EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000001800 (Gene tree)
Gene ID: 103046918
Gene Symbol: polr2h
Alias: zgc:110289
Full Name: RNA polymerase II subunit H
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 2761 bases
Position: chr5:23284891-23287651
Accession: 103046918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000001836	RNA_pol_Rpb8	PF03870.15	2.2e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000001836	-	777	XM_007256793	ENSAMXP00000001836	150 (aa)	XP_007256855	W5K2M5

Gene Model

Click here to download ENSAMXG00000001800's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03020	RNA polymerase	KEGG
amex04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000001800's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000001800	polr2h	100	96.000	ENSG00000163882	POLR2H	100	96.000	Homo_sapiens
ENSAMXG00000001800	polr2h	100	99.333	ENSAPOG00000023660	polr2h	100	99.333	Acanthochromis_polyacanthus
ENSAMXG00000001800	polr2h	100	96.000	ENSAMEG00000017011	POLR2H	100	96.000	Ailuropoda_melanoleuca
ENSAMXG00000001800	polr2h	76	97.368	ENSACIG00000013167	polr2h	100	97.368	Amphilophus_citrinellus
ENSAMXG00000001800	polr2h	100	99.333	ENSAOCG00000003084	polr2h	100	99.333	Amphiprion_ocellaris
ENSAMXG00000001800	polr2h	100	99.333	ENSAPEG00000002614	polr2h	100	99.333	Amphiprion_percula
ENSAMXG00000001800	polr2h	100	99.333	ENSATEG00000013227	polr2h	100	99.333	Anabas_testudineus
ENSAMXG00000001800	polr2h	100	96.000	ENSACAG00000002828	POLR2H	100	96.000	Anolis_carolinensis
ENSAMXG00000001800	polr2h	100	96.000	ENSANAG00000020244	POLR2H	100	96.000	Aotus_nancymaae
ENSAMXG00000001800	polr2h	100	99.333	ENSACLG00000026253	polr2h	100	99.333	Astatotilapia_calliptera
ENSAMXG00000001800	polr2h	100	96.000	ENSBTAG00000040199	POLR2H	100	96.000	Bos_taurus
ENSAMXG00000001800	polr2h	100	62.667	WBGene00017830	rpb-8	100	62.667	Caenorhabditis_elegans
ENSAMXG00000001800	polr2h	100	96.000	ENSCJAG00000014959	POLR2H	100	96.000	Callithrix_jacchus
ENSAMXG00000001800	polr2h	100	96.000	ENSCAFG00020002558	POLR2H	100	96.000	Canis_lupus_dingo
ENSAMXG00000001800	polr2h	100	96.000	ENSCHIG00000006695	POLR2H	100	96.000	Capra_hircus
ENSAMXG00000001800	polr2h	100	90.667	ENSTSYG00000031691	-	82	90.667	Carlito_syrichta
ENSAMXG00000001800	polr2h	100	96.000	ENSTSYG00000007705	-	100	96.000	Carlito_syrichta
ENSAMXG00000001800	polr2h	100	82.119	ENSTSYG00000031988	-	100	82.119	Carlito_syrichta
ENSAMXG00000001800	polr2h	100	96.667	ENSCPOG00000040303	POLR2H	100	96.667	Cavia_porcellus
ENSAMXG00000001800	polr2h	100	96.000	ENSCCAG00000035087	POLR2H	100	96.000	Cebus_capucinus
ENSAMXG00000001800	polr2h	100	96.000	ENSCATG00000045313	POLR2H	100	96.000	Cercocebus_atys
ENSAMXG00000001800	polr2h	100	96.667	ENSCLAG00000013016	POLR2H	100	96.667	Chinchilla_lanigera
ENSAMXG00000001800	polr2h	100	96.000	ENSCSAG00000013724	POLR2H	80	96.000	Chlorocebus_sabaeus
ENSAMXG00000001800	polr2h	74	94.595	ENSCHOG00000009216	POLR2H	100	94.595	Choloepus_hoffmanni
ENSAMXG00000001800	polr2h	100	96.000	ENSCPBG00000001462	POLR2H	100	96.000	Chrysemys_picta_bellii
ENSAMXG00000001800	polr2h	99	74.667	ENSCING00000011417	-	99	74.667	Ciona_intestinalis
ENSAMXG00000001800	polr2h	99	74.000	ENSCSAVG00000006151	-	99	74.000	Ciona_savignyi
ENSAMXG00000001800	polr2h	100	96.000	ENSCANG00000023708	POLR2H	100	96.000	Colobus_angolensis_palliatus
ENSAMXG00000001800	polr2h	100	96.000	ENSCGRG00001004900	Polr2h	100	96.000	Cricetulus_griseus_chok1gshd
ENSAMXG00000001800	polr2h	100	96.000	ENSCGRG00000014304	Polr2h	100	96.000	Cricetulus_griseus_crigri
ENSAMXG00000001800	polr2h	100	97.333	ENSCSEG00000015264	polr2h	100	97.333	Cynoglossus_semilaevis
ENSAMXG00000001800	polr2h	100	98.667	ENSCVAG00000012410	polr2h	100	98.667	Cyprinodon_variegatus
ENSAMXG00000001800	polr2h	100	98.667	ENSDARG00000038505	polr2h	100	98.667	Danio_rerio
ENSAMXG00000001800	polr2h	100	96.000	ENSDNOG00000044402	POLR2H	100	96.000	Dasypus_novemcinctus
ENSAMXG00000001800	polr2h	100	96.000	ENSDORG00000027475	Polr2h	100	96.000	Dipodomys_ordii
ENSAMXG00000001800	polr2h	100	76.667	FBgn0037121	Rpb8	100	76.667	Drosophila_melanogaster
ENSAMXG00000001800	polr2h	100	58.000	ENSETEG00000004231	-	100	58.000	Echinops_telfairi
ENSAMXG00000001800	polr2h	100	74.857	ENSEBUG00000008233	POLR2H	100	74.857	Eptatretus_burgeri
ENSAMXG00000001800	polr2h	100	96.000	ENSEASG00005013088	POLR2H	100	96.000	Equus_asinus_asinus
ENSAMXG00000001800	polr2h	100	96.000	ENSECAG00000005828	POLR2H	100	96.000	Equus_caballus
ENSAMXG00000001800	polr2h	55	93.976	ENSEEUG00000006139	-	100	93.976	Erinaceus_europaeus
ENSAMXG00000001800	polr2h	100	98.000	ENSELUG00000006347	polr2h	100	98.000	Esox_lucius
ENSAMXG00000001800	polr2h	100	96.000	ENSFCAG00000007797	POLR2H	100	96.000	Felis_catus
ENSAMXG00000001800	polr2h	100	96.000	ENSFALG00000008177	POLR2H	100	96.000	Ficedula_albicollis
ENSAMXG00000001800	polr2h	100	96.000	ENSFDAG00000008781	POLR2H	100	96.000	Fukomys_damarensis
ENSAMXG00000001800	polr2h	100	98.667	ENSFHEG00000017819	polr2h	100	98.667	Fundulus_heteroclitus
ENSAMXG00000001800	polr2h	100	96.000	ENSGALG00000008534	POLR2H	100	96.000	Gallus_gallus
ENSAMXG00000001800	polr2h	100	98.667	ENSGAFG00000015424	polr2h	100	98.667	Gambusia_affinis
ENSAMXG00000001800	polr2h	100	98.000	ENSGACG00000009019	polr2h	100	98.000	Gasterosteus_aculeatus
ENSAMXG00000001800	polr2h	100	96.000	ENSGAGG00000009016	POLR2H	100	96.000	Gopherus_agassizii
ENSAMXG00000001800	polr2h	83	96.000	ENSGGOG00000002912	-	100	96.000	Gorilla_gorilla
ENSAMXG00000001800	polr2h	100	99.333	ENSHBUG00000006685	polr2h	100	99.333	Haplochromis_burtoni
ENSAMXG00000001800	polr2h	100	96.000	ENSHGLG00000012488	POLR2H	100	96.000	Heterocephalus_glaber_female
ENSAMXG00000001800	polr2h	100	96.000	ENSHGLG00100009576	POLR2H	100	96.000	Heterocephalus_glaber_male
ENSAMXG00000001800	polr2h	100	98.667	ENSHCOG00000010338	polr2h	100	98.667	Hippocampus_comes
ENSAMXG00000001800	polr2h	100	98.667	ENSHCOG00000010315	polr2h	100	98.667	Hippocampus_comes
ENSAMXG00000001800	polr2h	100	98.000	ENSIPUG00000024331	polr2h	100	98.000	Ictalurus_punctatus
ENSAMXG00000001800	polr2h	100	96.000	ENSSTOG00000008300	POLR2H	100	96.000	Ictidomys_tridecemlineatus
ENSAMXG00000001800	polr2h	100	96.000	ENSJJAG00000015574	Polr2h	100	96.000	Jaculus_jaculus
ENSAMXG00000001800	polr2h	100	99.333	ENSKMAG00000008353	polr2h	100	99.333	Kryptolebias_marmoratus
ENSAMXG00000001800	polr2h	100	99.333	ENSLBEG00000018905	polr2h	100	99.333	Labrus_bergylta
ENSAMXG00000001800	polr2h	100	96.667	ENSLACG00000015017	POLR2H	100	96.667	Latimeria_chalumnae
ENSAMXG00000001800	polr2h	75	97.321	ENSLOCG00000008946	polr2h	100	97.321	Lepisosteus_oculatus
ENSAMXG00000001800	polr2h	100	96.000	ENSLAFG00000003573	POLR2H	100	96.000	Loxodonta_africana
ENSAMXG00000001800	polr2h	100	96.000	ENSMFAG00000038115	POLR2H	100	96.000	Macaca_fascicularis
ENSAMXG00000001800	polr2h	100	96.000	ENSMMUG00000007524	POLR2H	100	96.000	Macaca_mulatta
ENSAMXG00000001800	polr2h	100	96.000	ENSMNEG00000037272	POLR2H	100	96.000	Macaca_nemestrina
ENSAMXG00000001800	polr2h	100	96.000	ENSMLEG00000039827	POLR2H	100	96.000	Mandrillus_leucophaeus
ENSAMXG00000001800	polr2h	100	98.667	ENSMAMG00000001923	polr2h	100	98.667	Mastacembelus_armatus
ENSAMXG00000001800	polr2h	100	99.333	ENSMZEG00005017494	polr2h	100	99.333	Maylandia_zebra
ENSAMXG00000001800	polr2h	100	96.000	ENSMAUG00000016338	Polr2h	100	96.000	Mesocricetus_auratus
ENSAMXG00000001800	polr2h	100	74.000	ENSMICG00000033578	-	100	74.000	Microcebus_murinus
ENSAMXG00000001800	polr2h	100	96.000	ENSMICG00000048991	-	100	96.000	Microcebus_murinus
ENSAMXG00000001800	polr2h	96	94.444	ENSMICG00000027485	-	94	94.444	Microcebus_murinus
ENSAMXG00000001800	polr2h	100	96.000	ENSMOCG00000004886	Polr2h	100	96.000	Microtus_ochrogaster
ENSAMXG00000001800	polr2h	100	99.333	ENSMMOG00000008575	polr2h	100	99.333	Mola_mola
ENSAMXG00000001800	polr2h	100	96.000	ENSMODG00000002570	POLR2H	100	96.000	Monodelphis_domestica
ENSAMXG00000001800	polr2h	100	98.667	ENSMALG00000015108	polr2h	100	98.667	Monopterus_albus
ENSAMXG00000001800	polr2h	100	96.000	MGP_CAROLIEiJ_G0020589	Polr2h	100	96.000	Mus_caroli
ENSAMXG00000001800	polr2h	100	96.000	ENSMUSG00000021018	Polr2h	100	96.000	Mus_musculus
ENSAMXG00000001800	polr2h	100	96.000	MGP_SPRETEiJ_G0021486	Polr2h	100	96.000	Mus_spretus
ENSAMXG00000001800	polr2h	100	96.000	ENSMPUG00000002852	POLR2H	100	96.000	Mustela_putorius_furo
ENSAMXG00000001800	polr2h	100	96.000	ENSMLUG00000022295	POLR2H	100	96.000	Myotis_lucifugus
ENSAMXG00000001800	polr2h	100	96.000	ENSNGAG00000023997	-	100	96.000	Nannospalax_galili
ENSAMXG00000001800	polr2h	100	76.667	ENSNGAG00000015806	-	100	76.667	Nannospalax_galili
ENSAMXG00000001800	polr2h	100	99.333	ENSNBRG00000001133	polr2h	100	99.333	Neolamprologus_brichardi
ENSAMXG00000001800	polr2h	100	96.000	ENSNLEG00000029447	POLR2H	100	96.000	Nomascus_leucogenys
ENSAMXG00000001800	polr2h	60	95.556	ENSMEUG00000014141	-	100	95.556	Notamacropus_eugenii
ENSAMXG00000001800	polr2h	55	95.181	ENSOPRG00000015024	-	100	95.181	Ochotona_princeps
ENSAMXG00000001800	polr2h	100	96.667	ENSODEG00000013008	-	100	96.667	Octodon_degus
ENSAMXG00000001800	polr2h	100	96.667	ENSODEG00000020005	-	100	96.667	Octodon_degus
ENSAMXG00000001800	polr2h	100	99.333	ENSONIG00000012493	polr2h	100	99.333	Oreochromis_niloticus
ENSAMXG00000001800	polr2h	100	96.000	ENSOANG00000010454	POLR2H	100	96.000	Ornithorhynchus_anatinus
ENSAMXG00000001800	polr2h	100	96.000	ENSOCUG00000007078	POLR2H	100	96.000	Oryctolagus_cuniculus
ENSAMXG00000001800	polr2h	100	99.333	ENSORLG00000023347	polr2h	100	99.333	Oryzias_latipes
ENSAMXG00000001800	polr2h	100	99.333	ENSORLG00020017770	polr2h	100	99.333	Oryzias_latipes_hni
ENSAMXG00000001800	polr2h	100	99.333	ENSORLG00015013505	polr2h	100	99.333	Oryzias_latipes_hsok
ENSAMXG00000001800	polr2h	100	99.333	ENSOMEG00000021100	polr2h	100	99.333	Oryzias_melastigma
ENSAMXG00000001800	polr2h	100	96.000	ENSOGAG00000001599	POLR2H	100	96.000	Otolemur_garnettii
ENSAMXG00000001800	polr2h	100	96.000	ENSOARG00000020584	POLR2H	100	96.000	Ovis_aries
ENSAMXG00000001800	polr2h	100	96.000	ENSPPAG00000035658	-	100	96.000	Pan_paniscus
ENSAMXG00000001800	polr2h	100	96.000	ENSPPRG00000004001	POLR2H	100	96.000	Panthera_pardus
ENSAMXG00000001800	polr2h	100	96.000	ENSPTIG00000010551	POLR2H	100	96.000	Panthera_tigris_altaica
ENSAMXG00000001800	polr2h	100	96.000	ENSPTRG00000047600	-	100	78.000	Pan_troglodytes
ENSAMXG00000001800	polr2h	100	96.000	ENSPANG00000020585	POLR2H	100	96.000	Papio_anubis
ENSAMXG00000001800	polr2h	100	99.333	ENSPKIG00000022836	polr2h	100	99.333	Paramormyrops_kingsleyae
ENSAMXG00000001800	polr2h	76	95.614	ENSPSIG00000017108	POLR2H	100	95.614	Pelodiscus_sinensis
ENSAMXG00000001800	polr2h	100	98.000	ENSPMGG00000004693	polr2h	94	98.000	Periophthalmus_magnuspinnatus
ENSAMXG00000001800	polr2h	100	92.000	ENSPMAG00000008230	-	100	92.000	Petromyzon_marinus
ENSAMXG00000001800	polr2h	100	98.667	ENSPFOG00000024200	polr2h	100	98.667	Poecilia_formosa
ENSAMXG00000001800	polr2h	100	98.667	ENSPLAG00000024033	polr2h	100	98.667	Poecilia_latipinna
ENSAMXG00000001800	polr2h	100	98.667	ENSPMEG00000005909	polr2h	100	98.667	Poecilia_mexicana
ENSAMXG00000001800	polr2h	100	98.667	ENSPREG00000007275	polr2h	100	98.667	Poecilia_reticulata
ENSAMXG00000001800	polr2h	100	96.000	ENSPPYG00000014357	-	100	96.000	Pongo_abelii
ENSAMXG00000001800	polr2h	100	67.333	ENSPCAG00000015035	-	100	67.333	Procavia_capensis
ENSAMXG00000001800	polr2h	100	96.000	ENSPCOG00000021194	POLR2H	100	96.000	Propithecus_coquereli
ENSAMXG00000001800	polr2h	100	82.667	ENSPVAG00000004869	POLR2H	100	82.667	Pteropus_vampyrus
ENSAMXG00000001800	polr2h	100	99.333	ENSPNYG00000020592	polr2h	100	99.333	Pundamilia_nyererei
ENSAMXG00000001800	polr2h	100	98.667	ENSPNAG00000010676	polr2h	100	98.667	Pygocentrus_nattereri
ENSAMXG00000001800	polr2h	100	96.000	ENSRNOG00000049116	Polr2h	100	96.000	Rattus_norvegicus
ENSAMXG00000001800	polr2h	100	96.000	ENSRNOG00000001748	LOC100912534	100	96.000	Rattus_norvegicus
ENSAMXG00000001800	polr2h	100	96.000	ENSRBIG00000032148	POLR2H	100	96.000	Rhinopithecus_bieti
ENSAMXG00000001800	polr2h	100	96.000	ENSRROG00000040465	POLR2H	100	96.000	Rhinopithecus_roxellana
ENSAMXG00000001800	polr2h	98	36.364	YOR224C	RPB8	100	36.364	Saccharomyces_cerevisiae
ENSAMXG00000001800	polr2h	100	96.000	ENSSBOG00000033101	POLR2H	100	78.000	Saimiri_boliviensis_boliviensis
ENSAMXG00000001800	polr2h	84	96.032	ENSSHAG00000006304	POLR2H	91	96.032	Sarcophilus_harrisii
ENSAMXG00000001800	polr2h	100	100.000	ENSSFOG00015014221	polr2h	100	100.000	Scleropages_formosus
ENSAMXG00000001800	polr2h	100	99.333	ENSSMAG00000001049	polr2h	100	99.333	Scophthalmus_maximus
ENSAMXG00000001800	polr2h	100	99.333	ENSSDUG00000005936	polr2h	100	99.333	Seriola_dumerili
ENSAMXG00000001800	polr2h	100	99.333	ENSSLDG00000002246	polr2h	100	99.333	Seriola_lalandi_dorsalis
ENSAMXG00000001800	polr2h	100	96.000	ENSSARG00000003429	POLR2H	100	96.000	Sorex_araneus
ENSAMXG00000001800	polr2h	76	94.737	ENSSPUG00000014013	-	100	94.737	Sphenodon_punctatus
ENSAMXG00000001800	polr2h	100	99.333	ENSSPAG00000012297	polr2h	100	99.333	Stegastes_partitus
ENSAMXG00000001800	polr2h	100	96.000	ENSSSCG00000022507	POLR2H	100	96.000	Sus_scrofa
ENSAMXG00000001800	polr2h	95	95.775	ENSTGUG00000010383	POLR2H	99	95.775	Taeniopygia_guttata
ENSAMXG00000001800	polr2h	100	98.000	ENSTRUG00000007619	polr2h	100	98.000	Takifugu_rubripes
ENSAMXG00000001800	polr2h	100	98.667	ENSTNIG00000012183	polr2h	100	98.667	Tetraodon_nigroviridis
ENSAMXG00000001800	polr2h	100	58.000	ENSTBEG00000005571	-	100	58.000	Tupaia_belangeri
ENSAMXG00000001800	polr2h	100	96.000	ENSTTRG00000011254	POLR2H	100	96.000	Tursiops_truncatus
ENSAMXG00000001800	polr2h	100	96.000	ENSUAMG00000004615	POLR2H	100	96.000	Ursus_americanus
ENSAMXG00000001800	polr2h	100	96.000	ENSUMAG00000005255	POLR2H	100	96.000	Ursus_maritimus
ENSAMXG00000001800	polr2h	100	78.000	ENSVPAG00000009011	-	100	78.000	Vicugna_pacos
ENSAMXG00000001800	polr2h	100	96.000	ENSVVUG00000012241	POLR2H	100	96.000	Vulpes_vulpes
ENSAMXG00000001800	polr2h	100	94.000	ENSXETG00000017291	polr2h	100	94.000	Xenopus_tropicalis
ENSAMXG00000001800	polr2h	100	98.667	ENSXCOG00000003501	polr2h	100	98.667	Xiphophorus_couchianus
ENSAMXG00000001800	polr2h	100	98.667	ENSXMAG00000005861	polr2h	100	98.667	Xiphophorus_maculatus