EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000002534 (Gene tree)
Gene ID: 103028794
Gene Symbol: rad18
Alias: zgc:55577
Full Name: RAD18%2C E3 ubiquitin protein ligase
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 101354 bases
Position: chr13:34920173-35021526
Accession: 103028794
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000002598	SAP	PF02037.27	1.2e-09	1	1
ENSAMXP00000030695	SAP	PF02037.27	1.5e-09	1	1
ENSAMXP00000042835	SAP	PF02037.27	1.6e-09	1	1
ENSAMXP00000042907	SAP	PF02037.27	1.6e-09	1	1
ENSAMXP00000049417	SAP	PF02037.27	1.6e-09	1	1
ENSAMXP00000052527	SAP	PF02037.27	1.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000042057	-	4900	-	ENSAMXP00000049417	448 (aa)	-	UPI000BBD57FA
ENSAMXT00000002598	-	1206	-	ENSAMXP00000002598	401 (aa)	-	W5K4T7
ENSAMXT00000052830	-	4018	-	ENSAMXP00000042907	448 (aa)	-	UPI000BBD57FA
ENSAMXT00000044301	-	4855	XM_022675717	ENSAMXP00000030695	433 (aa)	XP_022531438	UPI000BBDCA46
ENSAMXT00000050807	-	2487	XM_007254373	ENSAMXP00000052527	449 (aa)	XP_007254435	UPI000BBDEE97
ENSAMXT00000049256	-	2530	XM_007254374	ENSAMXP00000042835	448 (aa)	XP_007254436	UPI000BBD57FA

Gene Model

Click here to download ENSAMXG00000002534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000002534's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000002534	rad18	92	41.032	ENSG00000070950	RAD18	99	60.000	Homo_sapiens
ENSAMXG00000002534	rad18	98	52.747	ENSAPOG00000005260	rad18	90	51.599	Acanthochromis_polyacanthus
ENSAMXG00000002534	rad18	81	43.968	ENSAMEG00000012375	RAD18	63	43.968	Ailuropoda_melanoleuca
ENSAMXG00000002534	rad18	82	47.765	ENSACIG00000020655	rad18	88	48.248	Amphilophus_citrinellus
ENSAMXG00000002534	rad18	88	53.350	ENSAOCG00000004507	rad18	93	51.059	Amphiprion_ocellaris
ENSAMXG00000002534	rad18	88	53.117	ENSAPEG00000016837	rad18	100	50.638	Amphiprion_percula
ENSAMXG00000002534	rad18	83	43.085	ENSAPLG00000003138	RAD18	77	43.085	Anas_platyrhynchos
ENSAMXG00000002534	rad18	92	40.786	ENSANAG00000033360	RAD18	79	43.392	Aotus_nancymaae
ENSAMXG00000002534	rad18	98	52.308	ENSACLG00000023506	rad18	98	50.743	Astatotilapia_calliptera
ENSAMXG00000002534	rad18	92	42.410	ENSBTAG00000012142	RAD18	88	42.651	Bos_taurus
ENSAMXG00000002534	rad18	92	39.803	ENSCJAG00000040303	RAD18	83	39.803	Callithrix_jacchus
ENSAMXG00000002534	rad18	94	41.109	ENSCAFG00000005548	RAD18	80	43.961	Canis_familiaris
ENSAMXG00000002534	rad18	94	41.109	ENSCAFG00020009228	RAD18	80	43.961	Canis_lupus_dingo
ENSAMXG00000002534	rad18	90	41.058	ENSCHIG00000007965	RAD18	94	46.622	Capra_hircus
ENSAMXG00000002534	rad18	88	42.500	ENSTSYG00000012189	RAD18	79	42.500	Carlito_syrichta
ENSAMXG00000002534	rad18	83	39.247	ENSCAPG00000000356	RAD18	84	38.338	Cavia_aperea
ENSAMXG00000002534	rad18	81	43.923	ENSCPOG00000013890	RAD18	72	42.975	Cavia_porcellus
ENSAMXG00000002534	rad18	92	41.176	ENSCCAG00000022920	RAD18	79	43.596	Cebus_capucinus
ENSAMXG00000002534	rad18	92	41.278	ENSCATG00000039277	RAD18	81	41.278	Cercocebus_atys
ENSAMXG00000002534	rad18	90	42.636	ENSCLAG00000003652	RAD18	75	44.648	Chinchilla_lanigera
ENSAMXG00000002534	rad18	92	41.523	ENSCSAG00000010783	RAD18	78	41.769	Chlorocebus_sabaeus
ENSAMXG00000002534	rad18	91	43.552	ENSCPBG00000014787	RAD18	86	43.552	Chrysemys_picta_bellii
ENSAMXG00000002534	rad18	92	41.523	ENSCANG00000007308	RAD18	79	41.523	Colobus_angolensis_palliatus
ENSAMXG00000002534	rad18	92	42.543	ENSCGRG00001018154	-	84	42.932	Cricetulus_griseus_chok1gshd
ENSAMXG00000002534	rad18	98	38.876	ENSCGRG00001010209	-	81	43.204	Cricetulus_griseus_chok1gshd
ENSAMXG00000002534	rad18	92	42.543	ENSCGRG00000007283	-	84	42.932	Cricetulus_griseus_crigri
ENSAMXG00000002534	rad18	98	39.110	ENSCGRG00000019636	-	81	43.447	Cricetulus_griseus_crigri
ENSAMXG00000002534	rad18	100	53.796	ENSCSEG00000002516	rad18	94	53.333	Cynoglossus_semilaevis
ENSAMXG00000002534	rad18	99	66.129	ENSDARG00000027938	rad18	97	65.796	Danio_rerio
ENSAMXG00000002534	rad18	97	39.474	ENSDNOG00000040055	RAD18	81	42.754	Dasypus_novemcinctus
ENSAMXG00000002534	rad18	96	41.031	ENSDORG00000001099	Rad18	86	40.708	Dipodomys_ordii
ENSAMXG00000002534	rad18	71	40.798	ENSETEG00000002268	RAD18	71	40.798	Echinops_telfairi
ENSAMXG00000002534	rad18	92	40.148	ENSEASG00005013316	RAD18	73	43.781	Equus_asinus_asinus
ENSAMXG00000002534	rad18	92	40.148	ENSECAG00000010746	RAD18	76	43.781	Equus_caballus
ENSAMXG00000002534	rad18	99	51.434	ENSELUG00000000733	rad18	97	49.595	Esox_lucius
ENSAMXG00000002534	rad18	94	41.981	ENSFCAG00000025747	RAD18	81	43.026	Felis_catus
ENSAMXG00000002534	rad18	97	40.363	ENSFALG00000013625	RAD18	84	43.421	Ficedula_albicollis
ENSAMXG00000002534	rad18	92	40.648	ENSFDAG00000009907	RAD18	77	43.291	Fukomys_damarensis
ENSAMXG00000002534	rad18	91	42.469	ENSGALG00000008368	RAD18	80	42.857	Gallus_gallus
ENSAMXG00000002534	rad18	87	58.108	ENSGACG00000000920	rad18	97	53.880	Gasterosteus_aculeatus
ENSAMXG00000002534	rad18	87	41.623	ENSGAGG00000005184	RAD18	81	42.147	Gopherus_agassizii
ENSAMXG00000002534	rad18	92	41.523	ENSGGOG00000008391	RAD18	79	44.665	Gorilla_gorilla
ENSAMXG00000002534	rad18	98	48.706	ENSHBUG00000013322	rad18	100	47.166	Haplochromis_burtoni
ENSAMXG00000002534	rad18	74	45.307	ENSHGLG00000009196	-	96	45.307	Heterocephalus_glaber_female
ENSAMXG00000002534	rad18	74	45.307	ENSHGLG00100017675	-	96	45.307	Heterocephalus_glaber_male
ENSAMXG00000002534	rad18	100	70.510	ENSIPUG00000018681	rad18	100	70.510	Ictalurus_punctatus
ENSAMXG00000002534	rad18	75	44.695	ENSSTOG00000004870	-	97	46.278	Ictidomys_tridecemlineatus
ENSAMXG00000002534	rad18	82	45.479	ENSJJAG00000001484	Rad18	79	45.355	Jaculus_jaculus
ENSAMXG00000002534	rad18	89	56.543	ENSKMAG00000020725	rad18	90	52.700	Kryptolebias_marmoratus
ENSAMXG00000002534	rad18	70	42.244	ENSLACG00000018437	RAD18	95	42.244	Latimeria_chalumnae
ENSAMXG00000002534	rad18	96	49.531	ENSLOCG00000010629	rad18	99	49.247	Lepisosteus_oculatus
ENSAMXG00000002534	rad18	82	45.553	ENSLAFG00000004667	RAD18	75	45.553	Loxodonta_africana
ENSAMXG00000002534	rad18	92	41.278	ENSMFAG00000028864	RAD18	79	41.523	Macaca_fascicularis
ENSAMXG00000002534	rad18	92	41.278	ENSMMUG00000020013	RAD18	97	46.349	Macaca_mulatta
ENSAMXG00000002534	rad18	92	41.278	ENSMNEG00000013464	RAD18	79	41.523	Macaca_nemestrina
ENSAMXG00000002534	rad18	92	40.876	ENSMLEG00000014306	RAD18	79	41.119	Mandrillus_leucophaeus
ENSAMXG00000002534	rad18	85	49.875	ENSMAMG00000023936	rad18	90	50.112	Mastacembelus_armatus
ENSAMXG00000002534	rad18	93	51.559	ENSMZEG00005010577	rad18	84	50.213	Maylandia_zebra
ENSAMXG00000002534	rad18	86	41.710	ENSMGAG00000010131	RAD18	80	41.710	Meleagris_gallopavo
ENSAMXG00000002534	rad18	87	43.523	ENSMAUG00000020642	Rad18	84	43.523	Mesocricetus_auratus
ENSAMXG00000002534	rad18	93	35.422	ENSMICG00000013536	RAD18	78	40.506	Microcebus_murinus
ENSAMXG00000002534	rad18	89	43.045	ENSMOCG00000009114	Rad18	78	45.506	Microtus_ochrogaster
ENSAMXG00000002534	rad18	82	53.482	ENSMMOG00000021793	rad18	97	53.117	Mola_mola
ENSAMXG00000002534	rad18	89	38.860	ENSMODG00000004679	RAD18	74	42.487	Monodelphis_domestica
ENSAMXG00000002534	rad18	96	40.426	MGP_CAROLIEiJ_G0028712	Rad18	96	46.667	Mus_caroli
ENSAMXG00000002534	rad18	89	41.602	ENSMUSG00000030254	Rad18	96	45.806	Mus_musculus
ENSAMXG00000002534	rad18	92	42.092	MGP_PahariEiJ_G0022463	Rad18	96	46.078	Mus_pahari
ENSAMXG00000002534	rad18	96	40.793	MGP_SPRETEiJ_G0029740	Rad18	96	46.129	Mus_spretus
ENSAMXG00000002534	rad18	94	41.628	ENSMPUG00000017063	RAD18	81	42.791	Mustela_putorius_furo
ENSAMXG00000002534	rad18	82	44.142	ENSMLUG00000016494	RAD18	70	45.580	Myotis_lucifugus
ENSAMXG00000002534	rad18	88	43.188	ENSNGAG00000012464	Rad18	89	43.188	Nannospalax_galili
ENSAMXG00000002534	rad18	82	48.588	ENSNBRG00000004794	rad18	97	48.907	Neolamprologus_brichardi
ENSAMXG00000002534	rad18	92	41.626	ENSNLEG00000003789	RAD18	80	41.872	Nomascus_leucogenys
ENSAMXG00000002534	rad18	63	43.985	ENSMEUG00000003444	-	61	43.985	Notamacropus_eugenii
ENSAMXG00000002534	rad18	85	42.318	ENSOPRG00000013856	RAD18	73	46.486	Ochotona_princeps
ENSAMXG00000002534	rad18	74	44.695	ENSODEG00000018158	RAD18	96	46.753	Octodon_degus
ENSAMXG00000002534	rad18	99	53.318	ENSONIG00000018979	rad18	98	52.477	Oreochromis_niloticus
ENSAMXG00000002534	rad18	82	45.040	ENSOCUG00000000013	RAD18	71	46.649	Oryctolagus_cuniculus
ENSAMXG00000002534	rad18	82	49.582	ENSORLG00000029026	rad18	96	49.865	Oryzias_latipes
ENSAMXG00000002534	rad18	92	39.954	ENSOGAG00000001410	RAD18	71	45.628	Otolemur_garnettii
ENSAMXG00000002534	rad18	97	39.294	ENSOARG00000007445	RAD18	79	40.146	Ovis_aries
ENSAMXG00000002534	rad18	92	41.032	ENSPPAG00000035797	RAD18	80	41.769	Pan_paniscus
ENSAMXG00000002534	rad18	94	42.080	ENSPPRG00000004021	RAD18	81	43.128	Panthera_pardus
ENSAMXG00000002534	rad18	94	41.943	ENSPTIG00000008602	RAD18	81	43.128	Panthera_tigris_altaica
ENSAMXG00000002534	rad18	92	41.032	ENSPTRG00000014583	RAD18	79	44.169	Pan_troglodytes
ENSAMXG00000002534	rad18	92	41.278	ENSPANG00000008855	RAD18	79	41.523	Papio_anubis
ENSAMXG00000002534	rad18	94	41.204	ENSPSIG00000006928	RAD18	88	39.530	Pelodiscus_sinensis
ENSAMXG00000002534	rad18	80	57.055	ENSPMGG00000013294	rad18	95	56.535	Periophthalmus_magnuspinnatus
ENSAMXG00000002534	rad18	92	41.570	ENSPEMG00000022129	Rad18	85	41.570	Peromyscus_maniculatus_bairdii
ENSAMXG00000002534	rad18	94	40.092	ENSPCIG00000024872	RAD18	91	40.092	Phascolarctos_cinereus
ENSAMXG00000002534	rad18	82	53.090	ENSPFOG00000002722	rad18	98	53.369	Poecilia_formosa
ENSAMXG00000002534	rad18	89	44.444	ENSPPYG00000013688	RAD18	80	41.119	Pongo_abelii
ENSAMXG00000002534	rad18	90	31.514	ENSPCAG00000008229	RAD18	86	31.514	Procavia_capensis
ENSAMXG00000002534	rad18	88	42.172	ENSPVAG00000012220	RAD18	78	43.655	Pteropus_vampyrus
ENSAMXG00000002534	rad18	99	48.262	ENSPNYG00000006815	rad18	91	50.107	Pundamilia_nyererei
ENSAMXG00000002534	rad18	100	80.488	ENSPNAG00000016082	rad18	100	80.488	Pygocentrus_nattereri
ENSAMXG00000002534	rad18	92	42.619	ENSRNOG00000005907	Rad18	83	43.468	Rattus_norvegicus
ENSAMXG00000002534	rad18	92	40.686	ENSRBIG00000044173	RAD18	79	40.931	Rhinopithecus_bieti
ENSAMXG00000002534	rad18	92	41.523	ENSRROG00000043948	RAD18	79	41.769	Rhinopithecus_roxellana
ENSAMXG00000002534	rad18	92	40.295	ENSSBOG00000008434	-	80	40.295	Saimiri_boliviensis_boliviensis
ENSAMXG00000002534	rad18	87	37.368	ENSSHAG00000012472	-	92	39.842	Sarcophilus_harrisii
ENSAMXG00000002534	rad18	97	53.708	ENSSFOG00015019264	rad18	94	52.298	Scleropages_formosus
ENSAMXG00000002534	rad18	73	48.173	ENSSPUG00000017486	RAD18	96	48.173	Sphenodon_punctatus
ENSAMXG00000002534	rad18	87	55.303	ENSSPAG00000007165	rad18	92	52.411	Stegastes_partitus
ENSAMXG00000002534	rad18	93	39.066	ENSSSCG00000026158	RAD18	77	42.677	Sus_scrofa
ENSAMXG00000002534	rad18	93	41.080	ENSTGUG00000010405	RAD18	93	41.080	Taeniopygia_guttata
ENSAMXG00000002534	rad18	82	52.161	ENSTRUG00000003517	rad18	100	52.925	Takifugu_rubripes
ENSAMXG00000002534	rad18	85	53.444	ENSTNIG00000014625	rad18	100	55.647	Tetraodon_nigroviridis
ENSAMXG00000002534	rad18	92	41.527	ENSTTRG00000005034	RAD18	82	41.787	Tursiops_truncatus
ENSAMXG00000002534	rad18	94	41.805	ENSUMAG00000019279	RAD18	80	43.269	Ursus_maritimus
ENSAMXG00000002534	rad18	92	38.350	ENSVPAG00000002063	RAD18	85	40.988	Vicugna_pacos
ENSAMXG00000002534	rad18	99	40.659	ENSVVUG00000025318	RAD18	83	43.133	Vulpes_vulpes
ENSAMXG00000002534	rad18	80	41.209	ENSXETG00000033878	RAD18	94	42.340	Xenopus_tropicalis
ENSAMXG00000002534	rad18	82	47.765	ENSXCOG00000020018	rad18	95	48.649	Xiphophorus_couchianus
ENSAMXG00000002534	rad18	82	48.324	ENSXMAG00000001516	rad18	95	49.189	Xiphophorus_maculatus