EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000001999 (Gene tree)
Gene ID: 103032371
Gene Symbol: mrpl28
Alias: wu:fa96b11|zgc:110013
Full Name: mitochondrial ribosomal protein L28
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 7473 bases
Position: chr2:18266811-18274283
Accession: 103032371
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000002035	Ribosomal_L28	PF00830.19	1.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000002035	-	971	XM_007231022	ENSAMXP00000002035	253 (aa)	XP_007231084	W5K374

Gene Model

Click here to download ENSAMXG00000001999's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000001999's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000001999	mrpl28	99	66.270	ENSG00000086504	MRPL28	100	68.807	Homo_sapiens
ENSAMXG00000001999	mrpl28	99	74.206	ENSAPOG00000016883	mrpl28	100	74.206	Acanthochromis_polyacanthus
ENSAMXG00000001999	mrpl28	99	65.873	ENSAMEG00000007031	MRPL28	98	65.873	Ailuropoda_melanoleuca
ENSAMXG00000001999	mrpl28	99	74.206	ENSACIG00000005641	mrpl28	100	74.206	Amphilophus_citrinellus
ENSAMXG00000001999	mrpl28	99	75.494	ENSAOCG00000024148	mrpl28	96	79.638	Amphiprion_ocellaris
ENSAMXG00000001999	mrpl28	99	75.000	ENSAPEG00000010705	mrpl28	100	75.000	Amphiprion_percula
ENSAMXG00000001999	mrpl28	99	76.587	ENSATEG00000013085	mrpl28	100	76.587	Anabas_testudineus
ENSAMXG00000001999	mrpl28	55	70.922	ENSAPLG00000006257	MRPL28	100	70.922	Anas_platyrhynchos
ENSAMXG00000001999	mrpl28	97	61.328	ENSACAG00000015301	MRPL28	98	61.328	Anolis_carolinensis
ENSAMXG00000001999	mrpl28	99	65.476	ENSANAG00000022423	MRPL28	98	65.476	Aotus_nancymaae
ENSAMXG00000001999	mrpl28	99	73.413	ENSACLG00000017376	mrpl28	100	73.413	Astatotilapia_calliptera
ENSAMXG00000001999	mrpl28	99	66.667	ENSBTAG00000016581	MRPL28	92	66.667	Bos_taurus
ENSAMXG00000001999	mrpl28	99	62.451	ENSCAFG00000019682	MRPL28	98	63.241	Canis_familiaris
ENSAMXG00000001999	mrpl28	99	63.492	ENSCAFG00020009225	MRPL28	98	63.492	Canis_lupus_dingo
ENSAMXG00000001999	mrpl28	99	65.873	ENSCHIG00000016968	MRPL28	98	65.873	Capra_hircus
ENSAMXG00000001999	mrpl28	96	64.463	ENSTSYG00000032509	MRPL28	93	66.814	Carlito_syrichta
ENSAMXG00000001999	mrpl28	62	70.513	ENSCAPG00000011681	MRPL28	96	70.513	Cavia_aperea
ENSAMXG00000001999	mrpl28	99	68.254	ENSCPOG00000007176	MRPL28	98	68.254	Cavia_porcellus
ENSAMXG00000001999	mrpl28	99	65.737	ENSCCAG00000030887	MRPL28	98	65.737	Cebus_capucinus
ENSAMXG00000001999	mrpl28	98	68.145	ENSCATG00000040016	MRPL28	97	68.145	Cercocebus_atys
ENSAMXG00000001999	mrpl28	99	68.651	ENSCLAG00000014858	MRPL28	98	68.651	Chinchilla_lanigera
ENSAMXG00000001999	mrpl28	99	67.063	ENSCSAG00000012838	MRPL28	98	67.063	Chlorocebus_sabaeus
ENSAMXG00000001999	mrpl28	99	75.697	ENSCPBG00000026390	MRPL28	99	75.697	Chrysemys_picta_bellii
ENSAMXG00000001999	mrpl28	98	44.922	ENSCING00000023726	-	95	44.922	Ciona_intestinalis
ENSAMXG00000001999	mrpl28	88	43.348	ENSCSAVG00000003761	-	82	43.348	Ciona_savignyi
ENSAMXG00000001999	mrpl28	99	67.063	ENSCANG00000033941	MRPL28	98	67.063	Colobus_angolensis_palliatus
ENSAMXG00000001999	mrpl28	99	68.651	ENSCGRG00001012825	Mrpl28	98	68.651	Cricetulus_griseus_chok1gshd
ENSAMXG00000001999	mrpl28	99	68.651	ENSCGRG00000014549	Mrpl28	98	68.651	Cricetulus_griseus_crigri
ENSAMXG00000001999	mrpl28	99	74.603	ENSCSEG00000008095	mrpl28	100	74.603	Cynoglossus_semilaevis
ENSAMXG00000001999	mrpl28	99	73.810	ENSCVAG00000005123	mrpl28	100	73.810	Cyprinodon_variegatus
ENSAMXG00000001999	mrpl28	99	79.762	ENSDARG00000057805	mrpl28	100	79.762	Danio_rerio
ENSAMXG00000001999	mrpl28	61	71.613	ENSDORG00000024147	Mrpl28	97	71.613	Dipodomys_ordii
ENSAMXG00000001999	mrpl28	97	63.821	ENSEBUG00000004106	mrpl28	98	63.821	Eptatretus_burgeri
ENSAMXG00000001999	mrpl28	99	66.932	ENSEASG00005018175	MRPL28	97	66.932	Equus_asinus_asinus
ENSAMXG00000001999	mrpl28	99	66.534	ENSECAG00000022663	MRPL28	97	66.534	Equus_caballus
ENSAMXG00000001999	mrpl28	98	67.470	ENSEEUG00000006626	MRPL28	90	67.470	Erinaceus_europaeus
ENSAMXG00000001999	mrpl28	99	81.349	ENSELUG00000014104	mrpl28	100	81.349	Esox_lucius
ENSAMXG00000001999	mrpl28	99	65.476	ENSFCAG00000041050	MRPL28	98	65.476	Felis_catus
ENSAMXG00000001999	mrpl28	58	66.667	ENSFALG00000004103	MRPL28	96	66.667	Ficedula_albicollis
ENSAMXG00000001999	mrpl28	99	67.857	ENSFDAG00000011002	MRPL28	98	67.857	Fukomys_damarensis
ENSAMXG00000001999	mrpl28	99	73.123	ENSFHEG00000006545	mrpl28	100	73.123	Fundulus_heteroclitus
ENSAMXG00000001999	mrpl28	99	73.016	ENSGMOG00000010597	mrpl28	98	73.016	Gadus_morhua
ENSAMXG00000001999	mrpl28	96	67.490	ENSGALG00000007473	MRPL28	97	67.490	Gallus_gallus
ENSAMXG00000001999	mrpl28	99	73.307	ENSGAFG00000012123	mrpl28	99	73.307	Gambusia_affinis
ENSAMXG00000001999	mrpl28	100	74.308	ENSGACG00000009641	mrpl28	99	74.308	Gasterosteus_aculeatus
ENSAMXG00000001999	mrpl28	99	75.697	ENSGAGG00000023391	MRPL28	99	75.697	Gopherus_agassizii
ENSAMXG00000001999	mrpl28	99	66.667	ENSGGOG00000006668	MRPL28	98	66.667	Gorilla_gorilla
ENSAMXG00000001999	mrpl28	87	76.923	ENSHBUG00000002357	mrpl28	94	76.923	Haplochromis_burtoni
ENSAMXG00000001999	mrpl28	99	68.651	ENSHGLG00000003807	MRPL28	98	68.651	Heterocephalus_glaber_female
ENSAMXG00000001999	mrpl28	99	68.651	ENSHGLG00100012704	MRPL28	98	68.651	Heterocephalus_glaber_male
ENSAMXG00000001999	mrpl28	99	73.413	ENSHCOG00000000219	mrpl28	100	73.413	Hippocampus_comes
ENSAMXG00000001999	mrpl28	100	87.747	ENSIPUG00000015984	mrpl28	100	87.747	Ictalurus_punctatus
ENSAMXG00000001999	mrpl28	99	65.873	ENSSTOG00000012316	MRPL28	97	65.873	Ictidomys_tridecemlineatus
ENSAMXG00000001999	mrpl28	99	67.063	ENSJJAG00000008947	Mrpl28	98	67.063	Jaculus_jaculus
ENSAMXG00000001999	mrpl28	99	75.794	ENSKMAG00000021277	mrpl28	100	75.794	Kryptolebias_marmoratus
ENSAMXG00000001999	mrpl28	99	70.196	ENSLBEG00000020499	mrpl28	100	70.196	Labrus_bergylta
ENSAMXG00000001999	mrpl28	100	59.245	ENSLACG00000009989	MRPL28	100	59.245	Latimeria_chalumnae
ENSAMXG00000001999	mrpl28	99	76.984	ENSLOCG00000014850	mrpl28	99	76.984	Lepisosteus_oculatus
ENSAMXG00000001999	mrpl28	99	64.683	ENSLAFG00000010776	MRPL28	99	64.683	Loxodonta_africana
ENSAMXG00000001999	mrpl28	99	67.063	ENSMFAG00000006698	MRPL28	98	67.063	Macaca_fascicularis
ENSAMXG00000001999	mrpl28	99	66.667	ENSMMUG00000000609	MRPL28	98	66.667	Macaca_mulatta
ENSAMXG00000001999	mrpl28	99	67.331	ENSMNEG00000027279	MRPL28	98	67.331	Macaca_nemestrina
ENSAMXG00000001999	mrpl28	99	67.063	ENSMLEG00000002439	MRPL28	98	67.063	Mandrillus_leucophaeus
ENSAMXG00000001999	mrpl28	99	73.413	ENSMAMG00000011487	mrpl28	100	73.413	Mastacembelus_armatus
ENSAMXG00000001999	mrpl28	99	73.413	ENSMZEG00005016524	mrpl28	100	73.413	Maylandia_zebra
ENSAMXG00000001999	mrpl28	99	67.857	ENSMAUG00000003487	Mrpl28	98	67.857	Mesocricetus_auratus
ENSAMXG00000001999	mrpl28	99	67.063	ENSMICG00000031344	MRPL28	98	67.063	Microcebus_murinus
ENSAMXG00000001999	mrpl28	99	68.254	ENSMOCG00000014836	Mrpl28	98	68.254	Microtus_ochrogaster
ENSAMXG00000001999	mrpl28	99	75.794	ENSMMOG00000012412	mrpl28	100	75.794	Mola_mola
ENSAMXG00000001999	mrpl28	99	69.444	ENSMODG00000016666	MRPL28	99	69.444	Monodelphis_domestica
ENSAMXG00000001999	mrpl28	99	76.096	ENSMALG00000011904	mrpl28	100	76.096	Monopterus_albus
ENSAMXG00000001999	mrpl28	99	65.476	MGP_CAROLIEiJ_G0021273	Mrpl28	98	65.476	Mus_caroli
ENSAMXG00000001999	mrpl28	99	65.476	ENSMUSG00000024181	Mrpl28	98	65.476	Mus_musculus
ENSAMXG00000001999	mrpl28	99	65.737	MGP_PahariEiJ_G0023591	Mrpl28	98	65.737	Mus_pahari
ENSAMXG00000001999	mrpl28	99	65.476	MGP_SPRETEiJ_G0022184	Mrpl28	98	65.476	Mus_spretus
ENSAMXG00000001999	mrpl28	99	66.667	ENSMPUG00000016020	MRPL28	98	66.667	Mustela_putorius_furo
ENSAMXG00000001999	mrpl28	99	67.460	ENSMLUG00000010009	MRPL28	98	67.460	Myotis_lucifugus
ENSAMXG00000001999	mrpl28	87	70.136	ENSNGAG00000016312	Mrpl28	95	70.136	Nannospalax_galili
ENSAMXG00000001999	mrpl28	99	73.810	ENSNBRG00000005544	mrpl28	100	73.810	Neolamprologus_brichardi
ENSAMXG00000001999	mrpl28	99	66.270	ENSNLEG00000031011	MRPL28	98	66.270	Nomascus_leucogenys
ENSAMXG00000001999	mrpl28	99	70.238	ENSMEUG00000000407	MRPL28	98	70.238	Notamacropus_eugenii
ENSAMXG00000001999	mrpl28	99	69.048	ENSODEG00000015538	MRPL28	98	69.048	Octodon_degus
ENSAMXG00000001999	mrpl28	99	73.810	ENSONIG00000005965	mrpl28	100	73.810	Oreochromis_niloticus
ENSAMXG00000001999	mrpl28	99	76.587	ENSORLG00000006806	mrpl28	100	76.587	Oryzias_latipes
ENSAMXG00000001999	mrpl28	99	76.587	ENSORLG00020002937	mrpl28	100	76.587	Oryzias_latipes_hni
ENSAMXG00000001999	mrpl28	99	76.190	ENSORLG00015005123	mrpl28	100	76.190	Oryzias_latipes_hsok
ENSAMXG00000001999	mrpl28	99	75.397	ENSOMEG00000013553	mrpl28	100	75.397	Oryzias_melastigma
ENSAMXG00000001999	mrpl28	98	67.339	ENSOGAG00000014941	MRPL28	97	67.339	Otolemur_garnettii
ENSAMXG00000001999	mrpl28	99	65.873	ENSOARG00000011786	MRPL28	98	65.873	Ovis_aries
ENSAMXG00000001999	mrpl28	99	65.873	ENSPPAG00000034473	MRPL28	98	65.873	Pan_paniscus
ENSAMXG00000001999	mrpl28	99	65.476	ENSPPRG00000002937	MRPL28	98	65.476	Panthera_pardus
ENSAMXG00000001999	mrpl28	99	65.476	ENSPTIG00000017626	MRPL28	98	65.476	Panthera_tigris_altaica
ENSAMXG00000001999	mrpl28	99	66.270	ENSPTRG00000047553	MRPL28	98	66.270	Pan_troglodytes
ENSAMXG00000001999	mrpl28	99	67.460	ENSPANG00000018773	MRPL28	98	67.460	Papio_anubis
ENSAMXG00000001999	mrpl28	99	76.494	ENSPKIG00000010370	mrpl28	100	76.494	Paramormyrops_kingsleyae
ENSAMXG00000001999	mrpl28	94	73.640	ENSPSIG00000011177	MRPL28	98	73.640	Pelodiscus_sinensis
ENSAMXG00000001999	mrpl28	99	75.697	ENSPMGG00000014190	mrpl28	99	75.697	Periophthalmus_magnuspinnatus
ENSAMXG00000001999	mrpl28	100	68.379	ENSPEMG00000019054	Mrpl28	98	68.379	Peromyscus_maniculatus_bairdii
ENSAMXG00000001999	mrpl28	100	64.567	ENSPMAG00000004202	mrpl28	99	64.567	Petromyzon_marinus
ENSAMXG00000001999	mrpl28	99	69.444	ENSPCIG00000000377	MRPL28	88	69.444	Phascolarctos_cinereus
ENSAMXG00000001999	mrpl28	99	71.825	ENSPFOG00000009485	mrpl28	100	71.825	Poecilia_formosa
ENSAMXG00000001999	mrpl28	99	71.825	ENSPLAG00000020059	mrpl28	100	71.825	Poecilia_latipinna
ENSAMXG00000001999	mrpl28	99	72.222	ENSPMEG00000012919	mrpl28	100	72.222	Poecilia_mexicana
ENSAMXG00000001999	mrpl28	99	70.635	ENSPREG00000022968	mrpl28	100	70.635	Poecilia_reticulata
ENSAMXG00000001999	mrpl28	87	69.231	ENSPPYG00000006906	MRPL28	100	69.231	Pongo_abelii
ENSAMXG00000001999	mrpl28	99	66.270	ENSPCAG00000011480	MRPL28	98	66.270	Procavia_capensis
ENSAMXG00000001999	mrpl28	99	65.873	ENSPCOG00000021895	MRPL28	98	65.873	Propithecus_coquereli
ENSAMXG00000001999	mrpl28	99	56.349	ENSPVAG00000000551	MRPL28	98	56.349	Pteropus_vampyrus
ENSAMXG00000001999	mrpl28	87	76.471	ENSPNYG00000005347	mrpl28	94	76.471	Pundamilia_nyererei
ENSAMXG00000001999	mrpl28	100	87.352	ENSPNAG00000009296	mrpl28	100	87.352	Pygocentrus_nattereri
ENSAMXG00000001999	mrpl28	99	65.476	ENSRNOG00000042720	Mrpl28	98	65.476	Rattus_norvegicus
ENSAMXG00000001999	mrpl28	99	66.667	ENSRBIG00000029953	MRPL28	98	66.667	Rhinopithecus_bieti
ENSAMXG00000001999	mrpl28	99	66.270	ENSRROG00000042756	MRPL28	98	66.270	Rhinopithecus_roxellana
ENSAMXG00000001999	mrpl28	98	66.265	ENSSBOG00000019789	MRPL28	98	66.265	Saimiri_boliviensis_boliviensis
ENSAMXG00000001999	mrpl28	99	71.032	ENSSHAG00000007606	MRPL28	99	71.032	Sarcophilus_harrisii
ENSAMXG00000001999	mrpl28	99	79.365	ENSSFOG00015006866	mrpl28	100	79.365	Scleropages_formosus
ENSAMXG00000001999	mrpl28	99	73.810	ENSSMAG00000013912	mrpl28	100	73.810	Scophthalmus_maximus
ENSAMXG00000001999	mrpl28	99	75.397	ENSSDUG00000005764	mrpl28	100	75.397	Seriola_dumerili
ENSAMXG00000001999	mrpl28	99	75.397	ENSSLDG00000000409	mrpl28	100	75.397	Seriola_lalandi_dorsalis
ENSAMXG00000001999	mrpl28	58	62.162	ENSSARG00000006277	-	98	62.162	Sorex_araneus
ENSAMXG00000001999	mrpl28	98	72.065	ENSSPUG00000015322	MRPL28	98	72.065	Sphenodon_punctatus
ENSAMXG00000001999	mrpl28	99	74.206	ENSSPAG00000011153	mrpl28	100	74.206	Stegastes_partitus
ENSAMXG00000001999	mrpl28	98	65.462	ENSSSCG00000007984	MRPL28	97	65.462	Sus_scrofa
ENSAMXG00000001999	mrpl28	99	74.603	ENSTRUG00000019877	mrpl28	100	74.603	Takifugu_rubripes
ENSAMXG00000001999	mrpl28	99	76.587	ENSTNIG00000007746	mrpl28	100	76.587	Tetraodon_nigroviridis
ENSAMXG00000001999	mrpl28	93	66.807	ENSTNIG00000002347	-	100	66.807	Tetraodon_nigroviridis
ENSAMXG00000001999	mrpl28	99	66.667	ENSUAMG00000015724	MRPL28	94	66.667	Ursus_americanus
ENSAMXG00000001999	mrpl28	99	67.063	ENSUMAG00000021029	MRPL28	98	67.063	Ursus_maritimus
ENSAMXG00000001999	mrpl28	60	61.988	ENSVVUG00000013414	MRPL28	61	61.988	Vulpes_vulpes
ENSAMXG00000001999	mrpl28	100	66.798	ENSXETG00000011564	mrpl28	99	66.798	Xenopus_tropicalis
ENSAMXG00000001999	mrpl28	99	72.222	ENSXCOG00000012655	mrpl28	100	72.222	Xiphophorus_couchianus
ENSAMXG00000001999	mrpl28	99	71.825	ENSXMAG00000004293	mrpl28	100	71.825	Xiphophorus_maculatus