EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000002342 (Gene tree)
Gene ID: 103031671
Gene Symbol: atxn2
Alias: si:dkey-165i4.1
Full Name: ataxin 2
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 35191 bases
Position: chrAPWO02001298.1:96214-131404
Accession: 103031671
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000002416	PAM2	PF07145.15	7.5e-06	1	1
ENSAMXP00000045227	PAM2	PF07145.15	7.9e-06	1	1
ENSAMXP00000030981	PAM2	PF07145.15	8e-06	1	1
ENSAMXP00000042193	PAM2	PF07145.15	8.1e-06	1	1
ENSAMXP00000029938	PAM2	PF07145.15	8.2e-06	1	1
ENSAMXP00000002416	LsmAD	PF06741.13	1.1e-16	1	1
ENSAMXP00000045227	LsmAD	PF06741.13	1.1e-16	1	1
ENSAMXP00000030981	LsmAD	PF06741.13	1.1e-16	1	1
ENSAMXP00000029938	LsmAD	PF06741.13	1.2e-16	1	1
ENSAMXP00000042193	LsmAD	PF06741.13	1.4e-16	1	1
ENSAMXP00000045227	SM-ATX	PF14438.6	1.7e-19	1	1
ENSAMXP00000042193	SM-ATX	PF14438.6	1.7e-19	1	1
ENSAMXP00000030981	SM-ATX	PF14438.6	1.7e-19	1	1
ENSAMXP00000029938	SM-ATX	PF14438.6	1.8e-19	1	1
ENSAMXP00000002416	SM-ATX	PF14438.6	2.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000002416	-	3880	XM_007237958	ENSAMXP00000002416	1017 (aa)	XP_007238020	W5K4A5
ENSAMXT00000042416	-	5105	-	ENSAMXP00000042193	1055 (aa)	-	-
ENSAMXT00000040155	-	4039	XM_022662655	ENSAMXP00000030981	1070 (aa)	XP_022518376	-
ENSAMXT00000046441	-	5081	XM_007237956	ENSAMXP00000045227	1047 (aa)	XP_007238018	-
ENSAMXT00000032381	-	5213	-	ENSAMXP00000029938	1091 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000002342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000002342's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000002342	atxn2	97	34.051	ENSAMXG00000020362	-	64	49.684

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000002342	atxn2	95	71.930	ENSG00000204842	ATXN2	90	75.758	Homo_sapiens
ENSAMXG00000002342	atxn2	99	73.448	ENSAPOG00000014663	atxn2	99	75.309	Acanthochromis_polyacanthus
ENSAMXG00000002342	atxn2	97	70.261	ENSAMEG00000013747	ATXN2	93	69.872	Ailuropoda_melanoleuca
ENSAMXG00000002342	atxn2	99	73.257	ENSAOCG00000001107	atxn2	99	75.119	Amphiprion_ocellaris
ENSAMXG00000002342	atxn2	99	73.238	ENSAPEG00000020250	atxn2	99	75.024	Amphiprion_percula
ENSAMXG00000002342	atxn2	89	69.775	ENSAPLG00000008724	ATXN2	93	70.607	Anas_platyrhynchos
ENSAMXG00000002342	atxn2	97	69.707	ENSACAG00000002419	ATXN2	94	69.329	Anolis_carolinensis
ENSAMXG00000002342	atxn2	97	70.000	ENSANAG00000022522	ATXN2	94	71.134	Aotus_nancymaae
ENSAMXG00000002342	atxn2	61	60.894	ENSACLG00000013359	atxn2	91	80.351	Astatotilapia_calliptera
ENSAMXG00000002342	atxn2	95	71.228	ENSBTAG00000022069	ATXN2	93	70.790	Bos_taurus
ENSAMXG00000002342	atxn2	97	70.159	ENSCJAG00000011756	ATXN2	94	64.948	Callithrix_jacchus
ENSAMXG00000002342	atxn2	96	69.967	ENSCAFG00000008606	ATXN2	77	69.811	Canis_familiaris
ENSAMXG00000002342	atxn2	95	71.579	ENSCAFG00020017041	ATXN2	93	71.134	Canis_lupus_dingo
ENSAMXG00000002342	atxn2	97	67.508	ENSCHIG00000012141	ATXN2	76	70.333	Capra_hircus
ENSAMXG00000002342	atxn2	97	69.935	ENSTSYG00000002717	ATXN2	94	70.790	Carlito_syrichta
ENSAMXG00000002342	atxn2	72	79.130	ENSCAPG00000013332	ATXN2	82	79.130	Cavia_aperea
ENSAMXG00000002342	atxn2	89	68.489	ENSCPOG00000001390	ATXN2	78	69.279	Cavia_porcellus
ENSAMXG00000002342	atxn2	97	70.607	ENSCCAG00000026267	ATXN2	94	71.478	Cebus_capucinus
ENSAMXG00000002342	atxn2	96	70.066	ENSCATG00000017877	ATXN2	94	64.948	Cercocebus_atys
ENSAMXG00000002342	atxn2	97	70.033	ENSCLAG00000009324	ATXN2	93	69.649	Chinchilla_lanigera
ENSAMXG00000002342	atxn2	96	70.395	ENSCSAG00000002590	ATXN2	88	70.219	Chlorocebus_sabaeus
ENSAMXG00000002342	atxn2	74	64.455	ENSCHOG00000004284	ATXN2	77	64.455	Choloepus_hoffmanni
ENSAMXG00000002342	atxn2	95	60.335	ENSCPBG00000003465	ATXN2	99	60.456	Chrysemys_picta_bellii
ENSAMXG00000002342	atxn2	97	70.915	ENSCANG00000042302	ATXN2	94	71.821	Colobus_angolensis_palliatus
ENSAMXG00000002342	atxn2	96	61.513	ENSCGRG00001022603	Atxn2	79	60.802	Cricetulus_griseus_chok1gshd
ENSAMXG00000002342	atxn2	97	69.032	ENSCGRG00000015823	Atxn2	92	68.671	Cricetulus_griseus_crigri
ENSAMXG00000002342	atxn2	100	69.325	ENSCSEG00000018366	atxn2	99	69.602	Cynoglossus_semilaevis
ENSAMXG00000002342	atxn2	100	67.757	ENSCSEG00000009072	-	99	68.446	Cynoglossus_semilaevis
ENSAMXG00000002342	atxn2	95	75.779	ENSCVAG00000020160	atxn2	99	69.972	Cyprinodon_variegatus
ENSAMXG00000002342	atxn2	89	84.839	ENSDARG00000052897	atxn2	93	85.294	Danio_rerio
ENSAMXG00000002342	atxn2	96	68.750	ENSDNOG00000015696	ATXN2	93	71.154	Dasypus_novemcinctus
ENSAMXG00000002342	atxn2	96	60.328	ENSDORG00000000808	Atxn2	93	60.129	Dipodomys_ordii
ENSAMXG00000002342	atxn2	83	59.295	ENSETEG00000005224	ATXN2	71	60.261	Echinops_telfairi
ENSAMXG00000002342	atxn2	97	70.358	ENSEASG00005012077	ATXN2	93	71.134	Equus_asinus_asinus
ENSAMXG00000002342	atxn2	97	70.455	ENSECAG00000014347	ATXN2	75	69.906	Equus_caballus
ENSAMXG00000002342	atxn2	74	68.301	ENSEEUG00000014635	-	70	68.301	Erinaceus_europaeus
ENSAMXG00000002342	atxn2	99	68.714	ENSELUG00000019632	atxn2	94	76.385	Esox_lucius
ENSAMXG00000002342	atxn2	96	69.967	ENSFCAG00000003178	ATXN2	89	69.659	Felis_catus
ENSAMXG00000002342	atxn2	97	70.588	ENSFDAG00000020942	ATXN2	94	70.192	Fukomys_damarensis
ENSAMXG00000002342	atxn2	91	71.696	ENSFHEG00000019561	atxn2	98	71.800	Fundulus_heteroclitus
ENSAMXG00000002342	atxn2	81	81.293	ENSGMOG00000007412	atxn2	85	81.356	Gadus_morhua
ENSAMXG00000002342	atxn2	87	70.000	ENSGALG00000004625	ATXN2	92	70.144	Gallus_gallus
ENSAMXG00000002342	atxn2	94	82.007	ENSGAFG00000003302	atxn2	99	71.633	Gambusia_affinis
ENSAMXG00000002342	atxn2	88	81.633	ENSGACG00000006295	atxn2	92	81.633	Gasterosteus_aculeatus
ENSAMXG00000002342	atxn2	95	61.222	ENSGAGG00000005014	ATXN2	99	61.648	Gopherus_agassizii
ENSAMXG00000002342	atxn2	95	71.930	ENSGGOG00000002137	ATXN2	93	71.478	Gorilla_gorilla
ENSAMXG00000002342	atxn2	99	71.947	ENSHBUG00000002921	atxn2	99	73.106	Haplochromis_burtoni
ENSAMXG00000002342	atxn2	97	70.915	ENSHGLG00100019351	ATXN2	94	70.513	Heterocephalus_glaber_male
ENSAMXG00000002342	atxn2	99	70.162	ENSHCOG00000005278	atxn2	96	71.347	Hippocampus_comes
ENSAMXG00000002342	atxn2	100	76.482	ENSIPUG00000016649	atxn2	99	77.575	Ictalurus_punctatus
ENSAMXG00000002342	atxn2	97	69.935	ENSSTOG00000000978	ATXN2	90	70.046	Ictidomys_tridecemlineatus
ENSAMXG00000002342	atxn2	100	72.023	ENSKMAG00000000980	atxn2	99	72.891	Kryptolebias_marmoratus
ENSAMXG00000002342	atxn2	59	64.658	ENSLBEG00000017484	atxn2	99	63.975	Labrus_bergylta
ENSAMXG00000002342	atxn2	97	71.987	ENSLACG00000012531	ATXN2	94	70.739	Latimeria_chalumnae
ENSAMXG00000002342	atxn2	99	77.745	ENSLOCG00000007880	atxn2	99	71.592	Lepisosteus_oculatus
ENSAMXG00000002342	atxn2	97	70.033	ENSLAFG00000007416	ATXN2	93	70.033	Loxodonta_africana
ENSAMXG00000002342	atxn2	95	71.579	ENSMFAG00000000374	ATXN2	93	71.134	Macaca_fascicularis
ENSAMXG00000002342	atxn2	95	71.579	ENSMMUG00000002226	ATXN2	94	71.284	Macaca_mulatta
ENSAMXG00000002342	atxn2	95	71.579	ENSMNEG00000035588	ATXN2	93	71.134	Macaca_nemestrina
ENSAMXG00000002342	atxn2	97	70.261	ENSMLEG00000024324	ATXN2	93	71.134	Mandrillus_leucophaeus
ENSAMXG00000002342	atxn2	99	71.702	ENSMAMG00000019160	atxn2	99	71.887	Mastacembelus_armatus
ENSAMXG00000002342	atxn2	99	71.851	ENSMZEG00005008476	atxn2	99	73.106	Maylandia_zebra
ENSAMXG00000002342	atxn2	89	69.132	ENSMGAG00000005288	ATXN2	94	68.770	Meleagris_gallopavo
ENSAMXG00000002342	atxn2	66	57.225	ENSMAUG00000008223	-	99	55.912	Mesocricetus_auratus
ENSAMXG00000002342	atxn2	95	71.579	ENSMICG00000013541	ATXN2	93	71.134	Microcebus_murinus
ENSAMXG00000002342	atxn2	81	71.090	ENSMOCG00000005219	Atxn2	90	70.507	Microtus_ochrogaster
ENSAMXG00000002342	atxn2	93	82.143	ENSMMOG00000013189	atxn2	92	82.143	Mola_mola
ENSAMXG00000002342	atxn2	98	66.254	ENSMODG00000012221	ATXN2	79	67.412	Monodelphis_domestica
ENSAMXG00000002342	atxn2	99	71.058	ENSMALG00000018529	atxn2	99	72.271	Monopterus_albus
ENSAMXG00000002342	atxn2	96	69.408	MGP_CAROLIEiJ_G0027692	Atxn2	89	69.279	Mus_caroli
ENSAMXG00000002342	atxn2	89	68.285	ENSMUSG00000042605	Atxn2	90	68.468	Mus_musculus
ENSAMXG00000002342	atxn2	66	57.370	MGP_PahariEiJ_G0024272	Atxn2	99	55.036	Mus_pahari
ENSAMXG00000002342	atxn2	89	68.285	MGP_SPRETEiJ_G0028690	Atxn2	90	68.468	Mus_spretus
ENSAMXG00000002342	atxn2	97	64.379	ENSMPUG00000002212	ATXN2	93	64.103	Mustela_putorius_furo
ENSAMXG00000002342	atxn2	97	71.197	ENSMLUG00000015559	ATXN2	93	70.794	Myotis_lucifugus
ENSAMXG00000002342	atxn2	95	71.930	ENSNLEG00000000484	ATXN2	93	71.478	Nomascus_leucogenys
ENSAMXG00000002342	atxn2	82	72.152	ENSMEUG00000012244	-	72	71.341	Notamacropus_eugenii
ENSAMXG00000002342	atxn2	95	61.565	ENSOPRG00000014599	ATXN2	94	61.333	Ochotona_princeps
ENSAMXG00000002342	atxn2	95	70.877	ENSODEG00000010798	ATXN2	94	70.447	Octodon_degus
ENSAMXG00000002342	atxn2	82	75.316	ENSOANG00000004796	ATXN2	93	74.390	Ornithorhynchus_anatinus
ENSAMXG00000002342	atxn2	97	68.690	ENSOCUG00000002855	ATXN2	66	68.339	Oryctolagus_cuniculus
ENSAMXG00000002342	atxn2	90	78.041	ENSORLG00000003606	atxn2	99	70.737	Oryzias_latipes
ENSAMXG00000002342	atxn2	99	68.966	ENSORLG00020000785	atxn2	99	69.466	Oryzias_latipes_hni
ENSAMXG00000002342	atxn2	99	68.929	ENSORLG00015012345	atxn2	99	69.743	Oryzias_latipes_hsok
ENSAMXG00000002342	atxn2	99	70.374	ENSOMEG00000020080	atxn2	99	70.746	Oryzias_melastigma
ENSAMXG00000002342	atxn2	96	69.408	ENSOGAG00000000609	ATXN2	78	69.279	Otolemur_garnettii
ENSAMXG00000002342	atxn2	97	69.903	ENSOARG00000018223	ATXN2	93	69.524	Ovis_aries
ENSAMXG00000002342	atxn2	97	70.323	ENSPPAG00000028043	ATXN2	93	71.478	Pan_paniscus
ENSAMXG00000002342	atxn2	96	70.297	ENSPPRG00000003573	ATXN2	93	65.292	Panthera_pardus
ENSAMXG00000002342	atxn2	97	70.164	ENSPTIG00000021122	ATXN2	93	71.134	Panthera_tigris_altaica
ENSAMXG00000002342	atxn2	95	71.930	ENSPTRG00000029540	ATXN2	93	71.478	Pan_troglodytes
ENSAMXG00000002342	atxn2	95	71.579	ENSPANG00000017168	ATXN2	93	71.134	Papio_anubis
ENSAMXG00000002342	atxn2	97	73.255	ENSPKIG00000023134	atxn2	99	74.013	Paramormyrops_kingsleyae
ENSAMXG00000002342	atxn2	97	70.358	ENSPSIG00000002353	-	93	69.968	Pelodiscus_sinensis
ENSAMXG00000002342	atxn2	95	81.786	ENSPMGG00000005074	atxn2	92	81.786	Periophthalmus_magnuspinnatus
ENSAMXG00000002342	atxn2	75	69.444	ENSPEMG00000015340	Atxn2	90	70.507	Peromyscus_maniculatus_bairdii
ENSAMXG00000002342	atxn2	59	64.574	ENSPCIG00000006165	-	89	69.312	Phascolarctos_cinereus
ENSAMXG00000002342	atxn2	97	72.853	ENSPLAG00000015241	atxn2	99	72.718	Poecilia_latipinna
ENSAMXG00000002342	atxn2	97	73.866	ENSPMEG00000016681	atxn2	99	73.592	Poecilia_mexicana
ENSAMXG00000002342	atxn2	97	72.843	ENSPREG00000014825	atxn2	92	82.230	Poecilia_reticulata
ENSAMXG00000002342	atxn2	96	70.066	ENSPPYG00000004963	ATXN2	81	69.906	Pongo_abelii
ENSAMXG00000002342	atxn2	55	79.688	ENSPCAG00000004216	-	51	54.118	Procavia_capensis
ENSAMXG00000002342	atxn2	94	69.892	ENSPCOG00000022031	ATXN2	93	69.922	Propithecus_coquereli
ENSAMXG00000002342	atxn2	96	69.967	ENSPVAG00000013179	ATXN2	77	69.592	Pteropus_vampyrus
ENSAMXG00000002342	atxn2	51	74.273	ENSPNYG00000016981	atxn2	96	73.378	Pundamilia_nyererei
ENSAMXG00000002342	atxn2	100	87.657	ENSPNAG00000010889	atxn2	99	88.383	Pygocentrus_nattereri
ENSAMXG00000002342	atxn2	89	68.489	ENSRNOG00000001256	Atxn2	93	68.671	Rattus_norvegicus
ENSAMXG00000002342	atxn2	95	69.123	ENSRBIG00000039212	ATXN2	93	68.729	Rhinopithecus_bieti
ENSAMXG00000002342	atxn2	97	70.588	ENSRROG00000031170	ATXN2	93	71.478	Rhinopithecus_roxellana
ENSAMXG00000002342	atxn2	95	71.579	ENSSBOG00000031563	ATXN2	94	71.134	Saimiri_boliviensis_boliviensis
ENSAMXG00000002342	atxn2	97	67.638	ENSSHAG00000007304	ATXN2	94	67.302	Sarcophilus_harrisii
ENSAMXG00000002342	atxn2	95	80.427	ENSSFOG00015017229	atxn2	93	80.427	Scleropages_formosus
ENSAMXG00000002342	atxn2	99	72.069	ENSSMAG00000004627	atxn2	92	83.916	Scophthalmus_maximus
ENSAMXG00000002342	atxn2	100	70.872	ENSSDUG00000001223	atxn2	99	73.532	Seriola_dumerili
ENSAMXG00000002342	atxn2	92	82.456	ENSSLDG00000019837	atxn2	93	83.929	Seriola_lalandi_dorsalis
ENSAMXG00000002342	atxn2	69	68.724	ENSSARG00000006291	ATXN2	66	68.724	Sorex_araneus
ENSAMXG00000002342	atxn2	95	68.667	ENSSPUG00000010317	ATXN2	86	68.301	Sphenodon_punctatus
ENSAMXG00000002342	atxn2	99	72.693	ENSSPAG00000000377	atxn2	99	74.296	Stegastes_partitus
ENSAMXG00000002342	atxn2	90	68.810	ENSSSCG00000009834	ATXN2	89	69.592	Sus_scrofa
ENSAMXG00000002342	atxn2	97	58.952	ENSTGUG00000006497	ATXN2	99	59.095	Taeniopygia_guttata
ENSAMXG00000002342	atxn2	100	78.198	ENSTRUG00000016801	atxn2	92	79.457	Takifugu_rubripes
ENSAMXG00000002342	atxn2	83	68.462	ENSTBEG00000001985	ATXN2	79	68.462	Tupaia_belangeri
ENSAMXG00000002342	atxn2	85	67.224	ENSTTRG00000000952	ATXN2	70	66.987	Tursiops_truncatus
ENSAMXG00000002342	atxn2	96	69.967	ENSUAMG00000025295	ATXN2	88	69.811	Ursus_americanus
ENSAMXG00000002342	atxn2	95	71.579	ENSUMAG00000007315	ATXN2	93	71.134	Ursus_maritimus
ENSAMXG00000002342	atxn2	90	65.359	ENSVPAG00000005940	ATXN2	87	65.064	Vicugna_pacos
ENSAMXG00000002342	atxn2	95	71.579	ENSVVUG00000016107	ATXN2	93	71.134	Vulpes_vulpes
ENSAMXG00000002342	atxn2	95	67.550	ENSXETG00000020912	atxn2	94	67.208	Xenopus_tropicalis
ENSAMXG00000002342	atxn2	59	64.992	ENSXCOG00000010001	atxn2	94	66.609	Xiphophorus_couchianus
ENSAMXG00000002342	atxn2	97	72.157	ENSXMAG00000003481	atxn2	99	72.823	Xiphophorus_maculatus