EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000002273 (Gene tree)
Gene ID
103043848
Gene Symbol
patz1
Alias
-
Full Name
POZ/BTB and AT hook containing zinc finger 1
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Minus strand
Length
10130 bases
Position
chr13:35662973-35673102
Accession
103043848
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000002324zf-C2H2PF00096.267.2e-3015
ENSAMXP00000002324zf-C2H2PF00096.267.2e-3025
ENSAMXP00000002324zf-C2H2PF00096.267.2e-3035
ENSAMXP00000002324zf-C2H2PF00096.267.2e-3045
ENSAMXP00000002324zf-C2H2PF00096.267.2e-3055
ENSAMXP00000043728zf-C2H2PF00096.264.8e-2314
ENSAMXP00000043728zf-C2H2PF00096.264.8e-2324
ENSAMXP00000043728zf-C2H2PF00096.264.8e-2334
ENSAMXP00000043728zf-C2H2PF00096.264.8e-2344
ENSAMXP00000002324zf-metPF12874.72.2e-1112
ENSAMXP00000002324zf-metPF12874.72.2e-1122
ENSAMXP00000043728zf-metPF12874.71e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000039912-3731XM_007254331ENSAMXP00000043728678 (aa)XP_007254393UPI000BBDA195
ENSAMXT00000002324-2136XM_007254330ENSAMXP00000002324711 (aa)XP_007254392W5K413
Gene Model
Click here to download ENSAMXG00000002273's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000002273's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000002273patz15531.429ENSAMXG00000041975-8045.098
ENSAMXG00000002273patz15731.365ENSAMXG00000034847-9233.906
ENSAMXG00000002273patz15731.602ENSAMXG00000039004-8537.805
ENSAMXG00000002273patz15731.496ENSAMXG00000038453-8136.025
ENSAMXG00000002273patz16233.514ENSAMXG00000043978-8833.514
ENSAMXG00000002273patz15432.794ENSAMXG00000038280-8834.400
ENSAMXG00000002273patz15437.956ENSAMXG00000041650-8441.346
ENSAMXG00000002273patz15240.594ENSAMXG00000037143-9337.795
ENSAMXG00000002273patz15530.370ENSAMXG00000031501-8733.475
ENSAMXG00000002273patz15134.228ENSAMXG00000033013-8034.337
ENSAMXG00000002273patz15530.102ENSAMXG00000025455-9635.948
ENSAMXG00000002273patz15037.748ENSAMXG00000019489-8237.748
ENSAMXG00000002273patz15333.200ENSAMXG00000010805-9242.222
ENSAMXG00000002273patz15136.145ENSAMXG00000044028-9836.145
ENSAMXG00000002273patz15431.600ENSAMXG00000039016-8334.197
ENSAMXG00000002273patz15036.527ENSAMXG00000035286si:ch1073-224n8.17631.159
ENSAMXG00000002273patz15632.130ENSAMXG00000040212-8432.130
ENSAMXG00000002273patz15140.000ENSAMXG00000038536-8834.783
ENSAMXG00000002273patz15235.333ENSAMXG00000036257-8734.483
ENSAMXG00000002273patz15531.086ENSAMXG00000043423-7434.266
ENSAMXG00000002273patz15231.835ENSAMXG00000030659-8142.336
ENSAMXG00000002273patz15630.000ENSAMXG00000039408-9335.429
ENSAMXG00000002273patz15533.333ENSAMXG00000031496-8736.170
ENSAMXG00000002273patz15431.120ENSAMXG00000032237-9134.513
ENSAMXG00000002273patz15535.570ENSAMXG00000039770-7839.759
ENSAMXG00000002273patz15230.357ENSAMXG00000034857-6533.529
ENSAMXG00000002273patz15130.364ENSAMXG00000029828-9432.174
ENSAMXG00000002273patz15632.927ENSAMXG00000012873-8840.678
ENSAMXG00000002273patz15035.928ENSAMXG00000039622zbtb415135.928
ENSAMXG00000002273patz15532.130ENSAMXG00000025452-9234.965
ENSAMXG00000002273patz15233.333ENSAMXG00000032619-9533.333
ENSAMXG00000002273patz15631.343ENSAMXG00000037885-9635.976
ENSAMXG00000002273patz16630.903ENSAMXG00000013492-9536.782
ENSAMXG00000002273patz15532.934ENSAMXG00000041861-8236.145
ENSAMXG00000002273patz16730.556ENSAMXG00000037717-9935.542
ENSAMXG00000002273patz15530.396ENSAMXG00000039182-6730.688
ENSAMXG00000002273patz15631.020ENSAMXG00000038636-9735.556
ENSAMXG00000002273patz17035.294ENSAMXG00000005918zbtb16a5535.542
ENSAMXG00000002273patz15131.048ENSAMXG00000036241-8635.294
ENSAMXG00000002273patz15839.597ENSAMXG00000038905-8939.597
ENSAMXG00000002273patz15531.034ENSAMXG00000029783-8535.673
ENSAMXG00000002273patz17937.584ENSAMXG00000043418zbtb247232.692
ENSAMXG00000002273patz15337.255ENSAMXG00000044034-6137.255
ENSAMXG00000002273patz15642.308ENSAMXG00000041609-9236.747
ENSAMXG00000002273patz15530.516ENSAMXG00000033500-9133.333
ENSAMXG00000002273patz15137.500ENSAMXG00000034096-8737.500
ENSAMXG00000002273patz15136.095ENSAMXG00000004610-9638.000
ENSAMXG00000002273patz15542.308ENSAMXG00000036633-6431.602
ENSAMXG00000002273patz15733.577ENSAMXG00000024907znf319b8137.273
ENSAMXG00000002273patz15531.673ENSAMXG00000044110-8734.637
ENSAMXG00000002273patz15333.125ENSAMXG00000012589-8533.125
ENSAMXG00000002273patz15632.491ENSAMXG00000029178-9638.053
ENSAMXG00000002273patz15830.657ENSAMXG00000011804-9236.025
ENSAMXG00000002273patz15530.515ENSAMXG00000042938-8335.366
ENSAMXG00000002273patz15534.756ENSAMXG00000040630-9836.364
ENSAMXG00000002273patz16037.059ENSAMXG00000034402-9037.059
ENSAMXG00000002273patz15530.147ENSAMXG00000043251-9537.349
ENSAMXG00000002273patz15430.357ENSAMXG00000018161-9533.790
ENSAMXG00000002273patz15740.146ENSAMXG00000014745-8041.228
ENSAMXG00000002273patz15138.235ENSAMXG00000034333-8044.068
ENSAMXG00000002273patz19230.396ENSAMXG00000033405zbtb149140.580
ENSAMXG00000002273patz15633.529ENSAMXG00000009872zbtb16b5533.775
ENSAMXG00000002273patz15334.437ENSAMXG00000033299-6834.965
ENSAMXG00000002273patz15649.020ENSAMXG00000035437-9749.020
ENSAMXG00000002273patz15030.738ENSAMXG00000035145-6837.349
ENSAMXG00000002273patz15730.841ENSAMXG00000039432-8837.692
ENSAMXG00000002273patz15732.576ENSAMXG00000030742-9738.462
ENSAMXG00000002273patz15630.830ENSAMXG00000042275-9233.333
ENSAMXG00000002273patz15931.982ENSAMXG00000031844-9133.566
ENSAMXG00000002273patz15931.488ENSAMXG00000009558-9340.909
ENSAMXG00000002273patz15530.769ENSAMXG00000031794-9339.259
ENSAMXG00000002273patz15334.969ENSAMXG00000013274-9035.593
ENSAMXG00000002273patz15331.837ENSAMXG00000001626-9135.849
ENSAMXG00000002273patz15630.332ENSAMXG00000031489-9236.250
ENSAMXG00000002273patz15542.268ENSAMXG00000039977-9636.364
ENSAMXG00000002273patz15231.076ENSAMXG00000029109-8535.374
ENSAMXG00000002273patz15130.677ENSAMXG00000031900-8933.508
ENSAMXG00000002273patz15131.020ENSAMXG00000042633-9231.780
ENSAMXG00000002273patz15138.596ENSAMXG00000034344-7733.962
ENSAMXG00000002273patz15532.099ENSAMXG00000036762-9736.025
ENSAMXG00000002273patz15332.218ENSAMXG00000026143-9433.191
ENSAMXG00000002273patz16136.145ENSAMXG00000026142-8936.145
ENSAMXG00000002273patz15530.108ENSAMXG00000041404-9636.025
ENSAMXG00000002273patz15531.308ENSAMXG00000031009-8137.037
ENSAMXG00000002273patz15537.226ENSAMXG00000036849-7637.226
ENSAMXG00000002273patz15140.268ENSAMXG00000042746-8837.500
ENSAMXG00000002273patz15532.800ENSAMXG00000042593-9134.615
ENSAMXG00000002273patz15038.194ENSAMXG00000033252-8334.409
ENSAMXG00000002273patz15338.211ENSAMXG00000030911-6836.054
ENSAMXG00000002273patz16133.624ENSAMXG00000042174-8935.507
ENSAMXG00000002273patz15037.895ENSAMXG00000043291-6037.895
ENSAMXG00000002273patz15831.646ENSAMXG00000033201-8932.231
ENSAMXG00000002273patz16237.267ENSAMXG00000035809-9942.708
ENSAMXG00000002273patz15530.568ENSAMXG00000036233-7737.349
ENSAMXG00000002273patz16230.435ENSAMXG00000005882znf1315634.862
ENSAMXG00000002273patz15136.242ENSAMXG00000031646-9730.544
ENSAMXG00000002273patz16531.395ENSAMXG00000036915-9641.441
ENSAMXG00000002273patz15530.342ENSAMXG00000041865-9839.759
ENSAMXG00000002273patz15436.686ENSAMXG00000041864prdm58532.669
ENSAMXG00000002273patz15130.688ENSAMXG00000041862-9533.125
ENSAMXG00000002273patz15530.303ENSAMXG00000032457-9134.483
ENSAMXG00000002273patz15634.899ENSAMXG00000032212-8533.702
ENSAMXG00000002273patz15831.835ENSAMXG00000010930-8633.600
ENSAMXG00000002273patz15531.148ENSAMXG00000030530-9334.091
ENSAMXG00000002273patz16230.502ENSAMXG00000037703-8736.842
ENSAMXG00000002273patz15735.246ENSAMXG00000037709-9436.111
ENSAMXG00000002273patz15540.708ENSAMXG00000039752-8840.708
ENSAMXG00000002273patz15531.338ENSAMXG00000041128-8836.145
ENSAMXG00000002273patz15132.500ENSAMXG00000024918hic25141.489
ENSAMXG00000002273patz15230.797ENSAMXG00000017959-9433.333
ENSAMXG00000002273patz15333.871ENSAMXG00000035127-9035.088
ENSAMXG00000002273patz16333.061ENSAMXG00000009776-8942.308
ENSAMXG00000002273patz16233.704ENSAMXG00000007973-8938.624
ENSAMXG00000002273patz15531.560ENSAMXG00000041725-8837.267
ENSAMXG00000002273patz15331.489ENSAMXG00000035690-7734.222
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000002273patz19862.147ENSG00000100105PATZ19762.524Homo_sapiens
ENSAMXG00000002273patz110066.879ENSAPOG00000018447patz110067.864Acanthochromis_polyacanthus
ENSAMXG00000002273patz19862.218ENSAMEG00000007074PATZ19762.524Ailuropoda_melanoleuca
ENSAMXG00000002273patz110069.501ENSACIG00000016779patz19989.116Amphilophus_citrinellus
ENSAMXG00000002273patz110064.017ENSAPEG00000013354patz110066.866Amphiprion_percula
ENSAMXG00000002273patz110069.588ENSATEG00000011260patz110069.323Anabas_testudineus
ENSAMXG00000002273patz18751.938ENSAPLG00000003934PATZ19661.449Anas_platyrhynchos
ENSAMXG00000002273patz19862.147ENSANAG00000029603PATZ19762.524Aotus_nancymaae
ENSAMXG00000002273patz19862.147ENSBTAG00000005478PATZ19762.524Bos_taurus
ENSAMXG00000002273patz19862.147ENSCJAG00000010978PATZ19762.524Callithrix_jacchus
ENSAMXG00000002273patz19862.147ENSCAFG00000013087PATZ19762.524Canis_familiaris
ENSAMXG00000002273patz19862.335ENSCHIG00000020203PATZ19762.335Capra_hircus
ENSAMXG00000002273patz19862.147ENSTSYG00000033183PATZ19762.524Carlito_syrichta
ENSAMXG00000002273patz19862.147ENSCCAG00000028772PATZ19762.524Cebus_capucinus
ENSAMXG00000002273patz19862.218ENSCATG00000006101PATZ19762.524Cercocebus_atys
ENSAMXG00000002273patz19961.142ENSCPBG00000011277PATZ19961.255Chrysemys_picta_bellii
ENSAMXG00000002273patz19862.218ENSCANG00000024972PATZ19762.524Colobus_angolensis_palliatus
ENSAMXG00000002273patz19858.887ENSCGRG00001004071Patz19760.202Cricetulus_griseus_chok1gshd
ENSAMXG00000002273patz19358.634ENSCGRG00000004814Patz19960.000Cricetulus_griseus_crigri
ENSAMXG00000002273patz110056.723ENSCSEG00000001385patz19863.799Cynoglossus_semilaevis
ENSAMXG00000002273patz110063.584ENSCVAG00000007684patz110068.623Cyprinodon_variegatus
ENSAMXG00000002273patz110077.922ENSDARG00000076584patz110077.922Danio_rerio
ENSAMXG00000002273patz18962.147ENSDNOG00000003183PATZ19662.218Dasypus_novemcinctus
ENSAMXG00000002273patz19862.335ENSDORG00000023834Patz19762.712Dipodomys_ordii
ENSAMXG00000002273patz19862.147ENSECAG00000025030PATZ19762.524Equus_caballus
ENSAMXG00000002273patz110067.225ENSELUG00000002333patz110069.539Esox_lucius
ENSAMXG00000002273patz19862.147ENSFCAG00000030253PATZ19762.524Felis_catus
ENSAMXG00000002273patz18852.227ENSFALG00000007450PATZ19762.212Ficedula_albicollis
ENSAMXG00000002273patz19658.189ENSFDAG00000005614PATZ19857.996Fukomys_damarensis
ENSAMXG00000002273patz110064.511ENSFHEG00000014755patz110066.667Fundulus_heteroclitus
ENSAMXG00000002273patz19165.138ENSGMOG00000001062patz19956.630Gadus_morhua
ENSAMXG00000002273patz19951.974ENSGALG00000006934PATZ19960.668Gallus_gallus
ENSAMXG00000002273patz110063.588ENSGAFG00000010053patz19186.395Gambusia_affinis
ENSAMXG00000002273patz18753.981ENSGAGG00000003214PATZ19962.156Gopherus_agassizii
ENSAMXG00000002273patz19862.147ENSGGOG00000017171PATZ19762.524Gorilla_gorilla
ENSAMXG00000002273patz19965.430ENSHCOG00000017644patz19964.768Hippocampus_comes
ENSAMXG00000002273patz110085.526ENSIPUG00000017653patz19977.992Ictalurus_punctatus
ENSAMXG00000002273patz19862.335ENSSTOG00000020707PATZ19762.712Ictidomys_tridecemlineatus
ENSAMXG00000002273patz19860.252ENSJJAG00000015259Patz19760.956Jaculus_jaculus
ENSAMXG00000002273patz18469.145ENSKMAG00000008157patz19969.703Kryptolebias_marmoratus
ENSAMXG00000002273patz19863.584ENSLAFG00000002317PATZ19763.584Loxodonta_africana
ENSAMXG00000002273patz19862.335ENSMFAG00000040968PATZ19762.524Macaca_fascicularis
ENSAMXG00000002273patz19862.335ENSMNEG00000037588PATZ19762.524Macaca_nemestrina
ENSAMXG00000002273patz19862.218ENSMLEG00000030938PATZ19762.524Mandrillus_leucophaeus
ENSAMXG00000002273patz110064.121ENSMAMG00000023652patz110066.467Mastacembelus_armatus
ENSAMXG00000002273patz18849.381ENSMGAG00000008439PATZ19957.809Meleagris_gallopavo
ENSAMXG00000002273patz19860.503ENSMAUG00000004129Patz19762.020Mesocricetus_auratus
ENSAMXG00000002273patz19862.147ENSMICG00000005430PATZ19762.524Microcebus_murinus
ENSAMXG00000002273patz19860.682ENSMOCG00000014488Patz19762.222Microtus_ochrogaster
ENSAMXG00000002273patz110064.286ENSMMOG00000021679patz110064.151Mola_mola
ENSAMXG00000002273patz110063.649ENSMALG00000021172patz19189.796Monopterus_albus
ENSAMXG00000002273patz19860.862MGP_CAROLIEiJ_G0016007Patz19762.424Mus_caroli
ENSAMXG00000002273patz19860.862ENSMUSG00000020453Patz19762.424Mus_musculus
ENSAMXG00000002273patz19860.862MGP_PahariEiJ_G0016884Patz19762.424Mus_pahari
ENSAMXG00000002273patz19860.862MGP_SPRETEiJ_G0016846Patz19762.424Mus_spretus
ENSAMXG00000002273patz19862.218ENSMLUG00000009942PATZ19762.524Myotis_lucifugus
ENSAMXG00000002273patz19860.682ENSNGAG00000010268Patz19762.222Nannospalax_galili
ENSAMXG00000002273patz110069.366ENSNBRG00000016032patz19989.116Neolamprologus_brichardi
ENSAMXG00000002273patz16366.775ENSMEUG00000016293PATZ19366.775Notamacropus_eugenii
ENSAMXG00000002273patz19862.147ENSODEG00000003589PATZ19762.147Octodon_degus
ENSAMXG00000002273patz110065.616ENSONIG00000004248patz110068.127Oreochromis_niloticus
ENSAMXG00000002273patz19860.474ENSOANG00000014654PATZ19760.656Ornithorhynchus_anatinus
ENSAMXG00000002273patz110063.728ENSORLG00020010937patz19969.405Oryzias_latipes_hni
ENSAMXG00000002273patz110063.545ENSORLG00015007396patz110067.671Oryzias_latipes_hsok
ENSAMXG00000002273patz110068.587ENSOMEG00000006636patz110068.638Oryzias_melastigma
ENSAMXG00000002273patz19862.147ENSOGAG00000027905PATZ19762.524Otolemur_garnettii
ENSAMXG00000002273patz19862.147ENSPPAG00000033227PATZ19762.524Pan_paniscus
ENSAMXG00000002273patz19862.147ENSPPRG00000001573PATZ19762.524Panthera_pardus
ENSAMXG00000002273patz18862.613ENSPTIG00000007937PATZ19062.222Panthera_tigris_altaica
ENSAMXG00000002273patz19862.147ENSPTRG00000014268PATZ19762.524Pan_troglodytes
ENSAMXG00000002273patz19862.218ENSPANG00000006821PATZ19762.524Papio_anubis
ENSAMXG00000002273patz110066.058ENSPKIG00000019584patz110066.925Paramormyrops_kingsleyae
ENSAMXG00000002273patz16053.253ENSPSIG00000016553-8660.630Pelodiscus_sinensis
ENSAMXG00000002273patz17275.732ENSPSIG00000011562-9876.303Pelodiscus_sinensis
ENSAMXG00000002273patz110059.327ENSPMGG00000010196patz19967.647Periophthalmus_magnuspinnatus
ENSAMXG00000002273patz19860.682ENSPEMG00000005321Patz19762.424Peromyscus_maniculatus_bairdii
ENSAMXG00000002273patz110063.165ENSPLAG00000010425patz110067.066Poecilia_latipinna
ENSAMXG00000002273patz110063.612ENSPMEG00000000255patz19887.075Poecilia_mexicana
ENSAMXG00000002273patz110059.618ENSPREG00000002440patz110059.754Poecilia_reticulata
ENSAMXG00000002273patz19862.147ENSPPYG00000011732PATZ19762.524Pongo_abelii
ENSAMXG00000002273patz19862.147ENSPCOG00000019729PATZ19762.524Propithecus_coquereli
ENSAMXG00000002273patz19862.147ENSPVAG00000001749PATZ19762.524Pteropus_vampyrus
ENSAMXG00000002273patz110065.661ENSPNYG00000013542patz110068.400Pundamilia_nyererei
ENSAMXG00000002273patz18874.343ENSPNAG00000017222patz110073.570Pygocentrus_nattereri
ENSAMXG00000002273patz19862.218ENSRBIG00000044231PATZ19762.524Rhinopithecus_bieti
ENSAMXG00000002273patz19862.218ENSRROG00000037155PATZ19762.524Rhinopithecus_roxellana
ENSAMXG00000002273patz19862.147ENSSBOG00000003894PATZ19762.524Saimiri_boliviensis_boliviensis
ENSAMXG00000002273patz18097.436ENSSFOG00015013244patz17897.436Scleropages_formosus
ENSAMXG00000002273patz19861.321ENSSPUG00000015298PATZ19661.321Sphenodon_punctatus
ENSAMXG00000002273patz18862.500ENSSSCG00000010027PATZ19962.500Sus_scrofa
ENSAMXG00000002273patz110063.919ENSTRUG00000015366patz19687.755Takifugu_rubripes
ENSAMXG00000002273patz19861.959ENSTTRG00000010279PATZ19762.335Tursiops_truncatus
ENSAMXG00000002273patz19856.472ENSUAMG00000015014PATZ19762.222Ursus_americanus
ENSAMXG00000002273patz19862.397ENSXETG00000004190patz19850.970Xenopus_tropicalis
ENSAMXG00000002273patz110064.286ENSXMAG00000015531patz19887.755Xiphophorus_maculatus

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