ENSORLG00000022739	-	95	68.182	Oryzias_latipes
ENSAMXG00000001760	zgc:110045	72	67.683	ENSORLG00020012671	pcbp3	95	67.683	Oryzias_latipes_hni
ENSAMXG00000001760	zgc:110045	72	69.876	ENSORLG00020006124	-	95	69.876	Oryzias_latipes_hni
ENSAMXG00000001760	zgc:110045	72	67.683	ENSORLG00015000429	pcbp3	95	67.683	Oryzias_latipes_hsok
ENSAMXG00000001760	zgc:110045	73	67.674	ENSORLG00015008051	-	93	67.674	Oryzias_latipes_hsok
ENSAMXG00000001760	zgc:110045	72	70.186	ENSOMEG00000020162	-	95	70.186	Oryzias_melastigma
ENSAMXG00000001760	zgc:110045	66	69.863	ENSOMEG00000020811	pcbp3	92	69.863	Oryzias_melastigma
ENSAMXG00000001760	zgc:110045	73	61.867	ENSOGAG00000008044	-	97	61.867	Otolemur_garnettii
ENSAMXG00000001760	zgc:110045	76	65.896	ENSPKIG00000019329	pcbp3	95	69.753	Paramormyrops_kingsleyae
ENSAMXG00000001760	zgc:110045	52	76.536	ENSPKIG00000020913	-	80	76.536	Paramormyrops_kingsleyae
ENSAMXG00000001760	zgc:110045	82	64.083	ENSPSIG00000008350	-	100	65.810	Pelodiscus_sinensis
ENSAMXG00000001760	zgc:110045	73	56.497	ENSPSIG00000014970	-	96	56.780	Pelodiscus_sinensis
ENSAMXG00000001760	zgc:110045	76	62.810	ENSPMGG00000022383	pcbp3	98	62.810	Periophthalmus_magnuspinnatus
ENSAMXG00000001760	zgc:110045	73	59.701	ENSPMAG00000004551	pcbp3	89	59.701	Petromyzon_marinus
ENSAMXG00000001760	zgc:110045	51	72.928	ENSPMAG00000004637	-	94	72.928	Petromyzon_marinus
ENSAMXG00000001760	zgc:110045	73	65.909	ENSPCIG00000028092	-	97	65.909	Phascolarctos_cinereus
ENSAMXG00000001760	zgc:110045	72	67.164	ENSPLAG00000004074	-	89	67.164	Poecilia_latipinna
ENSAMXG00000001760	zgc:110045	74	61.580	ENSPLAG00000011449	pcbp3	88	61.580	Poecilia_latipinna
ENSAMXG00000001760	zgc:110045	72	70.405	ENSPMEG00000006653	-	93	70.405	Poecilia_mexicana
ENSAMXG00000001760	zgc:110045	76	62.398	ENSPMEG00000021239	pcbp3	98	62.398	Poecilia_mexicana
ENSAMXG00000001760	zgc:110045	72	69.876	ENSPREG00000020585	-	95	69.876	Poecilia_reticulata
ENSAMXG00000001760	zgc:110045	73	67.385	ENSPREG00000015736	pcbp3	98	67.385	Poecilia_reticulata
ENSAMXG00000001760	zgc:110045	73	67.169	ENSPNYG00000012326	pcbp3	94	67.169	Pundamilia_nyererei
ENSAMXG00000001760	zgc:110045	72	70.186	ENSPNYG00000013205	-	95	70.186	Pundamilia_nyererei
ENSAMXG00000001760	zgc:110045	72	69.159	ENSPNAG00000008541	-	96	69.159	Pygocentrus_nattereri
ENSAMXG00000001760	zgc:110045	59	89.423	ENSPNAG00000006838	zgc:110045	100	90.385	Pygocentrus_nattereri
ENSAMXG00000001760	zgc:110045	72	68.712	ENSPNAG00000015104	pcbp3	95	68.712	Pygocentrus_nattereri
ENSAMXG00000001760	zgc:110045	73	67.964	ENSRNOG00000001245	Pcbp3	97	67.964	Rattus_norvegicus
ENSAMXG00000001760	zgc:110045	73	61.429	ENSRBIG00000028177	-	97	57.330	Rhinopithecus_bieti
ENSAMXG00000001760	zgc:110045	73	64.124	ENSSHAG00000007890	-	97	64.124	Sarcophilus_harrisii
ENSAMXG00000001760	zgc:110045	73	67.378	ENSSFOG00015014706	pcbp3	93	67.378	Scleropages_formosus
ENSAMXG00000001760	zgc:110045	74	68.955	ENSSFOG00015007118	-	95	68.955	Scleropages_formosus
ENSAMXG00000001760	zgc:110045	76	65.896	ENSSFOG00015010205	pcbp3	98	65.896	Scleropages_formosus
ENSAMXG00000001760	zgc:110045	72	68.807	ENSSMAG00000003135	-	95	68.807	Scophthalmus_maximus
ENSAMXG00000001760	zgc:110045	72	69.375	ENSSMAG00000011929	pcbp3	95	69.375	Scophthalmus_maximus
ENSAMXG00000001760	zgc:110045	72	66.471	ENSSDUG00000011608	pcbp3	96	66.471	Seriola_dumerili
ENSAMXG00000001760	zgc:110045	73	66.667	ENSSDUG00000008502	-	99	64.634	Seriola_dumerili
ENSAMXG00000001760	zgc:110045	72	66.471	ENSSLDG00000008518	pcbp3	96	66.471	Seriola_lalandi_dorsalis
ENSAMXG00000001760	zgc:110045	73	67.674	ENSSLDG00000020161	-	93	67.674	Seriola_lalandi_dorsalis
ENSAMXG00000001760	zgc:110045	100	67.304	ENSSPUG00000013214	-	95	74.272	Sphenodon_punctatus
ENSAMXG00000001760	zgc:110045	73	56.647	ENSSPAG00000023341	-	93	58.036	Stegastes_partitus
ENSAMXG00000001760	zgc:110045	66	67.869	ENSSPAG00000004190	-	95	67.869	Stegastes_partitus
ENSAMXG00000001760	zgc:110045	73	69.461	ENSTGUG00000008158	-	97	69.461	Taeniopygia_guttata
ENSAMXG00000001760	zgc:110045	73	64.444	ENSTGUG00000003316	-	97	64.444	Taeniopygia_guttata
ENSAMXG00000001760	zgc:110045	73	67.761	ENSTRUG00000013604	pcbp3	94	67.160	Takifugu_rubripes
ENSAMXG00000001760	zgc:110045	66	70.408	ENSTRUG00000006280	-	85	70.408	Takifugu_rubripes
ENSAMXG00000001760	zgc:110045	73	61.230	ENSTTRG00000015075	-	97	62.097	Tursiops_truncatus
ENSAMXG00000001760	zgc:110045	73	63.611	ENSXETG00000011483	pcbp1	97	63.611	Xenopus_tropicalis
ENSAMXG00000001760	zgc:110045	92	66.055	ENSXETG00000010491	pcbp2	95	67.123	Xenopus_tropicalis
ENSAMXG00000001760	zgc:110045	76	62.398	ENSXCOG00000020481	pcbp3	98	62.398	Xiphophorus_couchianus
ENSAMXG00000001760	zgc:110045	73	64.387	ENSXMAG00000008175	pcbp3	94	64.387	Xiphophorus_maculatus
ENSAMXG00000001760	zgc:110045	73	67.674	ENSXMAG00000028711	-	95	66.962	Xiphophorus_maculatus