EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000002483 (Gene tree)
Gene ID: 103026817
Gene Symbol: hnrnph1
Alias: zgc:77712
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 7293 bases
Position: chr24:1863176-1870468
Accession: 103026817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000005848	zf-RNPHF	PF08080.12	7.1e-07	1	1
ENSAMXP00000028106	zf-RNPHF	PF08080.12	7.7e-07	1	1
ENSAMXP00000028106	RRM_1	PF00076.22	5.3e-32	1	3
ENSAMXP00000028106	RRM_1	PF00076.22	5.3e-32	2	3
ENSAMXP00000028106	RRM_1	PF00076.22	5.3e-32	3	3
ENSAMXP00000005848	RRM_1	PF00076.22	7.4e-32	1	3
ENSAMXP00000005848	RRM_1	PF00076.22	7.4e-32	2	3
ENSAMXP00000005848	RRM_1	PF00076.22	7.4e-32	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000005848	-	1246	XM_007229883	ENSAMXP00000005848	409 (aa)	XP_007229945	W5KE37
ENSAMXT00000054636	-	2144	XM_007229885	ENSAMXP00000028106	380 (aa)	XP_007229947	-

Gene Model

Click here to download ENSAMXG00000002483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000002483's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000002483	hnrnph1	98	58.038	ENSAMXG00000021323	hnrnph3	92	60.165
ENSAMXG00000002483	hnrnph1	99	86.544	ENSAMXG00000030703	hnrnph1l	85	81.884
ENSAMXG00000002483	hnrnph1	87	40.303	ENSAMXG00000012270	grsf1	99	40.432

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000002483	hnrnph1	99	89.182	ENSAPOG00000016614	hnrnph1	100	84.223	Acanthochromis_polyacanthus
ENSAMXG00000002483	hnrnph1	100	88.512	ENSACIG00000008964	hnrnph1	99	87.990	Amphilophus_citrinellus
ENSAMXG00000002483	hnrnph1	99	89.182	ENSAOCG00000008372	hnrnph1	100	84.466	Amphiprion_ocellaris
ENSAMXG00000002483	hnrnph1	99	88.918	ENSAPEG00000012980	hnrnph1	100	84.223	Amphiprion_percula
ENSAMXG00000002483	hnrnph1	99	88.918	ENSATEG00000002792	hnrnph1	100	84.223	Anabas_testudineus
ENSAMXG00000002483	hnrnph1	99	73.684	ENSACAG00000016323	-	98	71.523	Anolis_carolinensis
ENSAMXG00000002483	hnrnph1	89	86.872	ENSACLG00000003313	hnrnph1	92	87.135	Astatotilapia_calliptera
ENSAMXG00000002483	hnrnph1	99	88.918	ENSCSEG00000015891	hnrnph1	100	86.408	Cynoglossus_semilaevis
ENSAMXG00000002483	hnrnph1	99	87.863	ENSCVAG00000014097	hnrnph1	100	83.010	Cyprinodon_variegatus
ENSAMXG00000002483	hnrnph1	100	95.263	ENSDARG00000040881	hnrnph1	100	90.754	Danio_rerio
ENSAMXG00000002483	hnrnph1	99	88.947	ENSDARG00000005551	hnrnph1l	100	85.437	Danio_rerio
ENSAMXG00000002483	hnrnph1	99	85.752	ENSELUG00000021437	-	99	88.127	Esox_lucius
ENSAMXG00000002483	hnrnph1	100	83.607	ENSELUG00000006715	hnrnph1	94	84.439	Esox_lucius
ENSAMXG00000002483	hnrnph1	99	87.335	ENSFHEG00000008474	hnrnph1	100	82.767	Fundulus_heteroclitus
ENSAMXG00000002483	hnrnph1	99	82.957	ENSGMOG00000006782	hnrnph1	98	80.952	Gadus_morhua
ENSAMXG00000002483	hnrnph1	99	88.127	ENSGAFG00000006280	hnrnph1	100	83.252	Gambusia_affinis
ENSAMXG00000002483	hnrnph1	100	84.108	ENSGACG00000018352	hnrnph1	99	81.174	Gasterosteus_aculeatus
ENSAMXG00000002483	hnrnph1	89	86.872	ENSHBUG00000010547	hnrnph1	93	87.135	Haplochromis_burtoni
ENSAMXG00000002483	hnrnph1	100	76.581	ENSHCOG00000004513	hnrnph1	100	77.882	Hippocampus_comes
ENSAMXG00000002483	hnrnph1	100	95.599	ENSIPUG00000018262	hnrnph1	100	95.599	Ictalurus_punctatus
ENSAMXG00000002483	hnrnph1	99	84.697	ENSIPUG00000024047	hnrnph1l	97	79.759	Ictalurus_punctatus
ENSAMXG00000002483	hnrnph1	99	86.911	ENSKMAG00000018802	hnrnph1	100	82.169	Kryptolebias_marmoratus
ENSAMXG00000002483	hnrnph1	99	88.127	ENSLBEG00000027811	hnrnph1	100	83.495	Labrus_bergylta
ENSAMXG00000002483	hnrnph1	99	81.818	ENSLOCG00000012510	hnrnph1	92	80.835	Lepisosteus_oculatus
ENSAMXG00000002483	hnrnph1	99	54.861	ENSMMUG00000017392	-	98	51.376	Macaca_mulatta
ENSAMXG00000002483	hnrnph1	99	54.861	ENSMNEG00000030544	-	98	51.376	Macaca_nemestrina
ENSAMXG00000002483	hnrnph1	92	83.914	ENSMAMG00000011478	hnrnph1	94	84.943	Mastacembelus_armatus
ENSAMXG00000002483	hnrnph1	99	89.182	ENSMZEG00005009791	hnrnph1	100	84.223	Maylandia_zebra
ENSAMXG00000002483	hnrnph1	100	86.305	ENSMMOG00000009064	hnrnph1	99	86.047	Mola_mola
ENSAMXG00000002483	hnrnph1	79	53.153	ENSMODG00000002200	-	99	50.751	Monodelphis_domestica
ENSAMXG00000002483	hnrnph1	90	86.704	ENSMALG00000003999	hnrnph1	95	86.087	Monopterus_albus
ENSAMXG00000002483	hnrnph1	89	86.872	ENSNBRG00000015406	hnrnph1	93	87.135	Neolamprologus_brichardi
ENSAMXG00000002483	hnrnph1	99	88.918	ENSONIG00000017754	hnrnph1	100	83.981	Oreochromis_niloticus
ENSAMXG00000002483	hnrnph1	99	86.494	ENSORLG00000006932	hnrnph1	100	81.579	Oryzias_latipes
ENSAMXG00000002483	hnrnph1	99	86.494	ENSORLG00020007881	hnrnph1	100	81.340	Oryzias_latipes_hni
ENSAMXG00000002483	hnrnph1	99	86.494	ENSORLG00015005306	hnrnph1	100	81.579	Oryzias_latipes_hsok
ENSAMXG00000002483	hnrnph1	99	88.158	ENSOMEG00000009827	hnrnph1	99	87.599	Oryzias_melastigma
ENSAMXG00000002483	hnrnph1	99	90.237	ENSPKIG00000018203	hnrnph1l	100	87.591	Paramormyrops_kingsleyae
ENSAMXG00000002483	hnrnph1	99	83.042	ENSPKIG00000009532	-	100	80.415	Paramormyrops_kingsleyae
ENSAMXG00000002483	hnrnph1	99	87.599	ENSPMGG00000012151	hnrnph1	100	83.252	Periophthalmus_magnuspinnatus
ENSAMXG00000002483	hnrnph1	100	87.306	ENSPFOG00000004097	hnrnph1	100	83.252	Poecilia_formosa
ENSAMXG00000002483	hnrnph1	99	88.127	ENSPLAG00000011771	hnrnph1	100	83.252	Poecilia_latipinna
ENSAMXG00000002483	hnrnph1	99	88.391	ENSPMEG00000019446	hnrnph1	100	83.495	Poecilia_mexicana
ENSAMXG00000002483	hnrnph1	99	88.391	ENSPREG00000005780	hnrnph1	100	83.495	Poecilia_reticulata
ENSAMXG00000002483	hnrnph1	99	89.182	ENSPNYG00000000204	hnrnph1	100	84.223	Pundamilia_nyererei
ENSAMXG00000002483	hnrnph1	99	87.599	ENSPNAG00000002784	hnrnph1l	100	82.651	Pygocentrus_nattereri
ENSAMXG00000002483	hnrnph1	100	98.778	ENSPNAG00000000439	hnrnph1	100	98.778	Pygocentrus_nattereri
ENSAMXG00000002483	hnrnph1	99	90.501	ENSSFOG00015022796	hnrnph1l	100	89.078	Scleropages_formosus
ENSAMXG00000002483	hnrnph1	99	90.237	ENSSFOG00015016055	-	94	89.764	Scleropages_formosus
ENSAMXG00000002483	hnrnph1	100	83.663	ENSSMAG00000007820	hnrnph1	97	86.375	Scophthalmus_maximus
ENSAMXG00000002483	hnrnph1	99	89.182	ENSSDUG00000008785	hnrnph1	100	84.466	Seriola_dumerili
ENSAMXG00000002483	hnrnph1	99	89.182	ENSSLDG00000010685	hnrnph1	100	84.466	Seriola_lalandi_dorsalis
ENSAMXG00000002483	hnrnph1	99	88.918	ENSSPAG00000009921	hnrnph1	100	84.466	Stegastes_partitus
ENSAMXG00000002483	hnrnph1	99	89.096	ENSTRUG00000020069	hnrnph1	100	84.841	Takifugu_rubripes
ENSAMXG00000002483	hnrnph1	97	76.250	ENSXETG00000018321	hnrnph1	99	70.968	Xenopus_tropicalis
ENSAMXG00000002483	hnrnph1	99	84.887	ENSXCOG00000009133	hnrnph1	98	83.417	Xiphophorus_couchianus
ENSAMXG00000002483	hnrnph1	100	88.251	ENSXMAG00000021332	hnrnph1	99	88.127	Xiphophorus_maculatus