EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000002260 (Gene tree)
Gene ID: 103039727
Gene Symbol: eefsec
Alias: zgc:123265
Full Name: eukaryotic elongation factor%2C selenocysteine-tRNA specific
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 6059 bases
Position: chr13:35741340-35747398
Accession: 103039727
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000002308	GTP_EFTU	PF00009.27	1.4e-28	1	1
ENSAMXP00000002308	MMR_HSR1	PF01926.23	1.4e-06	1	1
ENSAMXP00000002308	GTP_EFTU_D2	PF03144.25	6.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000002308	-	3064	XM_007254315	ENSAMXP00000002308	585 (aa)	XP_007254377	W5K3Z7

Gene Model

Click here to download ENSAMXG00000002260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000002260's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000002260	eefsec	97	62.104	ENSG00000132394	EEFSEC	99	62.771	Homo_sapiens
ENSAMXG00000002260	eefsec	98	75.000	ENSAPOG00000015931	eefsec	98	75.694	Acanthochromis_polyacanthus
ENSAMXG00000002260	eefsec	72	63.409	ENSAMEG00000015165	EEFSEC	87	63.409	Ailuropoda_melanoleuca
ENSAMXG00000002260	eefsec	62	83.534	ENSACIG00000022407	eefsec	99	82.869	Amphilophus_citrinellus
ENSAMXG00000002260	eefsec	98	75.000	ENSAOCG00000008603	eefsec	98	75.694	Amphiprion_ocellaris
ENSAMXG00000002260	eefsec	98	74.653	ENSAPEG00000017090	eefsec	98	75.000	Amphiprion_percula
ENSAMXG00000002260	eefsec	98	75.174	ENSATEG00000002753	eefsec	99	75.174	Anabas_testudineus
ENSAMXG00000002260	eefsec	72	66.975	ENSAPLG00000006745	EEFSEC	99	66.975	Anas_platyrhynchos
ENSAMXG00000002260	eefsec	97	62.104	ENSANAG00000032691	EEFSEC	99	62.104	Aotus_nancymaae
ENSAMXG00000002260	eefsec	98	74.828	ENSACLG00000024565	eefsec	98	83.267	Astatotilapia_calliptera
ENSAMXG00000002260	eefsec	97	63.744	ENSBTAG00000030962	EEFSEC	98	72.222	Bos_taurus
ENSAMXG00000002260	eefsec	87	33.012	WBGene00008133	efsc-1	92	32.630	Caenorhabditis_elegans
ENSAMXG00000002260	eefsec	97	61.770	ENSCJAG00000005387	EEFSEC	99	61.770	Callithrix_jacchus
ENSAMXG00000002260	eefsec	97	62.687	ENSCAFG00000004135	EEFSEC	81	61.990	Canis_familiaris
ENSAMXG00000002260	eefsec	97	62.687	ENSCAFG00020004811	EEFSEC	99	62.687	Canis_lupus_dingo
ENSAMXG00000002260	eefsec	97	63.051	ENSCHIG00000021838	EEFSEC	99	63.390	Capra_hircus
ENSAMXG00000002260	eefsec	97	62.604	ENSTSYG00000012922	EEFSEC	99	62.604	Carlito_syrichta
ENSAMXG00000002260	eefsec	82	56.225	ENSCAPG00000000084	EEFSEC	98	56.225	Cavia_aperea
ENSAMXG00000002260	eefsec	97	62.818	ENSCPOG00000024352	EEFSEC	91	71.255	Cavia_porcellus
ENSAMXG00000002260	eefsec	97	61.603	ENSCCAG00000031336	EEFSEC	99	61.603	Cebus_capucinus
ENSAMXG00000002260	eefsec	97	62.104	ENSCATG00000019414	EEFSEC	99	62.104	Cercocebus_atys
ENSAMXG00000002260	eefsec	97	62.755	ENSCLAG00000006973	EEFSEC	91	71.660	Chinchilla_lanigera
ENSAMXG00000002260	eefsec	97	62.270	ENSCSAG00000008599	EEFSEC	99	62.270	Chlorocebus_sabaeus
ENSAMXG00000002260	eefsec	98	65.470	ENSCPBG00000014356	EEFSEC	90	64.775	Chrysemys_picta_bellii
ENSAMXG00000002260	eefsec	98	57.290	ENSCSAVG00000002208	-	100	57.047	Ciona_savignyi
ENSAMXG00000002260	eefsec	97	62.207	ENSCANG00000031492	EEFSEC	99	62.542	Colobus_angolensis_palliatus
ENSAMXG00000002260	eefsec	97	63.220	ENSCGRG00001018089	Eefsec	99	63.220	Cricetulus_griseus_chok1gshd
ENSAMXG00000002260	eefsec	97	62.818	ENSCGRG00000010063	Eefsec	91	70.850	Cricetulus_griseus_crigri
ENSAMXG00000002260	eefsec	99	73.299	ENSCSEG00000003008	eefsec	99	82.470	Cynoglossus_semilaevis
ENSAMXG00000002260	eefsec	98	74.216	ENSCVAG00000005381	eefsec	98	74.216	Cyprinodon_variegatus
ENSAMXG00000002260	eefsec	98	85.340	ENSDARG00000004696	eefsec	99	85.340	Danio_rerio
ENSAMXG00000002260	eefsec	97	62.267	ENSDNOG00000008925	EEFSEC	99	62.606	Dasypus_novemcinctus
ENSAMXG00000002260	eefsec	82	51.012	ENSDORG00000000264	Eefsec	85	69.841	Dipodomys_ordii
ENSAMXG00000002260	eefsec	97	47.276	FBgn0034627	eEFSec	99	47.276	Drosophila_melanogaster
ENSAMXG00000002260	eefsec	97	56.902	ENSETEG00000007406	EEFSEC	99	56.902	Echinops_telfairi
ENSAMXG00000002260	eefsec	70	74.000	ENSEBUG00000015029	eefsec	93	50.000	Eptatretus_burgeri
ENSAMXG00000002260	eefsec	97	62.542	ENSEASG00005006786	EEFSEC	99	62.876	Equus_asinus_asinus
ENSAMXG00000002260	eefsec	97	62.542	ENSECAG00000016565	EEFSEC	99	62.876	Equus_caballus
ENSAMXG00000002260	eefsec	100	71.429	ENSELUG00000016632	eefsec	100	71.769	Esox_lucius
ENSAMXG00000002260	eefsec	97	62.562	ENSFCAG00000006153	EEFSEC	99	62.729	Felis_catus
ENSAMXG00000002260	eefsec	82	65.784	ENSFALG00000007901	EEFSEC	99	66.057	Ficedula_albicollis
ENSAMXG00000002260	eefsec	82	61.446	ENSFDAG00000010243	EEFSEC	99	70.000	Fukomys_damarensis
ENSAMXG00000002260	eefsec	98	74.261	ENSFHEG00000007155	eefsec	99	74.261	Fundulus_heteroclitus
ENSAMXG00000002260	eefsec	99	70.415	ENSGMOG00000007705	eefsec	99	70.812	Gadus_morhua
ENSAMXG00000002260	eefsec	98	66.267	ENSGALG00000038684	EEFSEC	99	66.496	Gallus_gallus
ENSAMXG00000002260	eefsec	98	74.216	ENSGAFG00000021692	eefsec	99	74.564	Gambusia_affinis
ENSAMXG00000002260	eefsec	97	76.265	ENSGACG00000000793	eefsec	99	76.132	Gasterosteus_aculeatus
ENSAMXG00000002260	eefsec	100	64.500	ENSGAGG00000002059	EEFSEC	100	64.608	Gopherus_agassizii
ENSAMXG00000002260	eefsec	85	62.620	ENSGGOG00000001445	EEFSEC	98	62.620	Gorilla_gorilla
ENSAMXG00000002260	eefsec	98	75.000	ENSHBUG00000008917	eefsec	98	75.000	Haplochromis_burtoni
ENSAMXG00000002260	eefsec	97	63.328	ENSHGLG00000000094	EEFSEC	99	69.333	Heterocephalus_glaber_female
ENSAMXG00000002260	eefsec	97	63.140	ENSHGLG00100011393	EEFSEC	94	63.140	Heterocephalus_glaber_male
ENSAMXG00000002260	eefsec	97	72.251	ENSHCOG00000004193	eefsec	99	72.251	Hippocampus_comes
ENSAMXG00000002260	eefsec	100	86.667	ENSIPUG00000017291	eefsec	100	86.667	Ictalurus_punctatus
ENSAMXG00000002260	eefsec	82	59.596	ENSSTOG00000019802	EEFSEC	99	59.596	Ictidomys_tridecemlineatus
ENSAMXG00000002260	eefsec	98	74.216	ENSKMAG00000019907	eefsec	98	74.216	Kryptolebias_marmoratus
ENSAMXG00000002260	eefsec	98	76.562	ENSLBEG00000017908	eefsec	98	76.562	Labrus_bergylta
ENSAMXG00000002260	eefsec	84	68.924	ENSLACG00000013137	EEFSEC	95	68.327	Latimeria_chalumnae
ENSAMXG00000002260	eefsec	99	72.712	ENSLOCG00000014535	eefsec	99	72.603	Lepisosteus_oculatus
ENSAMXG00000002260	eefsec	97	60.951	ENSLAFG00000001997	EEFSEC	99	61.290	Loxodonta_africana
ENSAMXG00000002260	eefsec	97	62.437	ENSMFAG00000042128	EEFSEC	99	62.437	Macaca_fascicularis
ENSAMXG00000002260	eefsec	81	59.959	ENSMMUG00000018663	EEFSEC	99	59.959	Macaca_mulatta
ENSAMXG00000002260	eefsec	97	62.604	ENSMNEG00000028574	EEFSEC	99	62.604	Macaca_nemestrina
ENSAMXG00000002260	eefsec	83	60.040	ENSMLEG00000041771	EEFSEC	93	60.040	Mandrillus_leucophaeus
ENSAMXG00000002260	eefsec	97	75.261	ENSMAMG00000023964	eefsec	99	83.936	Mastacembelus_armatus
ENSAMXG00000002260	eefsec	63	83.267	ENSMZEG00005009380	eefsec	98	83.267	Maylandia_zebra
ENSAMXG00000002260	eefsec	65	63.706	ENSMGAG00000007243	EEFSEC	100	63.706	Meleagris_gallopavo
ENSAMXG00000002260	eefsec	87	66.098	ENSMAUG00000011197	Eefsec	92	71.371	Mesocricetus_auratus
ENSAMXG00000002260	eefsec	97	63.220	ENSMOCG00000017748	Eefsec	92	72.581	Microtus_ochrogaster
ENSAMXG00000002260	eefsec	62	83.665	ENSMMOG00000021820	eefsec	98	83.665	Mola_mola
ENSAMXG00000002260	eefsec	87	67.857	ENSMODG00000008034	EEFSEC	80	67.857	Monodelphis_domestica
ENSAMXG00000002260	eefsec	96	74.603	ENSMALG00000016211	eefsec	98	75.977	Monopterus_albus
ENSAMXG00000002260	eefsec	97	62.732	MGP_CAROLIEiJ_G0028627	Eefsec	99	68.874	Mus_caroli
ENSAMXG00000002260	eefsec	97	62.963	ENSMUSG00000033216	Eefsec	99	68.874	Mus_musculus
ENSAMXG00000002260	eefsec	97	62.626	MGP_PahariEiJ_G0022366	Eefsec	99	68.874	Mus_pahari
ENSAMXG00000002260	eefsec	97	62.963	MGP_SPRETEiJ_G0029640	Eefsec	99	68.874	Mus_spretus
ENSAMXG00000002260	eefsec	97	62.375	ENSMPUG00000017340	EEFSEC	95	62.542	Mustela_putorius_furo
ENSAMXG00000002260	eefsec	82	60.757	ENSMLUG00000004261	EEFSEC	99	60.757	Myotis_lucifugus
ENSAMXG00000002260	eefsec	98	74.828	ENSNBRG00000002387	eefsec	98	83.665	Neolamprologus_brichardi
ENSAMXG00000002260	eefsec	97	61.770	ENSNLEG00000014303	EEFSEC	99	62.437	Nomascus_leucogenys
ENSAMXG00000002260	eefsec	82	64.286	ENSMEUG00000005747	EEFSEC	99	64.286	Notamacropus_eugenii
ENSAMXG00000002260	eefsec	97	63.361	ENSOPRG00000011276	EEFSEC	99	63.361	Ochotona_princeps
ENSAMXG00000002260	eefsec	97	63.328	ENSODEG00000002928	EEFSEC	99	63.328	Octodon_degus
ENSAMXG00000002260	eefsec	81	72.141	ENSONIG00000019038	eefsec	100	72.141	Oreochromis_niloticus
ENSAMXG00000002260	eefsec	81	63.580	ENSOANG00000009108	EEFSEC	99	63.580	Ornithorhynchus_anatinus
ENSAMXG00000002260	eefsec	98	63.484	ENSOCUG00000016517	EEFSEC	99	63.484	Oryctolagus_cuniculus
ENSAMXG00000002260	eefsec	98	74.695	ENSORLG00000001377	eefsec	98	82.470	Oryzias_latipes
ENSAMXG00000002260	eefsec	98	74.346	ENSORLG00020000729	eefsec	98	82.470	Oryzias_latipes_hni
ENSAMXG00000002260	eefsec	98	74.695	ENSORLG00015001986	eefsec	98	74.695	Oryzias_latipes_hsok
ENSAMXG00000002260	eefsec	83	70.370	ENSOMEG00000010071	eefsec	89	69.342	Oryzias_melastigma
ENSAMXG00000002260	eefsec	73	63.801	ENSOGAG00000014084	EEFSEC	97	63.801	Otolemur_garnettii
ENSAMXG00000002260	eefsec	63	62.141	ENSOARG00000004600	EEFSEC	100	62.042	Ovis_aries
ENSAMXG00000002260	eefsec	97	62.270	ENSPPAG00000030936	EEFSEC	99	62.938	Pan_paniscus
ENSAMXG00000002260	eefsec	97	62.938	ENSPPRG00000002846	EEFSEC	99	62.938	Panthera_pardus
ENSAMXG00000002260	eefsec	84	60.465	ENSPTIG00000013855	EEFSEC	92	60.465	Panthera_tigris_altaica
ENSAMXG00000002260	eefsec	97	62.270	ENSPTRG00000015353	EEFSEC	99	62.938	Pan_troglodytes
ENSAMXG00000002260	eefsec	97	62.771	ENSPANG00000017041	EEFSEC	99	62.771	Papio_anubis
ENSAMXG00000002260	eefsec	99	73.595	ENSPKIG00000005220	eefsec	99	79.615	Paramormyrops_kingsleyae
ENSAMXG00000002260	eefsec	88	67.939	ENSPSIG00000015135	EEFSEC	97	67.557	Pelodiscus_sinensis
ENSAMXG00000002260	eefsec	98	76.481	ENSPMGG00000020300	eefsec	99	76.481	Periophthalmus_magnuspinnatus
ENSAMXG00000002260	eefsec	97	63.790	ENSPEMG00000013677	Eefsec	92	72.177	Peromyscus_maniculatus_bairdii
ENSAMXG00000002260	eefsec	88	66.160	ENSPMAG00000006779	eefsec	98	66.415	Petromyzon_marinus
ENSAMXG00000002260	eefsec	81	63.580	ENSPCIG00000020494	EEFSEC	99	63.580	Phascolarctos_cinereus
ENSAMXG00000002260	eefsec	98	73.519	ENSPFOG00000003748	eefsec	98	73.868	Poecilia_formosa
ENSAMXG00000002260	eefsec	99	72.978	ENSPLAG00000018012	eefsec	99	73.322	Poecilia_latipinna
ENSAMXG00000002260	eefsec	99	73.322	ENSPMEG00000001202	eefsec	99	73.666	Poecilia_mexicana
ENSAMXG00000002260	eefsec	98	73.868	ENSPREG00000012235	eefsec	99	73.868	Poecilia_reticulata
ENSAMXG00000002260	eefsec	97	62.104	ENSPPYG00000013436	EEFSEC	99	62.437	Pongo_abelii
ENSAMXG00000002260	eefsec	87	58.302	ENSPCAG00000005883	EEFSEC	99	58.302	Procavia_capensis
ENSAMXG00000002260	eefsec	97	60.943	ENSPCOG00000023432	EEFSEC	99	60.943	Propithecus_coquereli
ENSAMXG00000002260	eefsec	63	68.093	ENSPVAG00000007070	EEFSEC	64	68.093	Pteropus_vampyrus
ENSAMXG00000002260	eefsec	98	74.655	ENSPNYG00000005726	eefsec	98	83.267	Pundamilia_nyererei
ENSAMXG00000002260	eefsec	100	89.915	ENSPNAG00000016724	eefsec	100	89.915	Pygocentrus_nattereri
ENSAMXG00000002260	eefsec	97	63.069	ENSRNOG00000012954	Eefsec	98	71.774	Rattus_norvegicus
ENSAMXG00000002260	eefsec	97	61.937	ENSRBIG00000032635	EEFSEC	99	62.270	Rhinopithecus_bieti
ENSAMXG00000002260	eefsec	81	59.553	ENSSBOG00000031478	EEFSEC	99	59.553	Saimiri_boliviensis_boliviensis
ENSAMXG00000002260	eefsec	81	64.198	ENSSHAG00000014760	EEFSEC	99	64.198	Sarcophilus_harrisii
ENSAMXG00000002260	eefsec	97	72.881	ENSSFOG00015021109	eefsec	98	72.881	Scleropages_formosus
ENSAMXG00000002260	eefsec	98	74.479	ENSSMAG00000001454	eefsec	99	74.479	Scophthalmus_maximus
ENSAMXG00000002260	eefsec	98	75.694	ENSSDUG00000007924	eefsec	99	82.716	Seriola_dumerili
ENSAMXG00000002260	eefsec	96	75.177	ENSSLDG00000024985	eefsec	98	75.177	Seriola_lalandi_dorsalis
ENSAMXG00000002260	eefsec	52	71.111	ENSSARG00000003789	-	56	75.556	Sorex_araneus
ENSAMXG00000002260	eefsec	81	62.887	ENSSPUG00000004191	EEFSEC	100	63.505	Sphenodon_punctatus
ENSAMXG00000002260	eefsec	98	74.826	ENSSPAG00000001320	eefsec	99	82.470	Stegastes_partitus
ENSAMXG00000002260	eefsec	97	63.193	ENSSSCG00000011619	EEFSEC	98	69.721	Sus_scrofa
ENSAMXG00000002260	eefsec	98	66.267	ENSTGUG00000007895	EEFSEC	99	66.496	Taeniopygia_guttata
ENSAMXG00000002260	eefsec	97	74.783	ENSTRUG00000010327	eefsec	98	74.783	Takifugu_rubripes
ENSAMXG00000002260	eefsec	97	74.261	ENSTNIG00000003225	eefsec	99	74.261	Tetraodon_nigroviridis
ENSAMXG00000002260	eefsec	97	63.452	ENSTTRG00000000994	EEFSEC	99	63.452	Tursiops_truncatus
ENSAMXG00000002260	eefsec	97	63.940	ENSUAMG00000017283	EEFSEC	99	63.940	Ursus_americanus
ENSAMXG00000002260	eefsec	72	63.991	ENSVVUG00000018372	EEFSEC	90	63.991	Vulpes_vulpes
ENSAMXG00000002260	eefsec	78	65.957	ENSXETG00000002066	eefsec	98	65.957	Xenopus_tropicalis
ENSAMXG00000002260	eefsec	98	74.042	ENSXCOG00000019916	eefsec	99	74.739	Xiphophorus_couchianus
ENSAMXG00000002260	eefsec	98	74.042	ENSXMAG00000001839	eefsec	99	74.739	Xiphophorus_maculatus