EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000002431 (Gene tree)
Gene ID: -
Gene Symbol: rbfox1
Alias: a2bp1|zgc:103635
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 239302 bases
Position: chr2:28365316-28604617
Accession: 103041130
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000002495	RRM_1	PF00076.22	5.4e-18	1	1
ENSAMXP00000035309	RRM_1	PF00076.22	5.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000002495	-	1029	XM_022677983	ENSAMXP00000002495	342 (aa)	XP_022533704	W5K4I4
ENSAMXT00000054825	-	1104	-	ENSAMXP00000035309	367 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000002431's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000002431's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000002431	rbfox1	56	57.212	ENSAMXG00000011451	rbfox2	62	53.659
ENSAMXG00000002431	rbfox1	72	64.542	ENSAMXG00000042841	rbfox3b	71	64.143
ENSAMXG00000002431	rbfox1	66	69.362	ENSAMXG00000037246	rbfox3a	67	70.614

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000002431	rbfox1	64	89.498	ENSG00000078328	RBFOX1	96	87.845	Homo_sapiens
ENSAMXG00000002431	rbfox1	73	77.612	ENSAPOG00000003197	rbfox1	65	77.612	Acanthochromis_polyacanthus
ENSAMXG00000002431	rbfox1	66	85.463	ENSAMEG00000008605	RBFOX1	91	85.463	Ailuropoda_melanoleuca
ENSAMXG00000002431	rbfox1	64	75.105	ENSAOCG00000008283	rbfox1	81	74.262	Amphiprion_ocellaris
ENSAMXG00000002431	rbfox1	60	70.531	ENSAPEG00000010636	rbfox1	64	67.136	Amphiprion_percula
ENSAMXG00000002431	rbfox1	73	74.444	ENSATEG00000007513	rbfox1	86	75.556	Anabas_testudineus
ENSAMXG00000002431	rbfox1	73	80.392	ENSAPLG00000013263	RBFOX1	57	88.546	Anas_platyrhynchos
ENSAMXG00000002431	rbfox1	71	76.772	ENSACAG00000004013	RBFOX1	60	79.498	Anolis_carolinensis
ENSAMXG00000002431	rbfox1	64	89.041	ENSANAG00000029527	RBFOX1	63	85.903	Aotus_nancymaae
ENSAMXG00000002431	rbfox1	65	86.667	ENSBTAG00000007210	RBFOX1	60	86.667	Bos_taurus
ENSAMXG00000002431	rbfox1	78	76.277	ENSCJAG00000017351	RBFOX1	56	89.041	Callithrix_jacchus
ENSAMXG00000002431	rbfox1	65	88.000	ENSCAFG00000019082	RBFOX1	58	87.281	Canis_familiaris
ENSAMXG00000002431	rbfox1	65	87.281	ENSCAFG00020024881	RBFOX1	64	87.281	Canis_lupus_dingo
ENSAMXG00000002431	rbfox1	65	87.111	ENSCHIG00000023549	RBFOX1	60	87.111	Capra_hircus
ENSAMXG00000002431	rbfox1	63	88.426	ENSTSYG00000005334	RBFOX1	60	88.426	Carlito_syrichta
ENSAMXG00000002431	rbfox1	72	78.656	ENSCAPG00000017669	RBFOX1	57	86.937	Cavia_aperea
ENSAMXG00000002431	rbfox1	72	78.656	ENSCPOG00000011314	RBFOX1	57	86.547	Cavia_porcellus
ENSAMXG00000002431	rbfox1	64	89.041	ENSCCAG00000023031	RBFOX1	58	89.041	Cebus_capucinus
ENSAMXG00000002431	rbfox1	64	89.498	ENSCATG00000033816	RBFOX1	64	86.147	Cercocebus_atys
ENSAMXG00000002431	rbfox1	65	87.111	ENSCLAG00000012761	RBFOX1	59	87.444	Chinchilla_lanigera
ENSAMXG00000002431	rbfox1	65	88.000	ENSCSAG00000008739	RBFOX1	60	88.000	Chlorocebus_sabaeus
ENSAMXG00000002431	rbfox1	61	86.058	ENSCHOG00000012843	RBFOX1	50	85.238	Choloepus_hoffmanni
ENSAMXG00000002431	rbfox1	73	89.558	ENSCPBG00000026626	RBFOX1	65	88.889	Chrysemys_picta_bellii
ENSAMXG00000002431	rbfox1	64	89.498	ENSCANG00000033125	RBFOX1	58	89.498	Colobus_angolensis_palliatus
ENSAMXG00000002431	rbfox1	65	87.500	ENSCGRG00001013729	Rbfox1	56	87.387	Cricetulus_griseus_chok1gshd
ENSAMXG00000002431	rbfox1	65	87.500	ENSCGRG00000003272	Rbfox1	56	87.387	Cricetulus_griseus_crigri
ENSAMXG00000002431	rbfox1	60	71.875	ENSCSEG00000008840	rbfox1	61	70.536	Cynoglossus_semilaevis
ENSAMXG00000002431	rbfox1	64	90.045	ENSDARG00000014746	rbfox1	100	90.732	Danio_rerio
ENSAMXG00000002431	rbfox1	76	77.068	ENSDNOG00000043612	RBFOX1	57	84.454	Dasypus_novemcinctus
ENSAMXG00000002431	rbfox1	78	70.758	ENSDORG00000010024	Rbfox1	61	81.013	Dipodomys_ordii
ENSAMXG00000002431	rbfox1	64	68.807	ENSETEG00000003771	RBFOX1	52	68.807	Echinops_telfairi
ENSAMXG00000002431	rbfox1	81	79.859	ENSEASG00005011599	RBFOX1	58	87.059	Equus_asinus_asinus
ENSAMXG00000002431	rbfox1	81	79.859	ENSECAG00000012667	RBFOX1	61	87.059	Equus_caballus
ENSAMXG00000002431	rbfox1	73	88.353	ENSFCAG00000025322	RBFOX1	61	88.353	Felis_catus
ENSAMXG00000002431	rbfox1	73	79.767	ENSFALG00000004027	RBFOX1	69	87.773	Ficedula_albicollis
ENSAMXG00000002431	rbfox1	72	79.447	ENSFDAG00000007388	RBFOX1	56	87.444	Fukomys_damarensis
ENSAMXG00000002431	rbfox1	96	70.361	ENSGALG00000034325	RBFOX1	95	69.330	Gallus_gallus
ENSAMXG00000002431	rbfox1	64	89.498	ENSGAGG00000023681	RBFOX1	60	88.000	Gopherus_agassizii
ENSAMXG00000002431	rbfox1	64	89.498	ENSGGOG00000016871	-	61	88.288	Gorilla_gorilla
ENSAMXG00000002431	rbfox1	65	87.111	ENSHGLG00000016944	RBFOX1	59	87.444	Heterocephalus_glaber_female
ENSAMXG00000002431	rbfox1	65	87.111	ENSHGLG00100003272	RBFOX1	59	87.444	Heterocephalus_glaber_male
ENSAMXG00000002431	rbfox1	60	78.673	ENSHCOG00000016419	rbfox1	61	78.673	Hippocampus_comes
ENSAMXG00000002431	rbfox1	73	91.200	ENSIPUG00000015215	rbfox1	65	93.578	Ictalurus_punctatus
ENSAMXG00000002431	rbfox1	71	81.377	ENSSTOG00000000322	RBFOX1	60	86.667	Ictidomys_tridecemlineatus
ENSAMXG00000002431	rbfox1	65	84.375	ENSJJAG00000002575	Rbfox1	55	84.685	Jaculus_jaculus
ENSAMXG00000002431	rbfox1	71	73.200	ENSLBEG00000014659	rbfox1	66	73.840	Labrus_bergylta
ENSAMXG00000002431	rbfox1	73	80.385	ENSLOCG00000006675	rbfox1	56	90.135	Lepisosteus_oculatus
ENSAMXG00000002431	rbfox1	64	89.041	ENSMFAG00000036447	RBFOX1	62	85.714	Macaca_fascicularis
ENSAMXG00000002431	rbfox1	64	89.041	ENSMMUG00000003458	RBFOX1	61	87.556	Macaca_mulatta
ENSAMXG00000002431	rbfox1	64	89.041	ENSMNEG00000032034	RBFOX1	55	89.041	Macaca_nemestrina
ENSAMXG00000002431	rbfox1	64	89.498	ENSMLEG00000015382	RBFOX1	58	89.498	Mandrillus_leucophaeus
ENSAMXG00000002431	rbfox1	64	73.305	ENSMAMG00000003142	rbfox1	81	73.191	Mastacembelus_armatus
ENSAMXG00000002431	rbfox1	64	90.411	ENSMGAG00000008606	RBFOX1	75	90.411	Meleagris_gallopavo
ENSAMXG00000002431	rbfox1	73	87.451	ENSMICG00000034286	RBFOX1	62	87.451	Microcebus_murinus
ENSAMXG00000002431	rbfox1	65	87.500	ENSMOCG00000020932	Rbfox1	57	88.018	Microtus_ochrogaster
ENSAMXG00000002431	rbfox1	60	81.643	ENSMMOG00000009716	rbfox1	60	81.643	Mola_mola
ENSAMXG00000002431	rbfox1	68	82.008	ENSMODG00000005826	RBFOX1	60	90.995	Monodelphis_domestica
ENSAMXG00000002431	rbfox1	73	77.099	ENSMALG00000003337	rbfox1	60	73.246	Monopterus_albus
ENSAMXG00000002431	rbfox1	65	87.946	MGP_CAROLIEiJ_G0020427	Rbfox1	56	87.838	Mus_caroli
ENSAMXG00000002431	rbfox1	65	87.500	ENSMUSG00000008658	Rbfox1	77	87.387	Mus_musculus
ENSAMXG00000002431	rbfox1	65	87.946	MGP_PahariEiJ_G0016135	Rbfox1	56	87.838	Mus_pahari
ENSAMXG00000002431	rbfox1	65	87.054	MGP_SPRETEiJ_G0021321	Rbfox1	56	86.937	Mus_spretus
ENSAMXG00000002431	rbfox1	65	88.000	ENSMPUG00000014822	RBFOX1	58	87.281	Mustela_putorius_furo
ENSAMXG00000002431	rbfox1	65	88.000	ENSNGAG00000023276	Rbfox1	57	88.288	Nannospalax_galili
ENSAMXG00000002431	rbfox1	59	67.130	ENSNBRG00000011084	rbfox1	51	65.899	Neolamprologus_brichardi
ENSAMXG00000002431	rbfox1	64	89.041	ENSNLEG00000010017	-	58	89.041	Nomascus_leucogenys
ENSAMXG00000002431	rbfox1	64	89.189	ENSMEUG00000012525	RBFOX1	53	89.189	Notamacropus_eugenii
ENSAMXG00000002431	rbfox1	67	85.043	ENSOPRG00000006199	-	56	85.043	Ochotona_princeps
ENSAMXG00000002431	rbfox1	72	77.866	ENSODEG00000013166	RBFOX1	57	85.268	Octodon_degus
ENSAMXG00000002431	rbfox1	72	81.028	ENSOANG00000002379	RBFOX1	60	89.333	Ornithorhynchus_anatinus
ENSAMXG00000002431	rbfox1	63	87.097	ENSOCUG00000001205	-	96	87.097	Oryctolagus_cuniculus
ENSAMXG00000002431	rbfox1	71	79.283	ENSOGAG00000025535	RBFOX1	56	87.444	Otolemur_garnettii
ENSAMXG00000002431	rbfox1	65	73.568	ENSOARG00000005135	RBFOX1	90	73.568	Ovis_aries
ENSAMXG00000002431	rbfox1	63	89.815	ENSPPAG00000036238	-	60	89.815	Pan_paniscus
ENSAMXG00000002431	rbfox1	64	89.041	ENSPPRG00000006546	RBFOX1	60	87.168	Panthera_pardus
ENSAMXG00000002431	rbfox1	64	85.650	ENSPTIG00000021154	RBFOX1	62	85.586	Panthera_tigris_altaica
ENSAMXG00000002431	rbfox1	64	89.498	ENSPTRG00000007744	RBFOX1	58	89.498	Pan_troglodytes
ENSAMXG00000002431	rbfox1	64	89.498	ENSPANG00000026500	RBFOX1	64	86.147	Papio_anubis
ENSAMXG00000002431	rbfox1	89	78.507	ENSPKIG00000019353	rbfox1	100	78.209	Paramormyrops_kingsleyae
ENSAMXG00000002431	rbfox1	73	86.454	ENSPKIG00000009667	-	64	87.892	Paramormyrops_kingsleyae
ENSAMXG00000002431	rbfox1	72	80.632	ENSPSIG00000006523	RBFOX1	56	88.889	Pelodiscus_sinensis
ENSAMXG00000002431	rbfox1	65	87.946	ENSPEMG00000017607	Rbfox1	56	87.838	Peromyscus_maniculatus_bairdii
ENSAMXG00000002431	rbfox1	65	88.000	ENSPPYG00000007079	-	57	88.000	Pongo_abelii
ENSAMXG00000002431	rbfox1	71	71.660	ENSPCAG00000002630	RBFOX1	65	71.660	Procavia_capensis
ENSAMXG00000002431	rbfox1	64	89.498	ENSPCOG00000025687	RBFOX1	60	88.889	Propithecus_coquereli
ENSAMXG00000002431	rbfox1	72	77.470	ENSPVAG00000013467	RBFOX1	55	84.649	Pteropus_vampyrus
ENSAMXG00000002431	rbfox1	60	90.625	ENSPNAG00000023109	rbfox1	61	90.625	Pygocentrus_nattereri
ENSAMXG00000002431	rbfox1	65	87.500	ENSRNOG00000002827	Rbfox1	60	87.500	Rattus_norvegicus
ENSAMXG00000002431	rbfox1	65	88.000	ENSRBIG00000044478	RBFOX1	60	89.815	Rhinopithecus_bieti
ENSAMXG00000002431	rbfox1	64	89.498	ENSRROG00000044411	RBFOX1	66	88.000	Rhinopithecus_roxellana
ENSAMXG00000002431	rbfox1	64	89.041	ENSSBOG00000033726	RBFOX1	58	89.041	Saimiri_boliviensis_boliviensis
ENSAMXG00000002431	rbfox1	64	89.189	ENSSHAG00000009257	RBFOX1	63	92.683	Sarcophilus_harrisii
ENSAMXG00000002431	rbfox1	67	72.034	ENSSFOG00015009955	-	60	72.340	Scleropages_formosus
ENSAMXG00000002431	rbfox1	69	84.426	ENSSFOG00015023675	rbfox1	71	84.426	Scleropages_formosus
ENSAMXG00000002431	rbfox1	73	77.820	ENSSMAG00000015505	rbfox1	68	77.820	Scophthalmus_maximus
ENSAMXG00000002431	rbfox1	63	79.186	ENSSDUG00000016413	rbfox1	64	77.778	Seriola_dumerili
ENSAMXG00000002431	rbfox1	73	77.239	ENSSLDG00000009353	rbfox1	78	77.239	Seriola_lalandi_dorsalis
ENSAMXG00000002431	rbfox1	60	90.865	ENSSPUG00000009732	RBFOX1	59	90.865	Sphenodon_punctatus
ENSAMXG00000002431	rbfox1	63	80.822	ENSSPAG00000009723	rbfox1	61	80.180	Stegastes_partitus
ENSAMXG00000002431	rbfox1	65	85.965	ENSSSCG00000007917	RBFOX1	60	88.626	Sus_scrofa
ENSAMXG00000002431	rbfox1	71	80.876	ENSTGUG00000004562	RBFOX1	57	89.238	Taeniopygia_guttata
ENSAMXG00000002431	rbfox1	64	77.637	ENSTRUG00000020940	rbfox1	66	77.637	Takifugu_rubripes
ENSAMXG00000002431	rbfox1	72	78.656	ENSTTRG00000005700	RBFOX1	55	85.965	Tursiops_truncatus
ENSAMXG00000002431	rbfox1	66	87.611	ENSUAMG00000024633	RBFOX1	64	87.611	Ursus_americanus
ENSAMXG00000002431	rbfox1	65	87.281	ENSUMAG00000003579	RBFOX1	64	87.281	Ursus_maritimus
ENSAMXG00000002431	rbfox1	87	76.524	ENSVVUG00000017311	RBFOX1	95	76.524	Vulpes_vulpes